H+ fluxes in phytoplankton - a mechanistic and modelling study of their physiological roles and impact upon community responses to ocean acidification
Lead Research Organisation:
Swansea University
Department Name: School of the Environment and Society
Abstract
The oceans remove about half of the carbon dioxide (CO2) that we release into the atmosphere and produce about half of the oxygen that we breathe. The photosynthetic marine phytoplankton play a major role in these processes, contributing to global carbon, nitrogen and sulphur cycling. Phytoplankton are not simply single-celled plants. They represent an extremely diverse collection of algae with many novel traits and complex evolutionary histories which are still poorly understood.
The increase in atmospheric carbon dioxide due to the burning of fossil fuels has major climatic implications. A result of the oceans absorbing much of this CO2 is the acidification of surface ocean waters - a drop from pH 8.2 to pH 7.7 is predicted by the end of the century. As ocean pH has remained stable for many millions of years this may have profound effects on many marine organisms that have not previously experienced this level of pH or rate of change during their recent evolutionary history. Ocean acidification will also change the levels of carbonate and nutrient ions, all of which may have significant impacts on the physiology of marine phytoplankton. While some of these impacts are being intensively studied, the direct effect of decreased pH itself on phytoplankton physiology has been largely overlooked.
Marine phytoplankton, like all organisms, must tightly regulate their cellular pH by in order to maintain favourable conditions for cellular processes. We have been studying mechanisms of pH regulation in coccolithophores, an important group of phytoplankton that play a major role in the global carbon cycle through their production of calcium carbonate scales (coccoliths) which sink to the deep ocean following cell death. We have discovered that coccolithophores use protein pores (channels) in their outer cell membrane to regulate pH inside the cell. These channels allow H+ to exit from the cell whenever acidity in the cell increases, thus acting to keep pH inside the cell constant. This is particularly important for coccolithophores as the production of coccoliths in the cell results in a constant production of H+ which need to be removed or the acidity inside of the cell would increase to dangerous levels. This novel mechanism is extremely sensitive to changes in external pH and may no longer function effectively at near future ocean pH levels. We have also found this form of H+ channel in diatoms, the most numerous and productive group of phytoplankton.
Remarkably, we have found that coccolithophore cells acclimated in the laboratory to growth at lower pH no longer appear to use a H+ channel. While this suggests coccolithophores may be able to cope with lower pH, we do not know the wider or long-term physiological implications of this mechanistic switch. This is clearly something we urgently need to understand.
This project will examine in detail the mechanisms of pH homeostasis in coccolithophores and diatoms. Our modelling studies predict that mechanisms of cellular pH regulation are likely to differ in large and small phytoplankton species as these will experience greatly different fluctuations in pH at the cell surface due to physical effects of cell size on diffusion at the cell surface. We propose that different mechanisms of pH homeostasis employed by phytoplankton species may play a major role in the response of these organisms to ocean acidification.
In order to gauge how these novel aspects of phytoplankton physiology will impact upon marine ecosystems on a broader scale, we will use modelling approaches to examine how cellular H+ fluxes in phytoplankton cells respond to changes in their environment. These mathematical models will enable us to predict the ranges of pH experienced by different phytoplankton species both currently and in the future and will allow us to evaluate their impact on the diversity of natural phytoplankton populations that will be studied in related programmes.
The increase in atmospheric carbon dioxide due to the burning of fossil fuels has major climatic implications. A result of the oceans absorbing much of this CO2 is the acidification of surface ocean waters - a drop from pH 8.2 to pH 7.7 is predicted by the end of the century. As ocean pH has remained stable for many millions of years this may have profound effects on many marine organisms that have not previously experienced this level of pH or rate of change during their recent evolutionary history. Ocean acidification will also change the levels of carbonate and nutrient ions, all of which may have significant impacts on the physiology of marine phytoplankton. While some of these impacts are being intensively studied, the direct effect of decreased pH itself on phytoplankton physiology has been largely overlooked.
Marine phytoplankton, like all organisms, must tightly regulate their cellular pH by in order to maintain favourable conditions for cellular processes. We have been studying mechanisms of pH regulation in coccolithophores, an important group of phytoplankton that play a major role in the global carbon cycle through their production of calcium carbonate scales (coccoliths) which sink to the deep ocean following cell death. We have discovered that coccolithophores use protein pores (channels) in their outer cell membrane to regulate pH inside the cell. These channels allow H+ to exit from the cell whenever acidity in the cell increases, thus acting to keep pH inside the cell constant. This is particularly important for coccolithophores as the production of coccoliths in the cell results in a constant production of H+ which need to be removed or the acidity inside of the cell would increase to dangerous levels. This novel mechanism is extremely sensitive to changes in external pH and may no longer function effectively at near future ocean pH levels. We have also found this form of H+ channel in diatoms, the most numerous and productive group of phytoplankton.
Remarkably, we have found that coccolithophore cells acclimated in the laboratory to growth at lower pH no longer appear to use a H+ channel. While this suggests coccolithophores may be able to cope with lower pH, we do not know the wider or long-term physiological implications of this mechanistic switch. This is clearly something we urgently need to understand.
This project will examine in detail the mechanisms of pH homeostasis in coccolithophores and diatoms. Our modelling studies predict that mechanisms of cellular pH regulation are likely to differ in large and small phytoplankton species as these will experience greatly different fluctuations in pH at the cell surface due to physical effects of cell size on diffusion at the cell surface. We propose that different mechanisms of pH homeostasis employed by phytoplankton species may play a major role in the response of these organisms to ocean acidification.
In order to gauge how these novel aspects of phytoplankton physiology will impact upon marine ecosystems on a broader scale, we will use modelling approaches to examine how cellular H+ fluxes in phytoplankton cells respond to changes in their environment. These mathematical models will enable us to predict the ranges of pH experienced by different phytoplankton species both currently and in the future and will allow us to evaluate their impact on the diversity of natural phytoplankton populations that will be studied in related programmes.
Planned Impact
This proposal aims to deliver substantial and lasting impact by providing mechanistic understanding of an essential process in marine phytoplankton. As this physiological process will be impacted by ocean acidification, the research will be of relevance to a wide variety of stakeholders with climate change interests. In addition to diverse scientific communities, the research will therefore have a wider impact in relation to understanding of processes and activities that are underpinned by marine productivity and the stability of marine ecosystems, from food production and tourism through to environmental management.
The proposed research is cutting edge blue-skies research aimed at gaining a better understanding of fundamental biogeochemical processes. The impact of the research on many of these diverse stakeholders may be indirect. Although we will engage directly with a variety of stakeholders (in academic, commercial and policy areas), a key goal of the proposed research is to build pathways to enable scientific breakthroughs at the organism level to feed through and inform stakeholders of the impacts at the ecosystem and ultimately global level. We aim to accomplish this by building cellular and ecosystem models to broaden the impact of our research and translate progress at the cellular level into meaningful impacts at the ecosystem level. Our aim is to enhance and facilitate the integration of scientific communities engaged in experimental and modelling approaches to promote the dissemination of blue skies research. This approach and its implementation are discussed in more detail in the Pathways to Impact attachment.
The economic and societal impacts of the research are broad as the results may affect many aspects of society that rely on marine ecosystems.
Non-academic stakeholders include policy forming bodies such as Governmental Environment and Climate Change Departments (e.g. the European Union, the UK Met Office, UK Government Departments, including DECC and DEFRA) as well as international bodies and NGOs (IPCC, environmental and fisheries charities, pressure groups). All of these groups have a potential interest in marine primary productivity and the impact ocean acidification may have on this process. Improved quantitative understanding of likely consequences of environmental change on novel physiological processes in marine phytoplankton will allow these policy forming bodies to address issues such as CO2 emission and mitigation strategies and policies. The research will also provide information that may be used in ecosystem management protection, and prediction and mitigation against any undesirable changes.
The proposed research is cutting edge blue-skies research aimed at gaining a better understanding of fundamental biogeochemical processes. The impact of the research on many of these diverse stakeholders may be indirect. Although we will engage directly with a variety of stakeholders (in academic, commercial and policy areas), a key goal of the proposed research is to build pathways to enable scientific breakthroughs at the organism level to feed through and inform stakeholders of the impacts at the ecosystem and ultimately global level. We aim to accomplish this by building cellular and ecosystem models to broaden the impact of our research and translate progress at the cellular level into meaningful impacts at the ecosystem level. Our aim is to enhance and facilitate the integration of scientific communities engaged in experimental and modelling approaches to promote the dissemination of blue skies research. This approach and its implementation are discussed in more detail in the Pathways to Impact attachment.
The economic and societal impacts of the research are broad as the results may affect many aspects of society that rely on marine ecosystems.
Non-academic stakeholders include policy forming bodies such as Governmental Environment and Climate Change Departments (e.g. the European Union, the UK Met Office, UK Government Departments, including DECC and DEFRA) as well as international bodies and NGOs (IPCC, environmental and fisheries charities, pressure groups). All of these groups have a potential interest in marine primary productivity and the impact ocean acidification may have on this process. Improved quantitative understanding of likely consequences of environmental change on novel physiological processes in marine phytoplankton will allow these policy forming bodies to address issues such as CO2 emission and mitigation strategies and policies. The research will also provide information that may be used in ecosystem management protection, and prediction and mitigation against any undesirable changes.
Organisations
People |
ORCID iD |
Kevin Flynn (Principal Investigator) |
Publications
Chrachri A
(2018)
Dynamic changes in carbonate chemistry in the microenvironment around single marine phytoplankton cells.
in Nature communications
Fernie A
(2015)
A cross-kingdom history
in eLife
Flynn K
(2012)
Changes in pH at the exterior surface of plankton with ocean acidification
in Nature Climate Change
Flynn K
(2017)
What is the limit for photoautotrophic plankton growth rates?
in Journal of Plankton Research
Flynn KJ
(2016)
The role of coccolithophore calcification in bioengineering their environment.
in Proceedings. Biological sciences
Flynn KJ
(2015)
Ocean acidification with (de)eutrophication will alter future phytoplankton growth and succession.
in Proceedings. Biological sciences
Description | A model has been developed that explains the linkage between pH (ocean acidification and basification; i.e., via H+) and growth/death of phytoplankton. Further, this relationship differs between species and hence under ocean acidification the interactions between phytoplankton will change. This will impact upon fisheries. The model has been further developed and now presents an explanation for why coccolithophorids produce chalk; hitherto this global-scale event has had no rational explanation - it appears that these organisms do so to mitigate against pH change. See http://theconversation.com/microscopic-marine-plants-bioengineer-their-environment-to-enhance-their-own-growth-63355 |
Exploitation Route | The model produced, when integrated within ecosystem models, has the potential to better inform climate change understanding. |
Sectors | Agriculture, Food and Drink,Environment |
URL | http://theconversation.com/microscopic-marine-plants-bioengineer-their-environment-to-enhance-their-own-growth-63355 |
Description | MixITiN H2020 MSCA ITN |
Amount | € 2,860,000 (EUR) |
Funding ID | 766327 |
Organisation | European Union |
Sector | Public |
Country | European Union (EU) |
Start | 10/2017 |
End | 09/2021 |
Title | Model of Algal Production and growth with temperature, nutrients and light + pH |
Description | Variable stoichiometric multi nutrient phytoplankton model with pH (OA) linkage |
Type Of Material | Computer model/algorithm |
Year Produced | 2012 |
Provided To Others? | Yes |
Impact | paper in Nature Climate Change successful subsequent grant application |
Title | Phytoplankton OA |
Description | Plankton-functional type model bidirectionally linked to ocean acidification, so pH rises during net C-fixation and declines otherwise, and with calcification |
Type Of Material | Computer model/algorithm |
Year Produced | 2016 |
Provided To Others? | Yes |
Impact | too early to say beyond the current deployment for papers (Flynn et al. 2016, 2014, 2012) |
Description | The Conversation - Microscopic marine plants bioengineer their environment to enhance their own growth |
Form Of Engagement Activity | A magazine, newsletter or online publication |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Media (as a channel to the public) |
Results and Impact | Article in The Conversation - http://theconversation.com/microscopic-marine-plants-bioengineer-their-environment-to-enhance-their-own-growth-63355 |
Year(s) Of Engagement Activity | 2016 |
URL | http://theconversation.com/microscopic-marine-plants-bioengineer-their-environment-to-enhance-their-... |