X-Genix: Translating precision molecular editing as a tool for drug discovery
Lead Research Organisation:
University of St Andrews
Department Name: Chemistry
Abstract
This proposal builds directly upon a BBSRC FoF awarded in 2020 toward the translation of enzymatic methods of carbon halogen bond formation.
Context:
Over 20% of pharmaceuticals, including drugs such as Clarityn, require a carbon chlorine bond. A carbon halogen bond, conveniently referred to as a C-X bond by chemists (where X is typically chlorine, bromine, or iodine),
imparts improved activity and bioavailability. Drugs containing this "X-factor" are used to treat medical conditions such as cancer, diabetes, high cholesterol, stomach ulcers, anaemia, asthma, epilepsy, and others. This
C-X bond provides a useful handle for tuning the pharmaceutical's activity and bioavailability profiles, its installation is, therefore, essential to drug discovery. Furthermore, this C-X bond is a chemically reactive and
orthogonal handle, a gateway to almost any chemical diversification imaginable. The construction of over 90% of small molecule pharmaceuticals is thus reliant on carbon-chlorine bond formation.
Current chemical halogenation methods lack selectivity. Our enzyme technology can be used to precisely place a C-X bond at just the position required.
Scope: We are paving the way for spinning out X-Genix; a company that provides bespoke technology enabling precision molecule editing.
The award of a BBSRC FoF in 2020 has enabled us to develop our technology and carry out customer discovery, identifying pharmaceutical drug discovery as our beachhead market. Our ambition is to partner with the pharmaceutical industry to deliver precision molecule editing for drug discovery.
Here, as we prepare for spin out, we will deliver the following Commercial and Technical objectives (C1- C4, and T1-T4 respectively):
1. Details
C1. Extend and deepen our engagement with Pharma: We are already in discussions with team leaders, CEOs, and/or CSO/CTOs in over 20 pharmaceutical and fine chemical companies in the UK and internationally. Through components of this project, especially C2, we will deepen existing relationships.
Through links with CEFIC and EFPIA, we will increase our number of industry partnerships.
C2. Deliver proof of concept projects: Testing the selection and utilisation of halogenases for molecules of interest to Astra Zeneca and Concept/Malvern, provided under confidentiality agreements. These studies
will showcase the technology and will be key to refining our commercial offering, poising the team and technology to deliver commercial contracts by the end of the grant.
C3. Refine Business Plan: By building on insight from C1& C2, developments in T3, and through mentoring from UK and international advisors.
C4. Investor-Ready Proposition for Seed Funding: This project prepares X-Genix to be investor ready. Working in partnership with international investors and advisors we will further develop our pitch deck
and investment ask.
T1. Extend our portfolio of halogenases to 200: Ensuring a robust and diverse toolbox of biocatalysts.
T2. Refine and prepare for filing a further patent on our halogenase selection and optimisation technology: Focusing on developments that enable expeditious discovery of an enzyme capable of regioselectively functionalising a given substrate.
T3. Extend our IP, showcasing our technology on medicinally relevant compounds within our own drug discovery program: Further growing investable value. Benefiting from the considerable med chem expertise across our team and advisory board, and levering technology advancements from T1/T2 this
aspect will become a main focus of X-Genix. This focus is based on advice received throughout our early business development work.
T4. Explore intensifying and scaling reactions: We will further develop our technology, exploring reaction intensification and scaling.
Context:
Over 20% of pharmaceuticals, including drugs such as Clarityn, require a carbon chlorine bond. A carbon halogen bond, conveniently referred to as a C-X bond by chemists (where X is typically chlorine, bromine, or iodine),
imparts improved activity and bioavailability. Drugs containing this "X-factor" are used to treat medical conditions such as cancer, diabetes, high cholesterol, stomach ulcers, anaemia, asthma, epilepsy, and others. This
C-X bond provides a useful handle for tuning the pharmaceutical's activity and bioavailability profiles, its installation is, therefore, essential to drug discovery. Furthermore, this C-X bond is a chemically reactive and
orthogonal handle, a gateway to almost any chemical diversification imaginable. The construction of over 90% of small molecule pharmaceuticals is thus reliant on carbon-chlorine bond formation.
Current chemical halogenation methods lack selectivity. Our enzyme technology can be used to precisely place a C-X bond at just the position required.
Scope: We are paving the way for spinning out X-Genix; a company that provides bespoke technology enabling precision molecule editing.
The award of a BBSRC FoF in 2020 has enabled us to develop our technology and carry out customer discovery, identifying pharmaceutical drug discovery as our beachhead market. Our ambition is to partner with the pharmaceutical industry to deliver precision molecule editing for drug discovery.
Here, as we prepare for spin out, we will deliver the following Commercial and Technical objectives (C1- C4, and T1-T4 respectively):
1. Details
C1. Extend and deepen our engagement with Pharma: We are already in discussions with team leaders, CEOs, and/or CSO/CTOs in over 20 pharmaceutical and fine chemical companies in the UK and internationally. Through components of this project, especially C2, we will deepen existing relationships.
Through links with CEFIC and EFPIA, we will increase our number of industry partnerships.
C2. Deliver proof of concept projects: Testing the selection and utilisation of halogenases for molecules of interest to Astra Zeneca and Concept/Malvern, provided under confidentiality agreements. These studies
will showcase the technology and will be key to refining our commercial offering, poising the team and technology to deliver commercial contracts by the end of the grant.
C3. Refine Business Plan: By building on insight from C1& C2, developments in T3, and through mentoring from UK and international advisors.
C4. Investor-Ready Proposition for Seed Funding: This project prepares X-Genix to be investor ready. Working in partnership with international investors and advisors we will further develop our pitch deck
and investment ask.
T1. Extend our portfolio of halogenases to 200: Ensuring a robust and diverse toolbox of biocatalysts.
T2. Refine and prepare for filing a further patent on our halogenase selection and optimisation technology: Focusing on developments that enable expeditious discovery of an enzyme capable of regioselectively functionalising a given substrate.
T3. Extend our IP, showcasing our technology on medicinally relevant compounds within our own drug discovery program: Further growing investable value. Benefiting from the considerable med chem expertise across our team and advisory board, and levering technology advancements from T1/T2 this
aspect will become a main focus of X-Genix. This focus is based on advice received throughout our early business development work.
T4. Explore intensifying and scaling reactions: We will further develop our technology, exploring reaction intensification and scaling.
Organisations
- University of St Andrews (Lead Research Organisation)
- NEWCASTLE UNIVERSITY (Collaboration)
- AstraZeneca (Collaboration)
- Concept Life Sciences (Collaboration, Project Partner)
- University of Bern (Collaboration)
- AstraZeneca (Project Partner)
- Industrial Biotech Innovation Centre (Project Partner)
- Newcastle University (Project Partner)
- Marco Mensink (Project Partner)
- RJT Connect (Project Partner)
- Private Address (Project Partner)
- Stefan Oschmann (Project Partner)
- Neil Carr (Project Partner)
- Nathalie Moll (Project Partner)
- Angel Resource Institute (ARI) (Project Partner)
- Una Ryan (Project Partner)
People |
ORCID iD |
| Rebecca Goss (Principal Investigator) |
| Description | New methodology has been developed enabling substrates to be predicted for an enzyme. This translational award has been exceptionally useful in preparation of X-Genix for spinout |
| Exploitation Route | The principles of predicting the substrates that an enzyme can process will be valuable to others: two publications pending here, and possibly a further patent to be drafted. |
| Sectors | Agriculture Food and Drink Chemicals Environment Manufacturing including Industrial Biotechology Pharmaceuticals and Medical Biotechnology |
| Description | The pathway has been paved for the spin out of X-Genix |
| First Year Of Impact | 2024 |
| Sector | Chemicals,Manufacturing, including Industrial Biotechology,Pharmaceuticals and Medical Biotechnology |
| Impact Types | Economic |
| Description | PRecision, Innovative, Molecular EDiting: PRIMED for Diversification |
| Amount | £1,507,310 (GBP) |
| Funding ID | EP/Z533610/1 |
| Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2025 |
| End | 02/2030 |
| Description | Astra Zeneca: as named on application |
| Organisation | AstraZeneca |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | Compounds from AZ received and tested in enzyme assays. Characterisation of products from assays ongoing. |
| Collaborator Contribution | Provision of compounds. Discussions on new compounds, opportunities and scale up. |
| Impact | Investigations ongoing, and inputting into technology development. |
| Start Year | 2020 |
| Description | Concept Life Science |
| Organisation | Concept Life Sciences |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | New collaboration with concept life science |
| Collaborator Contribution | New compounds being provided for testing the technology |
| Impact | Early stages |
| Start Year | 2024 |
| Description | DNA Encoded Library : Newcastle |
| Organisation | Newcastle University |
| Country | United Kingdom |
| PI Contribution | Testing our technology on the DEL presented compounds |
| Collaborator Contribution | Providing DEL compounds |
| Impact | Early stage |
| Start Year | 2024 |
| Description | Enzymes in Flow |
| Organisation | University of Bern |
| Country | Switzerland |
| Sector | Academic/University |
| PI Contribution | Exploring our enzymes in flow |
| Collaborator Contribution | They have made their expertise in handling enzymes in flow, and use of their flow reactor available to us |
| Impact | Early stage |
| Start Year | 2024 |
| Company Name | X-Genix Newco Limited |
| Description | |
| Year Established | 2024 |
| Impact | This grant helped pave the way to spin out. The company enables direct access to excellent, but otherwise hard to reach med-chem space |
| Description | A Presentation to the Scottish Secondary School Science Teachers Symposium |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other audiences |
| Results and Impact | A presentation was given outlying the frontier of research into new antibiotics, and highlighting challenges with AMR. |
| Year(s) Of Engagement Activity | 2023 |
| Description | CEFIC Anniversary Meeting: Member of 4 member panel , along with CEOs of Solvay, BASF and a Nobel prize winner |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Highlighting challenges and opportunities for blue skies science informing sustainable manufacture. |
| Year(s) Of Engagement Activity | 2023 |
| Description | Cafe Scientifique |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Other audiences |
| Results and Impact | Pitlochry and Dunkeld Cafe Scientifiquw |
| Year(s) Of Engagement Activity | 2024 |
| Description | Daniel Lecture: "Building Molecules Sustainably" To ~600 15-18 year old school children interested in science, with a further 400+ views on line |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Schools |
| Results and Impact | A talk and demonstration lecture that was live streamed, and is now present on youtube |
| Year(s) Of Engagement Activity | 2024 |
| URL | https://www.kcl.ac.uk/events/daniell-lecture-2024 |
| Description | One of two entrepreneurial showcase talks in Scottish Parliament |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Industry/Business |
| Results and Impact | One of two talks given by spin out founders at a Converge organised evening reception in Scottish Parliament |
| Year(s) Of Engagement Activity | 2024 |