Bacterial hydrogenases for biohydrogen technology

Lead Research Organisation: University of Dundee
Department Name: College of Life Sciences

Abstract

Hydrogen gas is among a 'basket of solutions' for future energy needs. At present 99% of hydrogen is produced by reforming fossil fuels and 1% comes from electrolysis. Most is used directly by industry, but increasingly it is being used as a fuel. Hydrogen has the highest energy per weight of any fuel, and its use (particularly in a fuel cell) is clean and efficient. As the immediate product of energizing water by photolysis (sunlight) or renewable-powered electrolysis, hydrogen is the 'greenest' and most renewable of fuels. This fact is attracting major research funding in advanced countries, particularly USA, Australia, Germany and Sweden. The drawbacks of hydrogen are frequently voiced - low energy density, difficulty in storage (a disadvantage for small vehicles), primitive supply and distribution infrastructure - but these issues cannot hold back its development, and H2 will eventually be an important and even dominant part of human lives and economies. Biohydrogen is the production or oxidation of hydrogen by organisms. The scope for tapping into this resource constructively is enormous; yet hydrogen is also a nutrient for pathogens. Hydrogen is a byproduct of ammonia synthesis by microorganisms contained in plant root nodules, using an enzyme (catalyst) known as nitrogenase. Hydrogen is also produced and used as a fuel by a vast range of microorganisms. The chemistry depends upon oxygen-sensitive enzymes known as hydrogenases, which are essential to much of the microbial world, including strict soil aerobes, green algae that can be adapted to produce hydrogen, methane-producers, and some notorious human pathogens such as Helicobacter and Salmonella. Indeed, the efficiency of hydrogenases is crucial to bacterial virulence. We and others have proposed that the active sites of hydrogenases are as active as platinum - an expensive and limited resource. This has raised interest in their exploitation as actual or inspirational catalysts in electronic/fuel cell/sensor devices. Understanding and consequently being able to control the activity and oxygen-tolerance of hydrogenases within the cell are therefore among the most important factors in bringing about a future, fully renewable, and healthy H2 energy technology. The Oxford and Dundee laboratories are superbly complementary. The Dundee group has internationally-recognised expertise in studying the cell biology of hydrogenases in the common gut bacterium E. coli and the notorious pathogen, Salmonella. The Oxford group have pioneered a physical method for studying hydrogenases, which reveals, rapidly and accurately, all of their important catalytic properties. The method is an electrochemical technique known as protein film electrochemistry, and it involves the enzyme being attached to an electrode surface. The precise data that are obtained help guide further investigations, saving large amounts of research time and money that is spent worldwide on developing biohydrogen. The attachment of the enzyme molecule to an electrode is analogous to 'wiring' it to an electrical circuit, and in the process the enzyme is able to function as a practical electrocatalyst, able to produce electricity from hydrogen or hydrogen from electricity or light (if the enzyme is attached to light-sensitive particles).

Technical Summary

Biohydrogen is the production or oxidation of H2 by organisms. The scope for tapping into this resource for future energy is enormous; yet H2 is also a nutrient for pathogens. Hydrogen is produced and oxidised by a vast range of microorganisms, mainly using oxygen-sensitive enzymes known as hydrogenases. Hydrogen-based metabolism is essential for strict soil aerobes, methane-producers, notorious human pathogens such as Helicobacter and Salmonella, and even green algae that produce H2. The active sites contain Fe or Fe and Ni, coordinated by the unusual ligands CO and CN?, and we and others have proposed that the active sites of hydrogenases are as active as platinum - an expensive and limited resource. This has raised interest in their exploitation as actual or inspirational catalysts in electronic/fuel cell/sensor devices. Understanding the activity and O2-sensitivity of hydrogenases in organisms is one of the most important factors in bringing about a future, fully renewable, and healthy H2 energy technology. The Oxford and Dundee laboratories are superbly complementary. The Dundee group has internationally-recognised expertise in cell and molecular biology of hydrogenases, particularly E. coli and Salmonella. The Oxford group have pioneered a physical method- protein film electrochemistry- for studying hydrogenases; this reveals, rapidly and accurately, all important catalytic properties, with the enzyme attached to an electrode surface. The catalytic activity is recorded as electrical current and enzyme reactions are controlled through the electrode potential. The precise data that are obtained guide further investigations, saving large amounts of research time and money. Attaching an enzyme molecule to an electrode is analogous to 'wiring' it to an electrical circuit: the enzyme becomes a practical electrocatalyst, able to produce electricity from H2,, or H2 from electricity (or light, if attached to a photosensitive particle).

Publications

10 25 50

publication icon
Kelly CL (2015) Integration of an [FeFe]-hydrogenase into the anaerobic metabolism of Escherichia coli. in Biotechnology reports (Amsterdam, Netherlands)

publication icon
Lazarus O (2009) Water-gas shift reaction catalyzed by redox enzymes on conducting graphite platelets. in Journal of the American Chemical Society

publication icon
McDowall JS (2014) Bacterial formate hydrogenlyase complex. in Proceedings of the National Academy of Sciences of the United States of America

publication icon
Parkin A (2012) The hows and whys of aerobic H2 metabolism. in Current opinion in chemical biology

publication icon
Wulff P (2016) How the oxygen tolerance of a [NiFe]-hydrogenase depends on quaternary structure. in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry

publication icon
Wulff P (2014) How oxygen reacts with oxygen-tolerant respiratory [NiFe]-hydrogenases. in Proceedings of the National Academy of Sciences of the United States of America

 
Description This project was a study of enzymes called hydrogenases from the bacterium Escherichia coli. The project is a collaboration between Oxford and Dundee. Hydrogenases are metal containing enzymes that can consume, or produce, hydrogen gas. We have isolated two of the three hydrogenases from E. coli. By attaching these enzymes to graphite electrodes it was shown that Hyd-1 is an oxygen-tolerant enzyme, while Hyd-2 is oxygen sensitive. Hyd-2 is a good hydrogen producing enzyme, however, and was coupled to a carbon monoxide dehydrogenase in order to re-produce the water-gas shift reaction with biological parts.
In addition, the hydrogenases of the pathogen Salmonella enterica were isolated and studied here.
Overall, this was a hugely successful project reporting crystal structures; molecular mechanisms; applications; and more. One minor part of this proposal was to engineer an [FeFe]-hydrogenase from a hyperthermophile into E. coli - and this part of the work has finally been published.
Exploitation Route The research is currently at too early a stage for exploitation, but, potentially, hydrogenases could be connected to electrode to produce electricity. This has currently been demonstrated as a proof-of-principle only.
Sectors Chemicals,Creative Economy,Electronics,Energy,Environment

 
Description Several papers have been published from this work, which have influenced scientists around the world.
First Year Of Impact 2010
Sector Energy
 
Description Cafe Scientifique 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Invitation to present to Cafe Scientifique (Stockton-on-Tees branch) on 20 October 2020. Event moved on-line due to Coronavirus Pandemic. There were >50 participants on the Zoom session located around the UK. They bought me some cheese from Wensleydale Creamery as a 'thank you'.
Year(s) Of Engagement Activity 2020
 
Description Magnificent Microbes 2012 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Type Of Presentation Workshop Facilitator
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact This was a two-day event at Dundee Science Centre. On day one (a Friday), 180 primary school prupils attended. On day-two 600 members of the public attended. There were several interactive stalls educating on many different aspects of microbiology. There were no stuffy presentations from boring old professors. It was fun, interactive and informative.

Interest from the local media (The Courier newspaper) and from BBSRC public engagement officers.
Year(s) Of Engagement Activity 2010,2012
 
Description Magnificent Microbes 2018 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact This was a two-day event designed by academics and staged at Dundee Science Centre. Several interactive stalls were set up and these were used to stimulate discussions with the visiting public. The first day involved visits from selected primary schools from the East of Scotland. The second day was open to the general public. The media were invited and many interviews took place.
Year(s) Of Engagement Activity 2018
URL https://www.dundee.ac.uk/news/2018/university-scientists-aim-to-inspire-with-celebration-of-life-in-...