Delivering Sustainable Wheat: Targeted Sustainability-Trait Discovery (John Innes Centre)
Lead Research Organisation:
John Innes Centre
Department Name: UNLISTED
Abstract
Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.
Technical Summary
WP1 addresses resource capture and utilisation efficiency to achieve sustainable wheat yield quality and stability. Increasing production costs (e.g. fertilizers) and a need to decrease the carbon footprint of farming demand improvements in efficiency. This includes addressing changes in farming practices such as the rise of reduced till or regenerative agriculture due to the major impact these have on soil structure13. A focus of WP1 is to enhance root and canopy carbon sequestration and improve N P minerals (such as Zn) and water use efficiency. However as yield remains a key commercial target and is essential for global food security aspects of yield components trait tradeoffs and challenges arising from climate change are addressed14. WP1 will study root canopy inflorescence and grain development using physiology genetics hormone profiling metabolite analyses and genomics to reveal haplotypes associated with these key sustainability traits the integration of these processes and the impacts on plant development in fluctuating environments.
WP1 will (1) dissect G x E x M interactions for nutrient acquisition water and light use efficiency and carbon capture and develop/identify germplasm able to exploit reduced inputs and no-till farming (2) deliver increase yield yield stability and efficiency gains via the Breeders Toolkit (BTK) improving or understanding of the physiological and molecular basis of these key components of productivity and (3) develop a mechanistic understanding of the genetic factors underlying inflorescence and grain development including assessment of temperature-sensitive processes improvement of which will be vital to cope with projected climate change in the UK as indicated in the strategic case.
WP1 will (1) dissect G x E x M interactions for nutrient acquisition water and light use efficiency and carbon capture and develop/identify germplasm able to exploit reduced inputs and no-till farming (2) deliver increase yield yield stability and efficiency gains via the Breeders Toolkit (BTK) improving or understanding of the physiological and molecular basis of these key components of productivity and (3) develop a mechanistic understanding of the genetic factors underlying inflorescence and grain development including assessment of temperature-sensitive processes improvement of which will be vital to cope with projected climate change in the UK as indicated in the strategic case.
Planned Impact
unavailable
Organisations
- John Innes Centre (Lead Research Organisation)
- RAGT Seeds (Collaboration)
- International Livestock Research Institute (ILRI) (Collaboration)
- ABERYSTWYTH UNIVERSITY (Collaboration)
- University of Warwick (Collaboration)
- International Centre for Maize and Wheat Improvement (CIMMYT) (Collaboration)
- UNIVERSITY OF CAMBRIDGE (Collaboration)
- International Center for Agricultural Research in the Dry Areas (Collaboration)
- ETHIOPIAN INSTITUTE OF AGRICULTURAL RESEARCH (Collaboration)
- Vlaams Instituut voor Biotechnologie (Collaboration)
- UNIVERSITY OF EDINBURGH (Collaboration)
- Bayer (Collaboration)
- Syngenta International AG (Collaboration)
- KWS UK (Collaboration)
- University of Saskatchewan (Collaboration)
- UNIVERSITY OF BIRMINGHAM (Collaboration)
- Sant'Anna School of Advanced Studies (Collaboration)
- King Abdullah University of Science and Technology (KAUST) (Collaboration)
Publications
Ahmed H
(2023)
Einkorn genomics sheds light on history of the oldest domesticated wheat
in Nature
Backhaus AE
(2023)
Delayed development of basal spikelets in wheat explains their increased floret abortion and rudimentary nature.
in Journal of experimental botany
Boden SA
(2023)
Updated guidelines for gene nomenclature in wheat.
in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Cavalet-Giorsa E
(2023)
Origin and evolution of the bread wheat D genome
Harrington S
(2023)
A two-gene strategy increases iron and zinc concentrations in wheat flour, improving mineral bioaccessibility
in Plant Physiology
Horsnell R
(2024)
A wheat chromosome segment substitution line series supports characterization and use of progenitor genetic variation.
in The plant genome
Description | Genome Editing debate Switzerland |
Geographic Reach | Europe |
Policy Influence Type | Contribution to a national consultation/review |
Impact | Provide UK example of how we are regulating precision bred organisms |
Description | Grant Writing workshop |
Geographic Reach | National |
Policy Influence Type | Influenced training of practitioners or researchers |
Impact | Grant writing |
Description | A novel transcriptional pathway that control axillary meristem induction in grasses |
Amount | £156,513 (GBP) |
Funding ID | BB/X00127X/1 |
Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
Sector | Public |
Country | United Kingdom |
Start | 04/2023 |
End | 05/2026 |
Description | Leveraging genetic innovations for accelerated breeding of climate resilient and nutritious crops |
Amount | £1,300,000 (GBP) |
Organisation | Foreign Commonwealth and Development Office (FCDO) |
Sector | Public |
Country | United Kingdom |
Start | 01/2024 |
End | 12/2026 |
Description | 10 Pangenome Project |
Organisation | University of Saskatchewan |
Country | Canada |
Sector | Academic/University |
PI Contribution | Collaboration for 10 pangenome project |
Collaborator Contribution | Collaboration for 10 pangenome project |
Impact | Sequencing of 10 wheat varieties |
Start Year | 2017 |
Description | Bayer |
Organisation | Bayer |
Department | Bayer CropScience Ltd |
Country | United Kingdom |
Sector | Private |
PI Contribution | Wheat genetics and genomics |
Collaborator Contribution | Wheat breeding and molecular knowledge |
Impact | joint projects |
Start Year | 2012 |
Description | Bayer |
Organisation | Bayer |
Department | Bayer CropScience Ltd |
Country | United Kingdom |
Sector | Private |
PI Contribution | Wheat genetics and genomics |
Collaborator Contribution | Wheat breeding and molecular knowledge |
Impact | joint projects |
Start Year | 2012 |
Description | CGIAR |
Organisation | International Center for Agricultural Research in the Dry Areas |
Country | Syrian Arab Republic |
Sector | Charity/Non Profit |
PI Contribution | Provide molecular markers for yellow rust and blast resistance genes; provide germplasm with improved traits. |
Collaborator Contribution | provide field phenotyping and delivery into wheat cultivars |
Impact | n/a |
Start Year | 2013 |
Description | CGIAR |
Organisation | International Centre for Maize and Wheat Improvement (CIMMYT) |
Country | Mexico |
Sector | Charity/Non Profit |
PI Contribution | Provide molecular markers for yellow rust and blast resistance genes; provide germplasm with improved traits. |
Collaborator Contribution | provide field phenotyping and delivery into wheat cultivars |
Impact | n/a |
Start Year | 2013 |
Description | Collaboration with University of Birmingham |
Organisation | University of Birmingham |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Epigenetic and phenotypic characterization in wheat. |
Collaborator Contribution | Expertise in epigenetics. |
Impact | Work is still in progress so no outputs yet. |
Start Year | 2019 |
Description | EIAR |
Organisation | Ethiopian Institute of Agricultural Research |
Country | Ethiopia |
Sector | Academic/University |
PI Contribution | We are currently sequencing 200 teff genomes |
Collaborator Contribution | They have provided access to germplasm and DNA |
Impact | none so far |
Start Year | 2020 |
Description | KWS |
Organisation | KWS UK |
Country | United Kingdom |
Sector | Private |
PI Contribution | Genetics and genomics |
Collaborator Contribution | Breeder know how and germplasm |
Impact | joint projects |
Start Year | 2009 |
Description | RAGT |
Organisation | RAGT Seeds |
Country | United Kingdom |
Sector | Private |
PI Contribution | Genetics and genomics |
Collaborator Contribution | Wheat germplasm and know how |
Impact | Shared projects |
Start Year | 2009 |
Description | Syngenta |
Organisation | Syngenta International AG |
Country | Switzerland |
Sector | Private |
PI Contribution | Have shared germplasm for use in their breeding programmes. |
Collaborator Contribution | Have taken up JIC IP to use in their breeding operations. |
Impact | This has just started. |
Start Year | 2017 |
Description | Teff genomics |
Organisation | Aberystwyth University |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Teff genomics |
Organisation | International Livestock Research Institute (ILRI) |
Country | Kenya |
Sector | Charity/Non Profit |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Teff genomics |
Organisation | King Abdullah University of Science and Technology (KAUST) |
Country | Saudi Arabia |
Sector | Academic/University |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Teff genomics |
Organisation | Sant'Anna School of Advanced Studies |
Country | Italy |
Sector | Academic/University |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Teff genomics |
Organisation | University of Cambridge |
Department | Department of Plant Sciences |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Teff genomics |
Organisation | University of Edinburgh |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Collaboration on teff genomics |
Collaborator Contribution | Provided germplasm and genome sequences |
Impact | teff community workshop in March 2024 |
Start Year | 2022 |
Description | Tillering |
Organisation | University of Warwick |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | knowledge on wheat genomics and genetics |
Collaborator Contribution | germplasm for branching |
Impact | Field trials and manuscript in preparation |
Start Year | 2022 |
Description | VIB_Ghent |
Organisation | Vlaams Instituut voor Biotechnologie |
Department | VIB Gent |
Country | Belgium |
Sector | Charity/Non Profit |
PI Contribution | We are working to annotate the cis-regulatory landscape of polyploid wheat |
Collaborator Contribution | They have run BLSSpeller on multiple Poacaea genomes |
Impact | none so far |
Start Year | 2020 |
Description | At the forefront of plant research 2023 |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Seminar at At the forefront of plant research 2023 |
Year(s) Of Engagement Activity | 2023 |
Description | Discissions Erik Van Der Biezen, BASF |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | Discussions with Erik Van Der Biezen, BASF |
Year(s) Of Engagement Activity | 2023 |
Description | Interview SRF Genome Editing |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Public/other audiences |
Results and Impact | Interview for main news report by major Swiss TV SRF. Discussion on genome editing and opportunities |
Year(s) Of Engagement Activity | 2023 |
URL | https://www.srf.ch/play/tv/10-vor-10/video/regulierung-von-gentechnikverfahren-bei-pflanzen?urn=urn:... |
Description | New Plant Breeding Technologies opportunities and challenges with RAGT global wheat breeders |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Industry/Business |
Results and Impact | New Plant Breeding Technologies opportunities and challenges with RAGT global wheat breeders |
Year(s) Of Engagement Activity | 2024 |
Description | Outreach activity - Science in the park |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | Regional |
Primary Audience | Public/other audiences |
Results and Impact | Science in the park activity was organised at Wollaton Hall, Nottingham and it focused on showcasing hidden half "root system" of the plant. More than 100 people including researchers, adults, children and students attended the event. Our team members showcased how roots grow in soil using soil rhizotrons and used two contrasting genotypes to show differences in root growth angles. |
Year(s) Of Engagement Activity | 2024 |
URL | https://wollatonhall.org.uk/science-in-the-park/ |
Description | Presentation and Discussion with Oxford Centre for Islamic Studies |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Presentation and Discussion with Oxford Centre for Islamic Studies |
Year(s) Of Engagement Activity | 2024 |
Description | Royal Society Brian Cox School Experiments YouTube Videos |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Schools |
Results and Impact | I participated in filming an educational video as part of the Royal Society School experiments videos. The film's topic was Gene Editing for Improved Crop Nutrition. The video was presented by Brian Cox. The video is aimed for educational purposes for school children aged 11-14 and can be used by teachers. |
Year(s) Of Engagement Activity | 2023,2024 |
URL | https://youtu.be/wfghDz2jm9A?si=X9Z6qhQOaeTE8vHP |
Description | Training Workshop on Wheat Genetics and Genomics in Kazakhstan |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Other audiences |
Results and Impact | Training Workshop on Wheat Genetics and Genomics in Kazakhstan |
Year(s) Of Engagement Activity | 2023 |
Description | Translational Research in Crops |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Invited talk Translational Research in Crops |
Year(s) Of Engagement Activity | 2023 |
Description | Women in Wheat training |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Postgraduate students |
Results and Impact | Training for Women in Wheat |
Year(s) Of Engagement Activity | 2023 |