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The diversity, biology and dynamics of microbial agents that regulate nematode populations in the rhizosphere

Lead Research Organisation: Rothamsted Research
Department Name: UNLISTED

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

Technical Summary

Nematode populations may be regulated in natural and disturbed ecosystems by microbial natural enemies. In some intensive production systems e.g. cereal monoculture, natural microbial enemies have increased to levels that control specific nematode pests. These 'suppressive' soils are slow to develop and difficult to exploit but provide a valuable resource for studying nematode interactions with the rhizosphere microbial community and for isolation of potential biological control agents. This project studies the population dynamics of cyst and root-knot nematode pests and their natural enemies, the bacterium Pasteuria penetrans and the fungus, Pochonia chlamydosporia.
The two major targets are:
a) to understand the interactions of P. chlamydosporia with its hosts, plants and other organisms in the rhizosphere at the molecular, whole organism and population level in order to develop rational biological control strategies based on this fungal agent
b) to study the genomics of P. penetrans in order to discover genes that may provide novel approaches to nematode management.
Key issues addressed, which relate to the success of P. chlamydosporia as a biological control agent are the role of intra-specific variation in the regulation of nematode host populations and the importance of nutrition in the transition of the fungus from a saprotroph in the rhizosphere to a parasite of nematode eggs. There is no simple relationship between the abundance of the fungus in soil and its efficacy as a biological control agent.
Research on the genomics of P. penetrans is underpinned by a collaboration between Rothamsted and North Carolina State University, which aims to sequence the genome of the bacterium and be the first microbial natural enemy of a nematode to have full sequence information. Such data is used to study the interactions between the bacterium and its hosts, especially genes that relate to the infective spore attachment process and bacterial metabolism.

Planned Impact

unavailable

Publications

10 25 50
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Boeri, Fausto; Chung, Jordan A. (2012) Nematodes: Morphology, Functions & Management Strategies

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Guzmán-Franco AW (2011) Use of quantitative PCR to understand within-host competition between two entomopathogenic fungi. in Journal of invertebrate pathology

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Hirsch P (2010) Culture-independent molecular techniques for soil microbial ecology in Soil Biology and Biochemistry

 
Description Fungi and bacteria that infect plant pathogenic nematodes vary in their host specificity - some can be exploited to reduce severity of nematode damage to crop plants
Exploitation Route publication of results in scientific literature provide information for further research; advice for farmers and growers and microbial cultures for controlling nematodes were made available
Sectors Agriculture

Food and Drink

Environment

 
Description To contribute to the interactive display "Journey to the Centre of the Earth - the first 23 cm"
First Year Of Impact 2010
Sector Agriculture, Food and Drink,Education,Environment
Impact Types Cultural

 
Description Display at the Cheltenham Science Festival 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Presented the interactive display "Journey to the Centre of the Earth" at the Cheltenham Science Festival over 3 days
Year(s) Of Engagement Activity 2011
URL http://www.rothamsted.ac.uk/journey-centre-earth-first-23cm
 
Description Interactive public display at the "Soil is Life" open days 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact We updated our "Journey to the centre of the earth - the first 23 cm" interactive display for school and public open days to mark the International Year of Soils, exhibited at Rothamsted Research, Harpenden at part of the "Soil is Life" open days. New exhibits added to display included oilseed rape plants and a poster to explain the "Roots of Decline" Project
Year(s) Of Engagement Activity 2015
 
Description Invited participant in AgMicrobiomes, NSF-funded workshop held in the Asilomar conference centre in California, USA 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact Invited to take part in AgMicrobiomes workshop in the USA, organised to discuss the best approaches for obtaining funding for microbiome research in the field of crop science
Year(s) Of Engagement Activity 2016
 
Description Public talk for the International Year of Soil "Microbial biodiversity in agricultural soils - does it matter?" 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Public lecture held in the evening at Rothamsted Research to mark the International Year of Soils, aimed at a general audience drawn from the locality, well attended, many questions from audience, based on my long research experience at Rothamsted but also highlighting new work
Year(s) Of Engagement Activity 2015
 
Description Stand at Royal Society Summer Exhibition 350th anniversary event at SouthBank Centre, London 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Interactive display introducing molecular soil ecology to the general public "Journey to the Centre of the Earth - the first 25 cm" presented at 4-day exhibition celebrating 350 years of the Royal Society
Year(s) Of Engagement Activity 2010
URL http://www.rothamsted.ac.uk/journey-centre-earth-first-23cm
 
Description member of the Advisory Committee on Releases into the Environment (ACRE) and chair of the soil ecology subgroup 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact All my research informed my expertise that I brought to ACRE where I served for 10 years until 2009
Year(s) Of Engagement Activity Pre-2006,2006,2007,2008,2009
 
Description member of the HSE Scientific advisory committee on Genetic modification (contained use) 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact I have been a member of the SACGM (CU) for many years to provide my expertise on the environmental risks of accidental release of GMOs form contained conditions. My expertise is based on all my BBSRC funding over the tears.
Year(s) Of Engagement Activity Pre-2006,2006,2007,2008,2009,2010,2011,2012,2013,2014,2015,2016,2017
 
Description talk to farmers and agronomists at the Laws Fertilisers Soils Seminar, Great Massingham, Norfolk 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Industry/Business
Results and Impact Gave a talk to farmers in Norfolk "Can we manage the soil and root microbiome?" and answered questions
Year(s) Of Engagement Activity 2016