Structural studies on the talin head domain - a key regulator of cell-matrix interactions

Lead Research Organisation: University of Liverpool
Department Name: Sch of Biological Sciences

Abstract

In all multi-cellular organisms cells are attached to a special tissue, extracellular matrix. This establishes the integrity of the organism and shapes other tissues, making cell-matrix interaction essential for the embryonic development and tissue maintenance. The cells are attached to the matrix through integrin receptors that are embedded in the outer cell membrane. A large multi-protein adhesion complexes are formed at the intra-cellular domains of the receptors connecting receptors to the cytoskeleton that maintains the shape and rigidity of cells. In moving a cell the contacts with the matrix are established through a series of connected events. At the leading edge the cell engages layilin receptors to establish initial contacts. Inside the cell an adaptor protein talin is recruited to the site of the adhesion. Talin, in turn, binds and activates PIP kinase that generates signalling molecule PIP2 at the site of the adhesion. In addition, talin activates integrin receptors that are required for a strong contact. Talin also makes a connection the between the receptors and actin cytoskeleton that allows the cell to apply force required for the motion. The main challenge when studying such a complex system is to derive a comprehensive information that takes all components into account. In order to achieve this we have chosen a key protein of the adhesion complex - talin and devised a set of experiments using various biophysical methods to analyse the network of interactions that talin forms at different stages of adhesion. We aim at extracting the main factors that direct and regulate talin interaction to analyse them in depth and then to integrate this knowledge within a single model that can be tested experimentally. We concentrate on the head domain of this large 2541-residue protein as it is crucial for the interaction with integrin and layilin receptors and contains binding sites for PIP kinase and PIP2. This 400-residue fragment consists of four well-defined subdomains and our preliminary data indicate that the relative orientation of the subdomains may depend on the protein environment, providing a mechanism for the activity regulation. Initially we will determine the structure of the full talin head and analyse the factors that affect it. We will then introduce talin ligands and determine the contribution from different parts of the talin head into the interactions. We expect that some of the subdomains will be involved in direct contact, while others will contribute indirectly by affecting the binding domains. We will also study the effect of binding of one ligand on the talin interaction with a different ligand. This information is essential for the understanding of how one talin ligand displaces another during the adhesion complex assembly. Despite of the importance for the adhesion regulation, talin interaction with PIP2 remains elusive due to the low stability of the complex. We found conditions for the PIP2 complex analysis in our pilot studies and will determine the effect of PIP2 binding on talin structure in order to understand the mechanism of talin activation by PIP2. As the adhesion complexes are assembled on a membrane, the understanding of the system is incomplete until the effect of the membrane is determined. We will derive conditions that will allow us to obtain structural information in a membrane-like environment and will use them to reconstitute the talin adhesion complexes. This will bring all the main components together and will provide an experimental model for the integrated analysis of the talin function. We will use the model to design talin mutations that selectively enhance specific interactions so they can be correlated with the biological properties in cell experiments.

Technical Summary

High-resolution structure of the talin head domain (residues 1-400) will be determined by a combination of NMR and SAXS and the effect of solvent conditions such as pH and salt concentrations on the structure will be analysed. The contributions from individual subdomains of the talin head into the interactions with layilin and integrin PIP kinase will be characterised by NMR mapping of the interaction sites and comparison of the affinities of different talin fragments for the ligands measured by stopped-flow fluorescence, ITC and NMR. Talin binding sites for the complete layilin cytodomain will be defined by the NMR mapping and the structure of the full talin-layilin complex will be determined. The correlation between the binding of different talin head ligands will be established. PIP2 binding sites on the talin head subdomains will be identified and the structures of the PIP2 complexes with the individual subdomains and complete talin head with be determined. The effect of the PIP2 binding on the conformation of the talin head and its interaction with ligands will be established. Conditions for the talin complex assembly in a membrane-like environment will be optimised and an experimental model that reconstructs multi-component talin complexes will be assembled. The results of the project will be integrated to design talin mutations that selectively affect interaction with ligands either through direct interaction or indirectly, through modulation of subdomain arrangement.
 
Description Talin is a key adhesion molecule that is essential for the activation of integrin receptors. We discovered that the structure of the talin head is unique in the family of the related FERM domain proteins. Four domains of the talin head make a linear extended arrangement, in contrast to a previously observed compact structure in other proteins. This linear arrangement is optimal for the binding to the cell membrane and for integrin activation. The linear arrangement is stabilised by the linker between the two central domains in the talin head and we proposed a set of mutations that can modulate the inter-domain arrangement and thus affect integrin activation.

We identified strcutural features of the talin head that independently contribute into the integrin activation. (i) All the domains include positively charged residues that are aligned on on side of the linear structure and make the membrane interaction dependent on the negative surface charge. (ii) The second domain of the head includes a large insert loop that dynamically adopts a helical structure in the presence of negatively charged membrane. Combining our finding into a model of integrin activation we propose a "fly-casting" mechanism where the insert loop initiates the membrane contact and subsequently pulls the rest of the talin head close to the membrane surface. On the membrane the positively charged surface of the molecule is engaged, aligning the talin head in the optimal position for the integrin activation. Our work provides molecular details for the integrin activation by talin and identifies the critical components of the process that can be manipulated to modulate cell adhesion and migration.
Exploitation Route The results are immediately relevant to the fundamental understanding of the cell-matrix adhesion. In the future, the interactions of the talin head could be exploited to control cell adhesion and cell migration.
Sectors Education,Healthcare,Pharmaceuticals and Medical Biotechnology

 
Description Results were used in the undergraduate and postgradual teaching. NMR analysis approaches developed in the study were applied in translational projects.
First Year Of Impact 2010
Sector Education,Manufacturing, including Industrial Biotechology,Pharmaceuticals and Medical Biotechnology
 
Title Expression vectors for talin head fragments 
Description DNA plasmids for expressing recombinant talin fragments in e.coli for in vitro analysis. Detains published in "The structure of the talin head reveals a novel extended conformation of the FERM domain. Paul R. Elliott, Benjamin T. Goult, Petra M. Kopp, Neil Bate, J. G?nter Grossmann , Gordon C. Roberts, David R. Critchley and Igor L. Barsukov (2010) Structure, 18, 1289-1299" "Structure of a double ubiquitin-like domain in the talin head: a role in integrin activation." Benjamin T. Goult, Mohamed Bouaouina, Paul R. Elliott, Neil Bate, Bipin Patel, Alexandre R. Gingras, J. G?nter Grossmann, Gordon C.K. Roberts, David A. Calderwood, David R. Critchley and Igor L. Barsukov (2010) EMBO J, 29, 1069-1080 
Type Of Material Model of mechanisms or symptoms - in vitro 
Year Produced 2010 
Provided To Others? Yes  
Impact facilitated experiments 
 
Title Crystal structure of the talin head FERM domain, 3IVF 
Description PDB database deposition of the atomic coordinates of the strcuture of the whole talin head 
Type Of Material Database/Collection of data 
Year Produced 2009 
Provided To Others? No  
Impact No actual impacts realised to date 
URL http://www.rcsb.org
 
Title NMR structure of the F0 domain (residues 0-85) of the talin ferm domain 
Description PDB database deposition of the atomic coordinates of the structure of the talin head F0 domain 
Type Of Material Database/Collection of data 
Year Produced 2008 
Provided To Others? No  
Impact No actual impacts realised to date 
URL http://www.rcsb.org
 
Title NMR structure of the F0F1 double domain (residues 1-202) of the talin ferm domain 
Description PDB database deposition of the atomic coordinates of the structure of the talin head F0F1 region 
Type Of Material Database/Collection of data 
Year Produced 2009 
Provided To Others? No  
Impact No actual impacts realised to date 
URL http://www.rcsb.org
 
Title Solution structure of the talin F3 in complex with layilin cytodomain 
Description PDB database deposition of the atomic coordinates of the structure of the talin head F3 domain complex 
Type Of Material Database/Collection of data 
Year Produced 2008 
Provided To Others? No  
Impact No actual impacts realised to date 
URL http://www.rcsb.org
 
Description NMR analysis of kindlin 
Organisation Yale University
Country United States 
Sector Academic/University 
PI Contribution The collaboration is a follow up from talin studies. Critical for the understanding of the role of kindlin in adhesion.
Start Year 2010
 
Description Role of talin in force transduction 
Organisation Yale University
Department School of Medicine
Country United States 
Sector Academic/University 
PI Contribution Use of a combination of structural biology and fluorescence microscopy to define the effect of force on the talin interactions in adhesion.
Start Year 2010
 
Description Structural and functional studies of Shank3 
Organisation University Medical Center Hamburg-Eppendorf
Department Institute for Human Genetics
Country Germany 
Sector Hospitals 
PI Contribution Identified new functional domain in autism-related proteins Shank3 and solved its structure using information and approached of the funded project.
Collaborator Contribution Partners demonstrated the role of Shank3 in the integrin regulation through collaborative research.
Impact Structure of Shank3 SPN domain, PDB ID 5G4X. Publication DOI 10.1038/ncb3487
Start Year 2013
 
Description Structural and functional studies of Shank3 
Organisation University of Turku
Department Turku Centre for Biotechnology
Country Finland 
Sector Academic/University 
PI Contribution Identified new functional domain in autism-related proteins Shank3 and solved its structure using information and approached of the funded project.
Collaborator Contribution Partners demonstrated the role of Shank3 in the integrin regulation through collaborative research.
Impact Structure of Shank3 SPN domain, PDB ID 5G4X. Publication DOI 10.1038/ncb3487
Start Year 2013
 
Description Structural and functional studies of talin 
Organisation University of Manchester
Country United Kingdom 
Sector Academic/University 
PI Contribution The collaboration links in vitro analysis of talin with cell studies. Critical for the understanding of the role of talin in adhesion. Generated further publications and grant applications in the adhesion area. Stimulates multi-disciplinary research.
Collaborator Contribution Partners conducted experiments in cells to test predictions from structural analysis in vitro.
Impact Multi-disciplinary collaboration, partners conduct research in cell biology field. Publications, DOI: 10.1038/ncomms10038, 10.1016/j.str.2016.04.016, 10.1074/jbc.M112.438119
Start Year 2011
 
Description Talin link to the integrin regulation 
Organisation University of Turku
Country Finland 
Sector Academic/University 
PI Contribution Structural analysis on the novel regulator of integrin activity.
Start Year 2010
 
Description Gordon Research Conference 2011 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Participants in your research and patient groups
Results and Impact Presentation at the research conference

no actual impacts realised to date
Year(s) Of Engagement Activity 2011