Delivering Sustainable Wheat: Targeted Sustainability-Trait Discovery (John Innes Centre)

Lead Research Organisation: John Innes Centre
Department Name: UNLISTED

Abstract

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Technical Summary

WP1 addresses resource capture and utilisation efficiency to achieve sustainable wheat yield quality and stability. Increasing production costs (e.g. fertilizers) and a need to decrease the carbon footprint of farming demand improvements in efficiency. This includes addressing changes in farming practices such as the rise of reduced till or regenerative agriculture due to the major impact these have on soil structure13. A focus of WP1 is to enhance root and canopy carbon sequestration and improve N P minerals (such as Zn) and water use efficiency. However as yield remains a key commercial target and is essential for global food security aspects of yield components trait tradeoffs and challenges arising from climate change are addressed14. WP1 will study root canopy inflorescence and grain development using physiology genetics hormone profiling metabolite analyses and genomics to reveal haplotypes associated with these key sustainability traits the integration of these processes and the impacts on plant development in fluctuating environments.

WP1 will (1) dissect G x E x M interactions for nutrient acquisition water and light use efficiency and carbon capture and develop/identify germplasm able to exploit reduced inputs and no-till farming (2) deliver increase yield yield stability and efficiency gains via the Breeders Toolkit (BTK) improving or understanding of the physiological and molecular basis of these key components of productivity and (3) develop a mechanistic understanding of the genetic factors underlying inflorescence and grain development including assessment of temperature-sensitive processes improvement of which will be vital to cope with projected climate change in the UK as indicated in the strategic case.

Planned Impact

unavailable
 
Description Genome Editing debate Switzerland
Geographic Reach Europe 
Policy Influence Type Contribution to a national consultation/review
Impact Provide UK example of how we are regulating precision bred organisms
 
Description Grant Writing workshop
Geographic Reach National 
Policy Influence Type Influenced training of practitioners or researchers
Impact Grant writing
 
Description A novel transcriptional pathway that control axillary meristem induction in grasses
Amount £156,513 (GBP)
Funding ID BB/X00127X/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 04/2023 
End 05/2026
 
Description Leveraging genetic innovations for accelerated breeding of climate resilient and nutritious crops
Amount £1,300,000 (GBP)
Organisation Foreign Commonwealth and Development Office (FCDO) 
Sector Public
Country United Kingdom
Start 01/2024 
End 12/2026
 
Description 10 Pangenome Project 
Organisation University of Saskatchewan
Country Canada 
Sector Academic/University 
PI Contribution Collaboration for 10 pangenome project
Collaborator Contribution Collaboration for 10 pangenome project
Impact Sequencing of 10 wheat varieties
Start Year 2017
 
Description Bayer 
Organisation Bayer
Department Bayer CropScience Ltd
Country United Kingdom 
Sector Private 
PI Contribution Wheat genetics and genomics
Collaborator Contribution Wheat breeding and molecular knowledge
Impact joint projects
Start Year 2012
 
Description Bayer 
Organisation Bayer
Department Bayer CropScience Ltd
Country United Kingdom 
Sector Private 
PI Contribution Wheat genetics and genomics
Collaborator Contribution Wheat breeding and molecular knowledge
Impact joint projects
Start Year 2012
 
Description CGIAR 
Organisation International Center for Agricultural Research in the Dry Areas
Country Syrian Arab Republic 
Sector Charity/Non Profit 
PI Contribution Provide molecular markers for yellow rust and blast resistance genes; provide germplasm with improved traits.
Collaborator Contribution provide field phenotyping and delivery into wheat cultivars
Impact n/a
Start Year 2013
 
Description CGIAR 
Organisation International Centre for Maize and Wheat Improvement (CIMMYT)
Country Mexico 
Sector Charity/Non Profit 
PI Contribution Provide molecular markers for yellow rust and blast resistance genes; provide germplasm with improved traits.
Collaborator Contribution provide field phenotyping and delivery into wheat cultivars
Impact n/a
Start Year 2013
 
Description Collaboration with University of Birmingham 
Organisation University of Birmingham
Country United Kingdom 
Sector Academic/University 
PI Contribution Epigenetic and phenotypic characterization in wheat.
Collaborator Contribution Expertise in epigenetics.
Impact Work is still in progress so no outputs yet.
Start Year 2019
 
Description EIAR 
Organisation Ethiopian Institute of Agricultural Research
Country Ethiopia 
Sector Academic/University 
PI Contribution We are currently sequencing 200 teff genomes
Collaborator Contribution They have provided access to germplasm and DNA
Impact none so far
Start Year 2020
 
Description KWS 
Organisation KWS UK
Country United Kingdom 
Sector Private 
PI Contribution Genetics and genomics
Collaborator Contribution Breeder know how and germplasm
Impact joint projects
Start Year 2009
 
Description RAGT 
Organisation RAGT Seeds
Country United Kingdom 
Sector Private 
PI Contribution Genetics and genomics
Collaborator Contribution Wheat germplasm and know how
Impact Shared projects
Start Year 2009
 
Description Syngenta 
Organisation Syngenta International AG
Country Switzerland 
Sector Private 
PI Contribution Have shared germplasm for use in their breeding programmes.
Collaborator Contribution Have taken up JIC IP to use in their breeding operations.
Impact This has just started.
Start Year 2017
 
Description Teff genomics 
Organisation Aberystwyth University
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Teff genomics 
Organisation International Livestock Research Institute (ILRI)
Country Kenya 
Sector Charity/Non Profit 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Teff genomics 
Organisation King Abdullah University of Science and Technology (KAUST)
Country Saudi Arabia 
Sector Academic/University 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Teff genomics 
Organisation Sant'Anna School of Advanced Studies
Country Italy 
Sector Academic/University 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Teff genomics 
Organisation University of Cambridge
Department Department of Plant Sciences
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Teff genomics 
Organisation University of Edinburgh
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaboration on teff genomics
Collaborator Contribution Provided germplasm and genome sequences
Impact teff community workshop in March 2024
Start Year 2022
 
Description Tillering 
Organisation University of Warwick
Country United Kingdom 
Sector Academic/University 
PI Contribution knowledge on wheat genomics and genetics
Collaborator Contribution germplasm for branching
Impact Field trials and manuscript in preparation
Start Year 2022
 
Description VIB_Ghent 
Organisation Vlaams Instituut voor Biotechnologie
Department VIB Gent
Country Belgium 
Sector Charity/Non Profit 
PI Contribution We are working to annotate the cis-regulatory landscape of polyploid wheat
Collaborator Contribution They have run BLSSpeller on multiple Poacaea genomes
Impact none so far
Start Year 2020
 
Description At the forefront of plant research 2023 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Seminar at At the forefront of plant research 2023
Year(s) Of Engagement Activity 2023
 
Description Discissions Erik Van Der Biezen, BASF 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Discussions with Erik Van Der Biezen, BASF
Year(s) Of Engagement Activity 2023
 
Description Interview SRF Genome Editing 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Interview for main news report by major Swiss TV SRF. Discussion on genome editing and opportunities
Year(s) Of Engagement Activity 2023
URL https://www.srf.ch/play/tv/10-vor-10/video/regulierung-von-gentechnikverfahren-bei-pflanzen?urn=urn:...
 
Description New Plant Breeding Technologies opportunities and challenges with RAGT global wheat breeders 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact New Plant Breeding Technologies opportunities and challenges with RAGT global wheat breeders
Year(s) Of Engagement Activity 2024
 
Description Outreach activity - Science in the park 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Science in the park activity was organised at Wollaton Hall, Nottingham and it focused on showcasing hidden half "root system" of the plant. More than 100 people including researchers, adults, children and students attended the event. Our team members showcased how roots grow in soil using soil rhizotrons and used two contrasting genotypes to show differences in root growth angles.
Year(s) Of Engagement Activity 2024
URL https://wollatonhall.org.uk/science-in-the-park/
 
Description Presentation and Discussion with Oxford Centre for Islamic Studies 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Presentation and Discussion with Oxford Centre for Islamic Studies
Year(s) Of Engagement Activity 2024
 
Description Royal Society Brian Cox School Experiments YouTube Videos 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Schools
Results and Impact I participated in filming an educational video as part of the Royal Society School experiments videos. The film's topic was Gene Editing for Improved Crop Nutrition. The video was presented by Brian Cox. The video is aimed for educational purposes for school children aged 11-14 and can be used by teachers.
Year(s) Of Engagement Activity 2023,2024
URL https://youtu.be/wfghDz2jm9A?si=X9Z6qhQOaeTE8vHP
 
Description Training Workshop on Wheat Genetics and Genomics in Kazakhstan 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Training Workshop on Wheat Genetics and Genomics in Kazakhstan
Year(s) Of Engagement Activity 2023
 
Description Translational Research in Crops 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Invited talk Translational Research in Crops
Year(s) Of Engagement Activity 2023
 
Description Women in Wheat training 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Training for Women in Wheat
Year(s) Of Engagement Activity 2023