PDWallMech: Harnessing PlasmoDesma Wall Mechanics for plant biotech and biomaterials

Lead Research Organisation: University of Leeds
Department Name: Astbury Centre

Abstract

Plant cells communicate with each other despite the rigid cell wall surrounding them. Communication is essential to coordinate development and responses to environmental inputs perceived locally or in distant organs. Some small molecules can move freely between cells using cell specific transport machineries. Cell walls limit diffusion of larger molecules, such as proteins and RNAs, however these can move via small channels that connect the insides of neighboring cells known as Plasmodesmata (singular, plasmodesma). Plasmodesmata function impacts all aspects of plant growth and development, including spreading of diseases, capacity to exploit soils resources, adaptation and survival to climatic changes. Despite their fundamental importance to all forms of plant life, we know very little about plasmodesmata and consequently this is one of the most promising but least exploited targets when developing new strategies to improve crop growth and resilience to climate change. The work that will be carried out in this project will fill key knowledge gaps on plasmodesmata, such as how different components in the surrounding cell walls affects plasmodesmata structural organization and function in different plants, cells and tissues. The mechanical properties of cell wall components affecting plasmodesmata function will be analysed to identify genes that can be targeted to modify intercellular communication, plant growth and environmental resilience. I will develop plant-type specific platforms that allow exploitation of plasmodesmata knowledge for the improvement of desirable crop traits, thus addressing their untapped potential to modify root branching (to improve access to water and nutrients uptake in depleted soils), resistance to viruses (plasmodesmata serve as a conduit for virus spreading) or the response to toxic metals and other abiotic stress conditions, through modulating intercellular signalling. At the end of the program the goal is to have novel, accessible tools to modify plasmodesmata in a targeted and specific manner that allow the design of strategies to mitigate the effects of climate change on plant growth, thus agricultural sustainability and food security, in a wide range of plant species including food crops such as wheat and tomato. Complementary to the fundamental work, the properties of cell walls controlling plasmodesmata will be exploited in the design of new products, such as novel biomaterials. The project, which integrates plant biomechanics, biotechnology and material engineering, has a wide range of outputs and impacts, thus offering maximal societal and economic benefits. The Fellowship will deliver crucial knowledge for the development of novel applications in the biopolymer and bioplastic sector and in crop biotechnology strengthening the UK's leading position worldwide in industrial biotechnology. Knowledge translation also addresses global priorities to ensure food security for a growing global population and to discover new resources to manufacture products with green credentials for sustainable living.

Planned Impact

The project will generate new strategies to improve plant growth and new biomaterials derived from cell wall polymers. It will advance knowledge on plasmodesmata (PD) and unravel factors affecting PD function in coordinating responses to developmental and environmental cues. It will impact plant biotechnologists, breeders and synthetic engineers which can use the information in the design of strategies for improvement of crop growth, responses to adverse environments and to engineer the production of high value plant biopolymers. Translation of knowledge from this Fellowship will in the longer-term support growth in UK agriculture which currently produces ~60% of food needs and underpin progress on BBSRC strategic priority on 'Food security'. Increased understanding on the physics of biopolymers will reveal information for industrial application as bioplastics and biomaterials responding to RC calls for valorisation of natural resources and also to the grand challenge area 'Understanding the physics of life' and 'manufacturing the future'. In the UK alone over eight million tonnes of unused agricultural residues are generated which can be a valuable source for biopolymers. New applications for plant biopolymers will support the UK manufacturing sector which contributes £6.7 trillion to the global economy (themanufacturer.com) and support growth in the biopolymer/ bioplastic sector which is predicted to contribute £1.92 billion to the UK economy in the next decade (biomebioplastics.com). Innovations of this nature will attract considerable international interest, industrial investments and strengthen the UK's leader position in industrial biotechnology. In brief, in the short term (4 years) major beneficiaries are:
- The UK workforce, through developing highly skilled people in multidisciplinary and translational research. Interdisciplinarity at the Bioscience-Physic interface is highlighted as strategically important and vulnerable area in the latest BBSRC/MRC report. The project targets this skill area, increasing the employability of the staff involved and their transferrable skills.
- The UK economy and international industrial scientific community by identifying new factors affecting plant growth and new biopolymers for novel biomaterials. UK rain fed crops, such as wheat, are at risk because the greater inter-annual variability in climate. New diseases (such as the tomato chlorosis virus) have also negative impacts on the UK economy. The project will identify new genes to target PD (a path for signaling and virus spreading) in wheat and tomato, providing new strategies for crop improvement through breeding and/or biotechnology. New biomaterials will sustain development and innovations in a variety of industries using cellulose and other plant polymers as, for example, scaffolds for tissue engineering and drug delivery, textiles and packaging products. Such advancements in plant research will provide opportunities to reduce costs and environmental damage (carbon footprint) associated with biomaterial production (e.g. by enabling use of agricultural waste).
- Policy influencers (e.g. public bodies within DEFRA) by gathering evidence on gene editing (relevant on the GMO agenda) and its impact on crop improvement and biomaterial design. The project will deliver new applications for 'rare' plant polymers which may be relevant in the context of government research priorities and funding to promote innovations in, for example, bioplastic research.
- The general public through greater understanding of plant structural biology and biomechanics and on the importance of plant cell walls for providing sustainable food and natural products. In the long term the global population will benefit from the research as it will support innovations on key food crops (e.g. wheat and tomato) addressing concerns on food security and the development of plant-biomaterials that are biodegradable and more environmentally sustainable.

Publications

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Amsbury S (2022) Immunofluorescence Detection of Callose in Plant Tissue Sections. in Methods in molecular biology (Clifton, N.J.)

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Bayer EM (2024) Plasmodesmata: Channels Under Pressure. in Annual review of plant biology

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Benitez-Alfonso Y (2022) Yoselin Benitez-Alfonso in Current Biology

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Benitez-Alfonso Y (2023) Enhancing climate change resilience in agricultural crops. in Current biology : CB

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Benitez-Alfonso Y (2023) Brassinosteroids en route in Nature Chemical Biology

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Benitez-Alfonso Y (2022) George Washington Carver: A plant scientist's perspective in Current Biology

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Benitez-Alfonso Y. (2022) Preface in Methods in Molecular Biology

 
Description Research has found cell wall composition and specifically callose regulated in tomato pit fields (complex plasmodesmata) and identified the differential regulation of two antibodies during ripening in fruits. Research also correlated the regulation of callose at plasmodesmata with the response to drought and temperature stress.
The mechanical properties of cell walls is under experimentation but no definitive results has been obtained yet.
Exploitation Route the out comes of this funding period could highlight routes for modifications of cell walls in fruits reducing or delaying fruit spoilage and improving shelf life and sugar content.
Translation of knowledge acquired in model plants could be used to enhance drought responses thus plant resilience to environmental stress.
Sectors Agriculture, Food and Drink

 
Description BBSRC panel B core member
Geographic Reach National 
Policy Influence Type Participation in a guidance/advisory committee
 
Description Thomas Greb at the University of Heidelberg 
Organisation Heidelberg University
Country Germany 
Sector Academic/University 
PI Contribution I visited the University for a week and learned about Brioullin microscopy.
Collaborator Contribution the group of Thomas Greb paid for my stay and also provided all consumables and access to instrumentation required for this experimental work. Furthermore they dedicated a Msc student to complete the work which now provided new data.
Impact n/a yet
Start Year 2021
 
Description Gatsby Summer school 2021 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Undergraduate students
Results and Impact About 60 UG students from all around the country are selected to take part in this summer schools which occur every year. I have serve as tutor for a group of students in these session. Tutorials take place for three consecutive days with a set of 8-10 students from different Universities. Togatheer we attend seminars from leaders in the field of Plant Sciences and then together we discuss the seminar and formulate questions for teh students to ask the speaker. this is a very nteractive sessions where the stduents get to know of my area of research and bond with each other. They gain confidence in using their rational critical thinking.
Year(s) Of Engagement Activity 2019,2020,2021,2022
URL https://www.gatsby.org.uk/plant-science/programmes/gatsby-plant-science-summer-school
 
Description Twitter account and website 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact I frequently tweets directions of rseearch and outcomes of our group area of research via twitter @benitez_lab and in our lab website. We currently have more than 2000 followers and this has also give a good influence by multiple audiences.
Recently i have also established a personal account where I engage in Equality and Inclusion issues thata re close to my heart, iming to improve academia but also bussinesses. this had made again huge impact
Year(s) Of Engagement Activity 2017,2018,2019,2020,2021,2022
URL https://benitezalfonso.wordpress.com
 
Description publication George W. Carver 
Form Of Engagement Activity A magazine, newsletter or online publication
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I was invited by Current Biology to write an article about the life of George Washington Carver. This was printed in January 2022 and led to positive reactions by academics and other members of the public. The article portrait the contributions of this black African American to research.
Year(s) Of Engagement Activity 2021
URL https://www.cell.com/current-biology/fulltext/S0960-9822(21)01644-4