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X-Genix: Translating precision molecular editing as a tool for drug discovery

Lead Research Organisation: University of St Andrews
Department Name: Chemistry

Abstract

This proposal builds directly upon a BBSRC FoF awarded in 2020 toward the translation of enzymatic methods of carbon halogen bond formation.
Context:
Over 20% of pharmaceuticals, including drugs such as Clarityn, require a carbon chlorine bond. A carbon halogen bond, conveniently referred to as a C-X bond by chemists (where X is typically chlorine, bromine, or iodine),
imparts improved activity and bioavailability. Drugs containing this "X-factor" are used to treat medical conditions such as cancer, diabetes, high cholesterol, stomach ulcers, anaemia, asthma, epilepsy, and others. This
C-X bond provides a useful handle for tuning the pharmaceutical's activity and bioavailability profiles, its installation is, therefore, essential to drug discovery. Furthermore, this C-X bond is a chemically reactive and
orthogonal handle, a gateway to almost any chemical diversification imaginable. The construction of over 90% of small molecule pharmaceuticals is thus reliant on carbon-chlorine bond formation.
Current chemical halogenation methods lack selectivity. Our enzyme technology can be used to precisely place a C-X bond at just the position required.
Scope: We are paving the way for spinning out X-Genix; a company that provides bespoke technology enabling precision molecule editing.
The award of a BBSRC FoF in 2020 has enabled us to develop our technology and carry out customer discovery, identifying pharmaceutical drug discovery as our beachhead market. Our ambition is to partner with the pharmaceutical industry to deliver precision molecule editing for drug discovery.
Here, as we prepare for spin out, we will deliver the following Commercial and Technical objectives (C1- C4, and T1-T4 respectively):
1. Details
C1. Extend and deepen our engagement with Pharma: We are already in discussions with team leaders, CEOs, and/or CSO/CTOs in over 20 pharmaceutical and fine chemical companies in the UK and internationally. Through components of this project, especially C2, we will deepen existing relationships.
Through links with CEFIC and EFPIA, we will increase our number of industry partnerships.
C2. Deliver proof of concept projects: Testing the selection and utilisation of halogenases for molecules of interest to Astra Zeneca and Concept/Malvern, provided under confidentiality agreements. These studies
will showcase the technology and will be key to refining our commercial offering, poising the team and technology to deliver commercial contracts by the end of the grant.
C3. Refine Business Plan: By building on insight from C1& C2, developments in T3, and through mentoring from UK and international advisors.
C4. Investor-Ready Proposition for Seed Funding: This project prepares X-Genix to be investor ready. Working in partnership with international investors and advisors we will further develop our pitch deck
and investment ask.
T1. Extend our portfolio of halogenases to 200: Ensuring a robust and diverse toolbox of biocatalysts.
T2. Refine and prepare for filing a further patent on our halogenase selection and optimisation technology: Focusing on developments that enable expeditious discovery of an enzyme capable of regioselectively functionalising a given substrate.
T3. Extend our IP, showcasing our technology on medicinally relevant compounds within our own drug discovery program: Further growing investable value. Benefiting from the considerable med chem expertise across our team and advisory board, and levering technology advancements from T1/T2 this
aspect will become a main focus of X-Genix. This focus is based on advice received throughout our early business development work.
T4. Explore intensifying and scaling reactions: We will further develop our technology, exploring reaction intensification and scaling.

Publications

10 25 50
 
Description New methodology has been developed enabling substrates to be predicted for an enzyme.

This translational award has been exceptionally useful in preparation of X-Genix for spinout
Exploitation Route The principles of predicting the substrates that an enzyme can process will be valuable to others: two publications pending here, and possibly a further patent to be drafted.
Sectors Agriculture

Food and Drink

Chemicals

Environment

Manufacturing

including Industrial Biotechology

Pharmaceuticals and Medical Biotechnology

 
Description The pathway has been paved for the spin out of X-Genix
First Year Of Impact 2024
Sector Chemicals,Manufacturing, including Industrial Biotechology,Pharmaceuticals and Medical Biotechnology
Impact Types Economic

 
Description PRecision, Innovative, Molecular EDiting: PRIMED for Diversification
Amount £1,507,310 (GBP)
Funding ID EP/Z533610/1 
Organisation Engineering and Physical Sciences Research Council (EPSRC) 
Sector Public
Country United Kingdom
Start 03/2025 
End 02/2030
 
Description Astra Zeneca: as named on application 
Organisation AstraZeneca
Country United Kingdom 
Sector Private 
PI Contribution Compounds from AZ received and tested in enzyme assays. Characterisation of products from assays ongoing.
Collaborator Contribution Provision of compounds. Discussions on new compounds, opportunities and scale up.
Impact Investigations ongoing, and inputting into technology development.
Start Year 2020
 
Description Concept Life Science 
Organisation Concept Life Sciences
Country United Kingdom 
Sector Private 
PI Contribution New collaboration with concept life science
Collaborator Contribution New compounds being provided for testing the technology
Impact Early stages
Start Year 2024
 
Description DNA Encoded Library : Newcastle 
Organisation Newcastle University
Country United Kingdom 
PI Contribution Testing our technology on the DEL presented compounds
Collaborator Contribution Providing DEL compounds
Impact Early stage
Start Year 2024
 
Description Enzymes in Flow 
Organisation University of Bern
Country Switzerland 
Sector Academic/University 
PI Contribution Exploring our enzymes in flow
Collaborator Contribution They have made their expertise in handling enzymes in flow, and use of their flow reactor available to us
Impact Early stage
Start Year 2024
 
Company Name X-Genix Newco Limited 
Description  
Year Established 2024 
Impact This grant helped pave the way to spin out. The company enables direct access to excellent, but otherwise hard to reach med-chem space
 
Description A Presentation to the Scottish Secondary School Science Teachers Symposium 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact A presentation was given outlying the frontier of research into new antibiotics, and highlighting challenges with AMR.
Year(s) Of Engagement Activity 2023
 
Description CEFIC Anniversary Meeting: Member of 4 member panel , along with CEOs of Solvay, BASF and a Nobel prize winner 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Highlighting challenges and opportunities for blue skies science informing sustainable manufacture.
Year(s) Of Engagement Activity 2023
 
Description Cafe Scientifique 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Other audiences
Results and Impact Pitlochry and Dunkeld Cafe Scientifiquw
Year(s) Of Engagement Activity 2024
 
Description Daniel Lecture: "Building Molecules Sustainably" To ~600 15-18 year old school children interested in science, with a further 400+ views on line 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Schools
Results and Impact A talk and demonstration lecture that was live streamed, and is now present on youtube
Year(s) Of Engagement Activity 2024
URL https://www.kcl.ac.uk/events/daniell-lecture-2024
 
Description One of two entrepreneurial showcase talks in Scottish Parliament 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Industry/Business
Results and Impact One of two talks given by spin out founders at a Converge organised evening reception in Scottish Parliament
Year(s) Of Engagement Activity 2024