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Plant Signalling mechanism enabling nitrogen-fixing bacteria internalization in legume root nodule

Lead Research Organisation: JOHN INNES CENTRE

Abstract

Nitrogen is one of the most limiting nutrients for plants. Despite its abundance in the atmosphere, plants cannot directly utilize atmospheric dinitrogen (N2). Their growth relies entirely on fixed nitrogen obtained either from soil nitrogen-fixing bacteria, a process called biological nitrogen fixation, or from the intensive application of nitrate and ammonium fertilizers. The latter has emerged as the main method to boost crop productivity since the mid-1900s. However, this practice has inflicted considerable damage on our environment. As a result, a significant challenge is the reduction of inorganic fertilizer usage within agricultural practice.

Root legume endosymbiosis is one of the most efficient biological nitrogen fixation processes in which nitrogen fixing bacteria, so called rhizobia, are directly delivered within the cells of a new plant organ, the root nodule. The root nodule provides cellular microaerobic conditions for bacterial nitrogenase activity and atmospheric dinitrogen fixation. Although root legume endosymbiosis has been studied for decades, the signalling mechanism controlling the internalization of rhizobia within the root nodule cells has remained a central enigma and represents a cross-kingdom interaction that defies conventional boundaries in biological relationship. This biological process draws parallels to the endosymbiotic theory, which explains the evolution of eukaryotic cells by incorporation of free-living procaryotic cells. However, in root endosymbiosis, the internalization is not an historical relic but an ongoing, dynamic process with ecological and agricultural implications. Here, we aim to uncover and characterize the signalling pathway and mechanism allowing internalization of nitrogen-fixing rhizobia into root nodule cells. By combining state-of-the-art cell biology, molecular genetics, proteomics and single cell RNA sequencing technologies, we will identify the key factors and the minimal cellular program that enable rhizobia internalization into nodule cells.

The significance of this research directly aligns with the BBSRC strategic priorities, encompassing "Understanding the rules of life" by delving into molecular processes governing bacteria endocytosis into host membrane-bound compartments. This research also resonates with BBSRC goals of "Bioscience for sustainable agriculture and food". Understanding and harnessing the potential of nitrogen-fixing bacteria have implications for improving crop production, promoting environmental sustainability, and advancing agricultural practices that are both productive and ecologically responsible.

Publications

10 25 50
 
Description Professor Ingo Dreyer 
Organisation University of Talca
Country Chile 
Sector Academic/University 
PI Contribution My contribution to this collaboration has been primarily intellectual, providing biological expertise to guide the development of mathematical models. I worked closely with the mathematical modeller and physicist to help define the key biological questions, interpret experimental observations, and ensure that the modelling framework accurately reflects the underlying biological processes. This interdisciplinary exchange enabled the integration of biological knowledge with quantitative modelling approaches, helping to develop models that can address biologically relevant questions and generate testable hypotheses. The collaboration strengthened the connection between experimental plant biology and theoretical modelling, supporting a more mechanistic understanding of the biological system under study.
Collaborator Contribution The collaborator contributed expertise in mathematical modelling and quantitative analysis to support the development of theoretical frameworks addressing the biological questions underpinning the project. They developed and implemented mathematical models to explore the dynamics of the biological system and to test hypotheses arising from experimental observations.
Impact This collaboration has resulted in the submission of a joint manuscript that integrates experimental biological data with quantitative modelling approaches. The work represents a key outcome of the partnership and reflects the close interaction between experimental and theoretical perspectives developed during the project. The collaboration is multidisciplinary, bringing together expertise from plant biology, mathematical modelling, and physics.
Start Year 2025