Modification of carbohydrate quality in cereals and its consequences for digestion and metabolism

Lead Research Organisation: Quadram Institute Bioscience
Department Name: Contracts

Abstract

Starches from different botanical origins and genetic backgrounds, subjected to different processing conditions in different matrices are digested at different rates in the small intestine. Subsequently different amounts of this starch, with differing structural properties, will reach the large intestine, termed resistant starch (RS). The structure and amount of starch that reaches the large intestine may have a significant effect on rates of microbial fermentation, and on the microbial community composition, resulting in differing fermentation end-points. Pathways of starch fermentation in vivo in the large intestine, and the influence of different physical forms of starch, are not fully understood. I aim to explore how differences in cereal starch molecular structure can influence digestion and fermentation.
In collaboration with JIC we will use wheat and/or barley with mutations in starch biosynthetic pathway giving rise to alterations in starch structure in plants with defined genetic backgrounds. The molecular and physical structure of these starches will be characterised using a range of physical methods, and in vitro digestion kinetics will be determined using the latest kinetic models. Mutations in the biosynthetic pathway of starches may alter the amylose/amylopectin ratio, as well as more subtle effects on branching patterns and chain length distributions. The effects of mutations on starch structure during processing will be characterised to determine their influence on digestion and microbial fermentation.
Using foods made from these substrates, which have had their physical structure and in vitro digestibility highly characterised, we will carry out in vitro fermentation and in vivo human feeding studies. Microbial samples from these studies will be subjected to metagenomic and metatranscriptomic analysis allowing a detailed exploration of the changes in microbial communities and starch degradation pathways in response to different starch structures.

Publications

10 25 50

 
Description A number of important developments have emerged from this research. The development of a UPLC based SEC method for analysing biopolymers has led to a step change in our ability to rapidly analyse starch molecular structure , reducing analysis time from 1hr to under 10 min per sample. This opens up the potential to screen large numbers of starch samples from breeding programmes for potentially beneficial nutritional properties, which was not previously possible.
We have also developed a novel rapid starch digestion protocol, which we have applied to a range of food materials including unique high amylose pea varieties. This advance will allow rapid screening of foods for glycaemic response, including innovative crop varieties produce from crop breeding programmes.
Exploitation Route These innovative methods can be used by acadmics to develop novel slowly digestible starch based foods.
Sectors Agriculture, Food and Drink

 
Description Marie Curie Fellowship FABCARB
Amount £180,000 (GBP)
Funding ID FABCARB 
Organisation European Commission H2020 
Sector Public
Country Belgium
Start 03/2017 
End 03/2019
 
Title UPLC-SEC for analysis of biological polymers 
Description Size Exclusion Chromatography has recently been adapted as a method for use with UPLC based separation, rather than HPLC. In this grant, we have carried out the first demonstration of the use of this technology with biological polymers. This will increase the resolution and speed with which biological polymers can be analysed. 
Type Of Material Technology assay or reagent 
Year Produced 2018 
Provided To Others? Yes  
Impact N/A- the method is very recently developed 
 
Description Developing UPLC-SEC 
Organisation John Innes Centre
Country United Kingdom 
Sector Academic/University 
PI Contribution Working together we have developed a novel high throughput method for analysing starch fine structure
Collaborator Contribution Partners at John Innes have provided starches from breeding programmes with unique starch structures, which have been analysed using our newly developed techniques
Impact Multi-disciplinary between analytical chemistry and plant sciences. One paper is currently under review, with another expected int he future.
Start Year 2017
 
Description HUNGer consortium 
Organisation Campden BRI
Country United Kingdom 
Sector Private 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description HUNGer consortium 
Organisation Imperial College London
Country United Kingdom 
Sector Academic/University 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description HUNGer consortium 
Organisation Queen Mary University of London
Country United Kingdom 
Sector Academic/University 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description HUNGer consortium 
Organisation St Johns Research Institute
Country India 
Sector Academic/University 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description HUNGer consortium 
Organisation University of Glasgow
Country United Kingdom 
Sector Academic/University 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description HUNGer consortium 
Organisation World Health Organization (WHO)
Country Global 
Sector Public 
PI Contribution As part of this project we carried out in vitro fermentation's of various fibres using microbiota from children with severe acute malnutrition, demonstrating the limited capability of these children to ferment certain dietary fibres, e.g. inulin. QIB has provided expertise in and access to fermentation systems and DNA sequencing
Collaborator Contribution This is a large, multi-disciplinary collaboration with partners contributing many parts, including nutritionists, metobolomics specialists, gastronenterologists and many others. Specifically, collaborators have provided access to faecal samples from children with SAM, and access to metabolomics facilities at Imperial.
Impact https://www.imperial.ac.uk/media/imperial-college/medicine/hunger-project/Hunger-Project-White-Paper-2019-01-09.pdf
Start Year 2018
 
Description PepsiCo-QIB collaboration 
Organisation PepsiCo
Country United States 
Sector Private 
PI Contribution PepsiCo support two PhD students working on starch digestion in my research group. The first works on legume enriched snack digestion, and the second student works on polyphenol inhibition of starch digestion.
Collaborator Contribution SUpporting two iCASE studentships, as well as providing faciltiies for snack processing.
Impact Two funded studentships
Start Year 2017