Guidance cues and pattern prediction in the developing retinal vasculature: a combined experimental and theoretical modelling approach

Lead Research Organisation: University of Ulster
Department Name: Sch of Biomedical Sciences

Abstract

Summary The aim of this project is to use the latest mathematical modelling (MM) techniques coupled with state-of-the-art 3-D imaging to discover how the final patterning of the mouse retinal vasculature plexus (RVP) is regulated in both normally developing mice and mice with severe vascular defects (VEGF-transgenics); similar to those observed to cause a lifetime of blindness in human babies . As the retina grows, its metabolic needs are supported by a 3-D network of blood vessels that form a characteristic pattern of capillary networks linking the arterioles and veins in its different layers. The final structure of the RVP is determined by molecular pathways in the tissue, on which the endothelial cells (the main cell forming the blood vessels) and pericytes (cells which give structural/functional stability to the vessels) migrate. The direction of migration of these cells is dependent on the concentration gradients of both soluble and matrix-associated factors which chemically (chemotaxis) attract the cells towards the rim of the optic cup. Using confocal and 2-photon microscopy (allowing the collection and assimilation of 3-D images of cells, pathways and chemotactic agents) we will examine the retina from different developmental stages of normal and neonatal mice with vascular malformations to discover which molecular pathways and chemotactic agents are critical in determining the patterning and final maturation of the RVP. The images are generated by labelling cells with specific dyes (for instance endothelium with an isolectin called BSI-B4; perictes, with a probe against smooth muscle actin and pathways/chemotactic agents with specific antibodies) exciting the tissue with a laser and capturing the light from the fluorescing dyes with a confocal microscope. As all the images collected in these studies are essentially snapshots of what happens at one particular time during the growth of the RVP, it is essential to be able to overlay these results and discover how the cells respond to the underlying expression patterns of the pathways and chemotactic agents being produced over time (temporally). This is where the powerful tool of MM can lead to new discoveries about how the combination of events (at the tissue, cell and molecular level) are regulated. The first proposed MM will initially rely on data generated from studies performed in normal and VEGF-transgenic neonatal mice. After collecting, digitising and quantitating a series of parameters (i.e. vessel lengths, branch-points, fractal dimension [how often a basic pattern is repeated at different scales], cell-type, location and concentration of molecules) this information is used to inform the MM, so that a virtual model of the RVP can be generated. This MM is then verified and improved, by testing its ability to predict the RVP patterning at later stages during development. Gaps in the biological data (in both the pathways and the chemotactic gradients) can be anticipated by the MM that will then be used to inform biological experiments by proposing new studies which will further elucidate the cellular and molecular mechanisms underlying the development of the 3-D structure of the RVP. This is a unique collaboration between biologists and mathematicians, in which both disciplines are instructive in discovering how a complex 3-D tissue, the RVP, grows and contributes to the final structure of the eye in both normal animals and animals with a serious ocular pathology. The final portion of the project will employ the MM to predict which therapeutic approaches to treat the VEGF-transgenic mice, will prevent progression of ocular pathology. This research will benefit basic biological understanding of how blood vessels grow in 3-D (which determines the growth of all organs), how the eye grows normally and more specifically in ocular conditions characterised by inapprpriate blood vessel formation (all major diseases that cause blindness in neonates and adults).

Technical Summary

The retinal vascular plexus (RVP) is a complex 3-D structure which supports the metabolic demands of a rapidly developing and differentiating retina during neonatal life in mammals. The architecture is tightly regulated by coupling of angiogenic sprout growth along an underlying structural matrix, in response to chemotactic cues which are spatio-temporally resticted during the matruation of the RVP. Since the direct visualization of tissue, cellular, matrix and chemotactic cues in a temporal fashion is currently unattainable, we will combine the latest confocal/2-photon microscopic imaging techniques in 3-D (along with parameterization of these images) with mathematical modelling (MM) in order to generate a temporally-resolved 3-D architecture of the RVP, which recapitulates experimental observations. This should result in a realistic, temporally-defined 3-D vascular growth pattern, which grows along the pathways and responds to chemotactic gradients as defined from the in vivo studies. Initially the MM will entirely rely on data generated from in vivo studies, with verification and improvement of the model being performed. Later iterations of the MM, will be used to inform biological studies (such as focussing on specific chemotactic cues, time-points or indicators of cellular behaviour), thus integrating the biological and MM approaches. This is a unique collaboration between biologists and mathematicians, in which both disciplines are instructive in discovering how a complex 3-D tissue, the RVP, grows and contributes to the final structure of the eye in both normal animals and animals with a serious ocular pathology. Finally, the MM will be used to predict how agents can modify RVP growth in both normal and VEGF-transgenic mice, with one aim being to prevent progression of ocular pathology. This research will benefit basic biological understanding of how blood vessels grow in 3-D (which determines the growth of all organs) and more specifically in the eye.

Publications

10 25 50
 
Description Our research showed that mathematical models based on real world data can be used to refine and iteratively improve their predictive nature. The publications arising from these studies has been widely cited by researchers in the fields of amthematical biology and developmental biology.
Exploitation Route The approaches we demonstrated have been used to model other systems and have potential to inform models for the pharmaceutical industry, to replace animal models.
Sectors Pharmaceuticals and Medical Biotechnology

 
Description Articles have been published in peer reviewed Journals that show that realistic and informative mathematical models can robustly tested by careful selection of in vivo data. These studies have informed mathematical modelling studies in a number of related areas of research as well as in other disciplines as evident from citations which quote our work.
First Year Of Impact 2011
Sector Pharmaceuticals and Medical Biotechnology
Impact Types Societal

 
Description FP7
Amount £270,000 (GBP)
Organisation European Commission 
Department Seventh Framework Programme (FP7)
Sector Public
Country European Union (EU)
Start 10/2012 
End 10/2015
 
Description Modelling of vascular development and regeneration 
Organisation Heriot-Watt University
Country United Kingdom 
Sector Academic/University 
PI Contribution Joint BBSRC grant on mathematical modelling of vasculature, primarily in the developing eye. Our group conducted all the in vivo experiments underpinning the modelling simulations conducted by our colleagues in Dundee and Edinburgh.
Collaborator Contribution MAthematical modelling of the dynamic process of blood vessel development in the fetal eye. Also mathematical modelling of longitudinal wound healing healing in the skin. Resulted in 3 peer reviewed manuscripts being published.
Impact Three peer reviewed publications. Multi-disciplinary - Biomedical science and mathematics.
Start Year 2006
 
Description Modelling of vascular development and regeneration 
Organisation University of Dundee
Country United Kingdom 
Sector Academic/University 
PI Contribution Joint BBSRC grant on mathematical modelling of vasculature, primarily in the developing eye. Our group conducted all the in vivo experiments underpinning the modelling simulations conducted by our colleagues in Dundee and Edinburgh.
Collaborator Contribution MAthematical modelling of the dynamic process of blood vessel development in the fetal eye. Also mathematical modelling of longitudinal wound healing healing in the skin. Resulted in 3 peer reviewed manuscripts being published.
Impact Three peer reviewed publications. Multi-disciplinary - Biomedical science and mathematics.
Start Year 2006