Support for synapses: the role of cell adhesion molecules in glial morphogenesis

Lead Research Organisation: UNIVERSITY COLLEGE LONDON
Department Name: Institute of Ophthalmology

Abstract

The central nervous system (CNS) consists of the brain, spinal cord and retina (eye). It controls most functions of the body and mind. Despite the importance of these tissues are made up of only two major cell types: neurons and glia. Most researchers focus on neurons because they are the electrical wires passing signals to perform daily functions. However, glial cells outnumber neurons in the CNS and they support neurons to make sure they are healthy and function properly. To make up the CNS, neurons and glia need to meet during development and make specific partnerships that last a lifetime. Glial cells have special shapes so that they can connect to the neurons. Changes in glial shape can make neurons sick and potentially lead to disease. So it is important to understand how glial cells get their shape in the first place so we can make sure they keep it and support the neurons throughout the lifespan. We don't know how glial cells get their shape and meet their neuronal partners. We also don't know exactly what happens to neurons if glial cells don't make these connections in the first place. I want to explore these really important fundamental questions.

In order to really understand how glia get their shapes and support neurons the best way is to watch it happen in a living animal during their development. I am an expert in studying glial cells in the retina of the zebrafish using genetics and microscopy techniques. The retina is a really simple CNS tissue, if compared to the brain. I will use the zebrafish to study this very interesting problem as we can see inside it during early development, its retina has neurons and glia just like humans, and we can follow individual cells using fluorescent proteins. Thus, using microscopy I can watch how neurons and glia behave to meet and make their connections in a living fish. I have found that glia are active and change their shapes very quickly to find and contact specific neurons. We don't know what molecules are controlling the glia to find their neuronal partners. To identify molecules I carried out a genetic screen looking for glial cells with shape defects. This identified the cell adhesion molecules, which are important molecules for cell connections in many different tissues, including the retina and brain. However, we don't know how these particular ones work in the glia to control their shapes during development. To find out why these genes are important and how they help the glia find their partners I will delete them in zebrafish and observe how retina development goes wrong in animals without these genes. To achieve this I will use microscopy to watch glia and neurons in retinas that grow abnormally. Finally, I have shown before that if you don't have any glia in the zebrafish retina then it doesn't function properly. So I will test the vision of fish that still have glia but only their shapes, and connections to neurons, are affected. I will test this by using visual behavioral tests and stimulation with specific light patterns, these are experiments that can easily be done and something myself and other experts will work on together to accomplish.

My research programme will tell us how glia find their partner neurons, which cell adhesion molecules are important for glia to get their shapes and how they make sure our CNS function normally. These answers will be very important for understanding how our retinas and brains are built in the first place. If we understand how glia shape is set up then maybe it will be the same molecules to maintain the connections, so this will also be very important for keeping each part of the CNS healthy as we age. Finally, these behaviors and molecules might help with discovering drugs and treatments to change glial shape and make sure they connect to neurons and support them again. This will be very important for patients with neurodegenerative diseases, like Alzheimers, or retina degeneration (major cause of blindness).

Technical Summary

Glial morphogenesis is critical for establishing close contacts between glia and neuronal synapses. These close contacts are necessary for support functions and to ensure the proper function and maintenance of the nervous system. In this fellowship I will define the dynamic cell interactions leading to glial contacts with neurons in the synaptic layer of the retina, identify the role of cell adhesion molecules in guiding these contacts and determine the consequences on synapses if glial morphology is not properly established. Using time-lapse confocal microscopy on transgenic zebrafish I have characterised dynamic cell behaviors by Muller glia (MG), the principal glia in the retina, during development. I have carried out transcriptomics on these MG and through a reverse genetic screen identified five cell adhesion molecules (CAMs) that may regulate these morphogenic behaviours and neuronal contacts resulting in properly formed and functioning synaptic circuits. I will use cell specific reporters and antibody markers to define the precise contacts between mature MG in the retina with synapses, including visualising their dynamic sub-cellular interactions with precise neuronal circuits in the developing retina in real time in vivo. To determine the role of CAMs on these cell behaviours and synaptic contacts I will use established mutants, clonal analysis and the novel technique of CRISPRi to knockdown each CAM specifically in the MG. I will characterise the cell behaviors leading to morphogenesis defecrts and improper synaptic contacts, building a defined genetic pathway regulating morphogenesis. I will use mutants and/or CRISPRi to induce defined MG morphology defects and assay neuronal degeneration and synaptic function in the retina. Collectively this will allow me to define the importance of CAMs in the establishment of glial morphology to contact and support synapses, and determine their necessity for proper neuronal survival and function.

Planned Impact

Who will benefit from this research?
My proposed research programme will make an immediate impact on the fields of developmental neurobiology and glial biology. It falls directly in line with the BBSRCs remit of "healthy ageing across the lifecourse" as it will determine critical cellular and molecular mechanisms important for the establishment of glial morphology and synapse support. These mechanisms will have clear relevance for the maintenance of glial-synapse contacts potentially enhancing healthy ageing of the nervous system. The primary goal of my research programme is to produce novel knowledge that will benefit academics and clinicians in many fields, but it also has potential implications for patients. This research has direct relevance for people with retinal degenerations or visual impairments, as Muller glia are central to pathologies in most disease. However, the broader implications are for patients with neurodevelopmental disorders (Epilepsy) and neurodegenerative disease (Alzheimers) throughout the CNS. The majority of research focuses on neurons, ignoring an obvious and potentially central player: the glial cells. Glial cells are the support cells of the nervous system, as such the loss of glia contact with neurons would likely result in the loss of support and dysfunction. Thus, it is of the utmost importance to begin to understand the cellular and molecular mechanisms establishing the vital partnership between glia and neurons during nervous system development. As my proposal addresses several unexplored fundamental issues for proper nervous system development and function I feel that this is timely and given the ageing populations all over the world, including the UK, understanding fundamental mechanisms of brain health is imperative.

How will they benefit from this research?
The aim of this research is to tackle fundamental questions for proper nervous system development, with relevance to the maintenance of the CNS in ageing using the zebrafish retina as a model. The final aim is to determine the cellular and molecular mechanisms guiding glia cells to make contacts and support synapses, which may identify pathways for pharmacological or genetic intervention to treat or even reverse the devastating effects of neurodegenerative disease. As glia are modified and react in almost all neurological insults it has been proposed that glial cells are potential key targets for pharmacological intervention. For example, alterations in glial cell morphology and organisation have been noted in the epileptic brain (Oberheim et al. 2008, J Neurosci). Intriguingly, after drug treatment the astrocyte morphology domains recede and the seizures are reduced. This research may also provide genetic targets to screen for genetic counseling in neurodegenerative disorders and rare disease. To this affect I am a member of the Genomics England Clinical Interpretation Partnership. As such I have access to their large genomic datasets to identify human mutations that might implicate disruption of genetic pathways and glial morphology, such as cell adhesion molecules, and lead to the identification of currently unknown cellular processes resulting in disease or susceptibility to particular insults. An amazing property of Muller glia in the retina is they are a source of neuron regeneration after injury in lower vertebrates, and potentially mammals and humans. This is directly relevant to patients with many age-related eye diseases, such as macular degeneration, the leading cause of adult blindness. The datasets and mechanistic insights from this fellowship will therefore be of interest to researchers who wish to understand the mechanisms by which the retina regenerates, which embryonic programs are reactivated during the regenerative process, and how they might promote the integration of neurons and glia into damaged synaptic circuits to result in the regeneration of vision.

Publications

10 25 50
 
Description We have discovered that the ageing retina in a zebrafish looks very similar to the ageing human eye. This is important because the zebrafish has the impressive ability to regenerate, or regrow, its eye after damage (where humans do not). As such, it was assumed that any damage due to ageing in the zebrafish eye would be impossible to detect because they would just regrow the lost cells. However, we not only have shown that the zebrafish retina does not regenerate during chronic damage (like ageing) but also that the potential for regeneration is maintained throughout life. These are key considerations for using regenerative therapies and mechanisms to treat human retinal degenerations in the future.
Exploitation Route The mechanisms described here show that studying retinal degeneration in a zebrafish is not only possible but also mimics the human conditions, making them an excellent models to study all sorts of eye disease. Further, the mechanisms uncovered by us, and others, will be relevant for therapies in humans going forward.
Sectors Healthcare

Pharmaceuticals and Medical Biotechnology

URL https://onlinelibrary.wiley.com/doi/10.1111/acel.13597
 
Description Developing novel models to study mechanisms of retinal-vascular disease in real time in vivo
Amount £98,000 (GBP)
Funding ID GR001208 
Organisation Moorfields Eye Charity 
Sector Charity/Non Profit
Country United Kingdom
Start 07/2020 
End 03/2022
 
Description Generating Zebrafish Models To Study The Pathogenesis Of Retinal Degenerative Disease
Amount £110,000 (GBP)
Funding ID GR001148 
Organisation Moorfields Eye Charity 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2021 
End 01/2024
 
Description Moorfields Eye Charity Equipment Grant
Amount £86,582 (GBP)
Funding ID GR001114 
Organisation Moorfields Eye Charity 
Sector Charity/Non Profit
Country United Kingdom
Start 01/2020 
End 12/2020
 
Description Royal Society Research Grant
Amount £19,983 (GBP)
Funding ID RGS\R2\212357 
Organisation The Royal Society 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2022 
End 01/2023
 
Description Springboard Award
Amount £120,796 (GBP)
Funding ID 5879048 
Organisation Moorfields Eye Charity 
Sector Charity/Non Profit
Country United Kingdom
Start 03/2022 
End 10/2023
 
Description Wellcome Institutional Strategic Support Fund (ISSF3)
Amount £25,000 (GBP)
Funding ID ISSF3/ H17RCO/NG20 
Organisation Wellcome Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 07/2019 
End 07/2020
 
Title GliaMorph 
Description GliaMorph is a modular analysis toolkit developed to perform (1) image pre-processing, (2) semi-automatic region-of-interest selection, (3) apicobasal texture analysis, (4) glia segmentation, and (5) cell feature quantification. 
Type Of Material Physiological assessment or outcome measure 
Year Produced 2023 
Provided To Others? Yes  
Impact GliaMorph enables an in-depth understanding of MG morphology in the developing and diseased retina 
URL https://journals.biologists.com/dev/article/150/3/dev201008/286896/GliaMorph-a-modular-image-analysi...
 
Title GliaMorph Example Data 
Description Minimum example data for the GliaMorph data analysis toolkit and code review process. - https://github.com/ElisabethKugler/GliaMorph - Please contact kugler.elisabeth[at]gmail.com to request access to data and the repository. Conditions: - End-user wanting to contribute as a tester for GliaMorph AND/OR developer wanting to contribute to code-review - Reviewer(s) and/or editor(s) of journals where GliaMorph (and related) manuscripts are submitted 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
Impact GliaMorph Toolkit (developed by MacDonald lab) tester data - for validation and testing of open source software 
URL https://zenodo.org/record/5735442#.YjDW3y-l39M
 
Description Single cell resolution spatial transcriptomics in the zebrafish retina 
Organisation Resolve BioSciences GmbH
Country Germany 
Sector Private 
PI Contribution We have expertise, know-how, materials and data regarding zebrafish retinal biology, specifically acquisition and processing of zebrafish tissues for histological analysis. We provided the company with zebrafish retinal tissues for the molecular cartography technology.
Collaborator Contribution The partners provide probes against genes of interest and carry out the technique to label the cells and image them. They also provide platforms for analysis of results free in kind.
Impact None ot date
Start Year 2020
 
Description Single-cell sequencing of the ageing retina 
Organisation Stony Brook University
Country United States 
Sector Academic/University 
PI Contribution My research team are experts at fish models of the ageing retina.
Collaborator Contribution This is a partnership to exchange knowledge between a leading Killifish lab (Hu lab) and the Clark/Ruzycki lab on single-cell sequencing technologies. The Hu lab provides tissues for preliminary data and the Clark/Ruzycki labs facilitate access to specialised sequencing technologies and data analysis/storage.
Impact One grant application to the BBSRC
Start Year 2022
 
Description Single-cell sequencing of the ageing retina 
Organisation Washington University in St Louis
Country United States 
Sector Academic/University 
PI Contribution My research team are experts at fish models of the ageing retina.
Collaborator Contribution This is a partnership to exchange knowledge between a leading Killifish lab (Hu lab) and the Clark/Ruzycki lab on single-cell sequencing technologies. The Hu lab provides tissues for preliminary data and the Clark/Ruzycki labs facilitate access to specialised sequencing technologies and data analysis/storage.
Impact One grant application to the BBSRC
Start Year 2022
 
Title GliaMorph: A computational tool for glial morphology 
Description GliaMorph is a modular image analysis toolkit developed in Fiji to perform image pre-processing, semi-automatic ROI selection, apico-basal texture analysis, glia segmentation, and cell feature quantification. 
Type Of Technology Webtool/Application 
Year Produced 2022 
Open Source License? Yes  
Impact Collaborations, increased visibilty 
URL https://github.com/ElisabethKugler/GliaMorph
 
Description BBSRC Briefing - Exploring funding opportunities for researchers in Chemistry, School of Pharmacy and other biology related STEM areas 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Postgraduate students
Results and Impact In this session, we will explore BBSRC funding available in the above areas. A representative from the BBSRC Skills and Careers Unit will outline current funding opportunities and strategic priorities. We will then hear from successful BBSRC award holders on their experience of applying for funding. This half of the session will then wrap with a panel discussion and Q&A with speakers. The second half of the session will focus on BBSRC fellowships for early and intermediate career researchers and we have three of our UCL BBSRC fellows to speak about their fellowship experiences followed by a panel discussion and Q&A.
Year(s) Of Engagement Activity 2019
 
Description Donor relations: Peter Stebbings Trust/Moorfiedls Eye Charity project update 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Myself and Dr. Elisabeth Kugler updated the Peter Stebbings Trust with our research progress. The trust funded part of the MEC Springboard award with Moorfields Eye Charity.
Year(s) Of Engagement Activity 2021
 
Description Moorfields Eye Charity Donor Event 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Supporters
Results and Impact Charity evening event for donors to Moorfields Eye Charity
Year(s) Of Engagement Activity 2021
URL https://moorfieldseyecharity.org.uk/projects-we-fund/a-new-zebrafish-facility-to-help-study-eye-dise...
 
Description Moorfields Eye Charity Lunch and Learn 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Supporters
Results and Impact I presented my fellowship and laboratories work on zebrafish retinal development to the charity, funders and donors over a one hour lunch session. It was very well attended and I engaged a number of people from different sectors. I've been asked to be featured in the newsletter, take potential donors on lab visits and provide content for their website.
Year(s) Of Engagement Activity 2020
 
Description Opinion Piece 
Form Of Engagement Activity A magazine, newsletter or online publication
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Published an opinion piece in the Royal Microscopical Society
Year(s) Of Engagement Activity 2022
URL https://www.rms.org.uk/library/infocus-magazine/infocus-listing/microscopy-approaches-in-zebrafish.h...
 
Description Rank Prize Seeing Science Competition - Winner 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Winner - Rank Prize photography competition
https://www.rankprize.org/seeing-science-photography-competition/
Year(s) Of Engagement Activity 2021
URL https://www.rankprize.org/seeing-science-photography-competition/
 
Description Things I should know Seminar: Fellowship applications 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact Myself and two other BBSRC funded researchers presented to the ECRs art the Rothamstead Institute on fellowships providing them with an overview, our experiences and tops for their success.
Year(s) Of Engagement Activity 2021