SALAMANDER: SALivAry bioMarkers of mediterraneAN Diet associated with long-tERm protection against type 2 diabetes mellitus

Lead Research Organisation: King's College London
Department Name: Dental Institute

Abstract

Type 2 diabetes mellitus (T2DM) is a major public health concern, affecting more than 400 million adults worldwide, a figure that may rise to 642 million by 2040. Effective strategies to prevent or delay the onset of the disease include modifiable factors such as lifestyle, physical activity and nutrition. The Mediterranean Diet (MeDi) combines different food groups that are beneficial for nutrition-related diseases. A MeDi diet is characterized by high consumption of vegetables, legumes, fruits, cereals and olive oil, moderate-to-high intake of fish, low intake of dairy products and meat, and low-to-moderate intake of wine. Beyond dietary habits, the MeDi is also part of a lifestyle with traditional practices, skills and traditions. The MeDi has been consistently associated with a lower risk of T2DM over time in several studies. In this project, we aim at identifying salivary biomarkers of a healthy dietary pattern (MeDi) associated with prevention of T2M. In SALAMANDER, the main idea is that among healthy subjects, some salivary patterns may convey two types of information: adherence to MeDi and a future positive affect on health (protection against T2DM in the following 7 to 11 years).

The study will look at 3 groups of subjects across Europe: initially the UK Biobank, N= 85 000 and then two cohorts specifically of older adults: the ENRICA study in Spain and the 3-City study in Bordeaux France. Blood samples, questionnaires data (lifestyle including physical activity, diet, dietary supplements, clinical data and drug use...) and physical measurements (anthropometrics, blood pressure...) are available in the three cohorts. In addition, saliva samples have been taken at baseline on the UK Biobank. A detailed description of the cohorts is provided in part 3 of this application.

Technical Summary

Saliva offers the advantages of simple and non-invasive sampling and a rich source of biomarkers thanks to the high diversity of its microbiome, proteome and metabolome. Recent results suggest that saliva composition in humans is dependent on diet quality and diversity. The main objective of the proposed project is to identify and validate salivary signatures indicative of healthy
dietary choices (adoption of a Mediterranean diet) with a positive long-term health outcome (protection against type 2 diabetes) throughout adult life.
Saliva samples and data on diet, lifestyle and health questionnaires will be obtained from UK Biobank, the largest salivary bank in Europe (85000 saliva donors) collected between 2006 and 2010. This will enable researchers to relate past salivary and dietary patterns to current health status. It is expected that approximately 3000 subjects from whom saliva was sampled will now have diabetes. For biomarker discovery, subjects will be categorized as follows: healthy at baseline, and either still healthy (H+) or currently diagnosed with type 2 diabetes (H-). Compliance to the Mediterranean diet (D+, D-) will also be evaluated with appropriate adjustment factors (physical activity, dietary supplements...). Within each of the four D/H groups, 50 subjects will be randomly selected and their salivary microbiome, proteome and metabolome will be analysed and data integrated to define a multimarker signature of healthy diet associated with protection against type 2 diabetes. The biomarker signature will be validated by examining two additional population-based cohorts of elderly subjects in Spain (ENRICA) and France (3City-Bordeaux), enabling verification of whether the identified biomarkers signatures are conserved as ageing proceeds. The project will advance nutritional epidemiology by proposing objective and non-invasive biomarkers of compliance to a beneficial diet associated with prevention of a diet-related disease.

Planned Impact

Impact summary
 
Description The Medi (Mediterranean) Diet is substantially plant-based and widely percieved to be a healthier diet.
1. We obtained nutritional data of subjects who took part in the UK Biobank study and gave a numerical score to indicate degree of adherence to a Medi Diet. We found that increased adherence to the Medi Diet was associated with a lower risk of type 2 diabetes (T2DM) and this was due to a lower risk of being overweight and to a direct effect of the Medi Diet on development of T2DM, suggesting that the Medi Diet is also beneficial for those who are not overweight. This might be due to a higher consumption of important nutrients such as vitamins and antioxidants and a lesser consumption of saturated fats and refined sugars. These results have been published.
2. We collected saliva samples from 2 cohorts of elderly subjects (3C-Bordeaux, France and Seniors-ENRICA-2, Madrid) and analysed the proteins present. We found that specific proteins in saliva were helpful as markers of dietary intake of vegetables, butter and sweet snacks. These results have been submitted for publication.
3. Saliva samples from the Seniors-ENRICA-2 cohort of subjects were analysed to determine the composition of microrganisms (microbiome). We found that, in subjects with T2DM, the diversity of bacterial species was reduced and clusters of certain bacterial species were more abundant. We also found that clusters of certain bacterial species were associated with increased consumption of sugary snacks along with decreased consumption of fish/ shellfish and nuts. A manuscript describing these results is in preparation.
Exploitation Route These results are relevant for public health, in particular for encouraging a Mediterranean-like dietary pattern for primary prevention of type 2 diabetes mellitus and overweight/obesity.
Sectors Agriculture, Food and Drink,Healthcare

URL http://www.inra.fr/salamander
 
Title 16S amplicon sequencing data for saliva samples of diabetic patients 
Description 16S amplicon sequencing data for saliva samples of elderly type-2 diabetic and non-diabetic patients stratified according to adherence to a mediterranean style diet 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact It can be concluded that the microbial community structure of saliva is altered in T2DM and obesity and is associated with altered consumption of particular food items. In order to further substantiate these observations a prospective study should be undertaken to assess the impact of diets aimed at modifying diabetic status and reducing weight. 
URL https://www.ebi.ac.uk/ena/browser/view/PRJEB51205
 
Title 3Cités cohort saliva sample collection 
Description A collection of saliva samples from a subgroup of patients in the 3Cités cohort of individuals aged 65 and over in Bordeaux, Dijon and Montpellier 
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? No  
Impact This saliva sample collection with associated data on the cohort is part of the revised SALAMANDER study 
URL https://www6.inrae.fr/salamander/Consortium/UBx
 
Title ENRICA-Seniors cohort saliva sample collection 
Description Saliva samples have been collected from subjects who are part of the ENRICA-Seniors cohort created by the Universidad Autónoma de Madrid. 
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? No  
Impact The creation of this saliva sample has enabled the objectives of the SALAMANDER study to be investigated. 
URL https://www6.inrae.fr/salamander/Consortium
 
Description SALAMANDER project: SALivAry bioMarkers of mediterraneAN Diet associated with long-tERm protection against type 2 diabetes 
Organisation Autonomous University of Madrid
Country Spain 
Sector Academic/University 
PI Contribution Analysis of the microbiome of saliva samples.
Collaborator Contribution Selection and collection of salivas from the ENRICA cohort
Impact Publication of paper
Start Year 2017
 
Description SALAMANDER project: SALivAry bioMarkers of mediterraneAN Diet associated with long-tERm protection against type 2 diabetes 
Organisation University of Bordeaux
Country France 
Sector Academic/University 
PI Contribution Analysis of salivary microbiome
Collaborator Contribution Collection of saliva samples from 3-C Bordeaux cohort
Impact Publication of paper.
Start Year 2017
 
Description School of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, Republic of Korea 
Organisation Gwangju Institute of Science and Technology
Country Korea, Republic of 
Sector Academic/University 
PI Contribution 16Srnagene sequencing of microbiome in saliva samples
Collaborator Contribution Bioinformatics analysis of sequences
Impact Manuscript in preparation, to be submitted in March/ April, 2022. Sequencing data to be uploaded to European Nucleotide Archive in March 2022.
Start Year 2021