Intelligent and Personalised Risk Stratification and Early Diagnosis of Lung Cancer
Lead Research Organisation:
King's College London
Department Name: Imaging & Biomedical Engineering
Abstract
Lung cancer is the second most common cancer in both males and females, and has a very poor prognosis, causing >35,000 of cancer-related deaths each year (nearly 100 every day). This is due to the mostly very late-stage diagnosis of cancer: nearly 50% of all lung cancer cases are only diagnosed at very late Stage IV where no curative treatment exists. The annual cost of lung cancer to the UK economy is estimated to be around £2.4 billion, taking into account the cost of treatment and premature death, the cost to business of sick leave and of unpaid care by friends and family. It eclipses the cost of any other cancer, and continues to present a significant economic and healthcare burden. There is currently no national lung cancer screening programme in the UK, as current tests are deemed to be inadequate, and not outweighing risks associated with screening that involves radiation exposure.
The vision for our Healthcare Impact Partnership is to pave the way for a fundamentally different approach in which lung cancer can be detected at an early stage in patients identified as being at high risk of developing lung cancer: In a close three-way partnership between clinicians specialising in lung disease, healthcare industry, and computational imaging/machine learning researchers, we will jointly develop, test and clinically evaluate new computational methods for detecting, classifying and monitoring lung nodules in low-dose longitudinal CT of patients identified of being at risk of developing lung cancer. Specifically, we will embed powerful machine learning methods within a lung registration framework that has been previous developed using EPSRC funding. Through the use of deep feature learning techniques as well as through learning complex respiratory motion patterns, we will explore transfer learning from large, annotated lung CT image databases to a high-risk patient cohort receiving low-dose CT imaging.
Through this partnership, which brings together expertise in computational imaging and deep learning, expert clinicians and a leading CT manufacturer, we aim to achieve both computational innovations in personalised diagnostics, as well as a strong translational focus for improved patient management, effectively leading the way in providing advanced healthcare technologies for a future UK lung cancer screening programme.
The vision for our Healthcare Impact Partnership is to pave the way for a fundamentally different approach in which lung cancer can be detected at an early stage in patients identified as being at high risk of developing lung cancer: In a close three-way partnership between clinicians specialising in lung disease, healthcare industry, and computational imaging/machine learning researchers, we will jointly develop, test and clinically evaluate new computational methods for detecting, classifying and monitoring lung nodules in low-dose longitudinal CT of patients identified of being at risk of developing lung cancer. Specifically, we will embed powerful machine learning methods within a lung registration framework that has been previous developed using EPSRC funding. Through the use of deep feature learning techniques as well as through learning complex respiratory motion patterns, we will explore transfer learning from large, annotated lung CT image databases to a high-risk patient cohort receiving low-dose CT imaging.
Through this partnership, which brings together expertise in computational imaging and deep learning, expert clinicians and a leading CT manufacturer, we aim to achieve both computational innovations in personalised diagnostics, as well as a strong translational focus for improved patient management, effectively leading the way in providing advanced healthcare technologies for a future UK lung cancer screening programme.
Planned Impact
Lung cancer is the second most common cancer in men and women in the UK, with >45,000 new diagnoses each year and a high morbidity (5-year survival is 10%, with 100 deaths per day). 50% of all cases are diagnosis only at late stage IV, when curative treatment is no longer possible. The annual cost of lung cancer to the UK economy is estimated to be around £2.4 billion, taking into account the cost of treatment and premature death, the cost to business of sick leave and of unpaid care by friends and family. It eclipses the cost of any other cancer, with each lung cancer patient costing the UK healthcare system alone over £9k p.a. Lung cancer therefore continues to present a significant economic and healthcare burden. There is currently no national lung cancer screening programme in the UK, as current tests are deemed to be inadequate, and not outweighing risks associated with screening that involves radiation exposure (Source: CRUK).
This Healthcare Impact Partnership will form a close partnership with clinicians and a leading computed tomography (CT) manufacturer, as well as scientists in computational imaging and machine learning, to develop and clinically evaluate new computational approaches for early detection of lung cancer, to improve patient management, reduce morbidity and reduce healthcare costs. Our goal of designing an intelligent computational tool for personalised risk stratification for patients identified as being at risk of developing lung cancer will pave the way for a future UK national lung cancer screening programme.
The main beneficiaries are patients with chronic obstructive pulmonary disease (COPD), who may be identified as high-risk patients due to smoking habits or other factors. These patients will benefit from early diagnosis of cancer, where it may still be treatable, and would be at least trebling their survival rate, and improve their quality of life and patient experience. Beneficiaries also include their families or carers, as well as their employers and through that the UK economy. Healthcare savings would potentially be substantial, e.g. by reducing major surgeries to minor interventions, which would be of benefit to healthcare providers.
Clinicians (radiologists, oncologists, physicians) would also benefit from the proposed research, being assisted by an intelligent tool for early clinical diagnosis, reducing the conventional radiological reading and providing automated, objective and predictive measures. The risk stratification would further aid in clinical decision making for optimal treatment selection, patient recall or referrals. Early diagnosis of lung cancer would widen the currently very small window of opportunity of developing effective cancer treatments, which would also be of benefit to pharmaceutical industries.
Healthcare industry, represented by a market leader in medical imaging in this Healthcare Impact Partnership, are also a beneficiary of the proposed research, as they would significantly benefit from advanced diagnostics tools that provide meaningful clinical information to the end user, aiding their product development and marketing.
Finally, other researchers would benefit from translating ideas generated by this research to other clinical applications in cancer, cardiology or neurology, where patient risk stratification is required. Through that, the societal and healthcare benefit would further increase as a wider range of patients would received optimised treatment based on more accurate and early diagnosis.
This Healthcare Impact Partnership will form a close partnership with clinicians and a leading computed tomography (CT) manufacturer, as well as scientists in computational imaging and machine learning, to develop and clinically evaluate new computational approaches for early detection of lung cancer, to improve patient management, reduce morbidity and reduce healthcare costs. Our goal of designing an intelligent computational tool for personalised risk stratification for patients identified as being at risk of developing lung cancer will pave the way for a future UK national lung cancer screening programme.
The main beneficiaries are patients with chronic obstructive pulmonary disease (COPD), who may be identified as high-risk patients due to smoking habits or other factors. These patients will benefit from early diagnosis of cancer, where it may still be treatable, and would be at least trebling their survival rate, and improve their quality of life and patient experience. Beneficiaries also include their families or carers, as well as their employers and through that the UK economy. Healthcare savings would potentially be substantial, e.g. by reducing major surgeries to minor interventions, which would be of benefit to healthcare providers.
Clinicians (radiologists, oncologists, physicians) would also benefit from the proposed research, being assisted by an intelligent tool for early clinical diagnosis, reducing the conventional radiological reading and providing automated, objective and predictive measures. The risk stratification would further aid in clinical decision making for optimal treatment selection, patient recall or referrals. Early diagnosis of lung cancer would widen the currently very small window of opportunity of developing effective cancer treatments, which would also be of benefit to pharmaceutical industries.
Healthcare industry, represented by a market leader in medical imaging in this Healthcare Impact Partnership, are also a beneficiary of the proposed research, as they would significantly benefit from advanced diagnostics tools that provide meaningful clinical information to the end user, aiding their product development and marketing.
Finally, other researchers would benefit from translating ideas generated by this research to other clinical applications in cancer, cardiology or neurology, where patient risk stratification is required. Through that, the societal and healthcare benefit would further increase as a wider range of patients would received optimised treatment based on more accurate and early diagnosis.
Publications
Ellis S
(2022)
Evaluation of 3D GANs for Lung Tissue Modelling in Pulmonary CT
in Machine Learning in Biomedical Imaging
Grzech D
(2021)
Uncertainty quantification in non-rigid image registration via stochastic gradient Markov chain Monte Carlo
in Machine Learning for Biomedical Imaging
Kamnitsas K.
(2018)
Semi-supervised learning via compact latent space clustering
in 35th International Conference on Machine Learning, ICML 2018
Description | This award pushed forward research in early-stage lung cancer detection using imaging, by: - simulating healthy lung patches from diseased lung tissues, to create synthetic healthy-diseased pairs or series of images for the same patient - simulating early-stage tumours, to augment machine learning methods and thus enhance their potential to detect or classify early-stage lesions - investigating the effect of different data distributions on classifying benign and malignant lung tumours of different sizes, highlighting training and testing issues in machine learning methods |
Exploitation Route | A CRUK early lung cancer/recurrence grant was obtained where findings will be further applied and developed. |
Sectors | Communities and Social Services/Policy Digital/Communication/Information Technologies (including Software) Healthcare Pharmaceuticals and Medical Biotechnology |
Description | AI expert hour - German Bundestag |
Geographic Reach | National |
Policy Influence Type | Participation in a guidance/advisory committee |
URL | https://www.helmholtz-munich.de/newsroom/news/artikel/first-expert-hour-at-the-german-bundestag-data... |
Description | European Commission Expert Group on Liability and New Technologies |
Geographic Reach | Europe |
Policy Influence Type | Contribution to a national consultation/review |
Impact | The expert consultation has directly influenced the report of the working group on liability of new technologies in healthcare. |
URL | https://ec.europa.eu/transparency/regexpert/index.cfm?do=groupDetail.groupDetail&groupID=3592&news=1 |
Description | German National Cohort (NaKo) AI Expert Group |
Geographic Reach | National |
Policy Influence Type | Participation in a guidance/advisory committee |
URL | https://nako.de/informationen-auf-englisch/ |
Description | EPSRC Centre for Doctoral Training in Smart Medical Imaging at King's College London and Imperial College London |
Amount | £6,022,394 (GBP) |
Funding ID | EP/S022104/1 |
Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
Sector | Public |
Country | United Kingdom |
Start | 08/2019 |
End | 03/2028 |
Description | Improving the early detection of lung cancer by combining exosomal analysis of hypoxia with standard of care imaging |
Amount | £531,701 (GBP) |
Organisation | Cancer Research UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 03/2019 |
End | 03/2023 |
Description | London Medical Imaging & Artificial Intelligence Centre for Value-Based Healthcare |
Amount | £9,985,272 (GBP) |
Funding ID | 104691 |
Organisation | Innovate UK |
Sector | Public |
Country | United Kingdom |
Start | 02/2019 |
End | 01/2022 |
Description | Collaboration with Guy's and St. Thomas NHS Trust |
Organisation | Guy's and St Thomas' NHS Foundation Trust |
Country | United Kingdom |
Sector | Public |
PI Contribution | PhD project |
Collaborator Contribution | data sharing agreement |
Impact | PhD thesis in write-up |
Start Year | 2017 |
Description | Collaboration with Prof Kensaku Mori, Nagoya University |
Organisation | Nagoya University |
Country | Japan |
Sector | Academic/University |
PI Contribution | We have hosted Prof Kensaku Mori and his PhD student, Hirohisa Oda, several times in our labs. |
Collaborator Contribution | Prof Mori is paying frequent lab visits, resulting in joint publications |
Impact | Publications as associated with grant |
Start Year | 2017 |
Description | Collaboration with Royal Brompton Hospital |
Organisation | Royal Brompton & Harefield NHS Foundation Trust |
Country | United Kingdom |
Sector | Public |
PI Contribution | We have engaged with regular joined project meetings, exchanging new research ideas. |
Collaborator Contribution | Dr Anant Devaraj from RBH has joined this project team, contributing with additional annotated lung CT data |
Impact | n/a |
Start Year | 2018 |
Description | Collaboration with Siemens Healthineers |
Organisation | Siemens Healthcare |
Department | Siemens Healthcare Ltd |
Country | United Kingdom |
Sector | Private |
PI Contribution | Joint project update meetings/reports. |
Collaborator Contribution | Siemens Healthineers have been co-funding the PhD student, Vasileios Baltatzis, on this grant. |
Impact | PhD thesis in write-up |
Start Year | 2017 |
Description | Collaboration with University College Hospital (2018 - Still Active) |
Organisation | University College Hospital |
Country | United Kingdom |
Sector | Hospitals |
PI Contribution | See next point. |
Collaborator Contribution | Dr Arjun Nair, originally based at Guy's and St. Thomas' Trusts (GSTT), has taken on a new appointment at UCLH. As the lead of the lung cancer pathway of the GSTT TOHETI study (Transforming Healthcare Through imaging), Dr Nair as one of our key clinical collaborators continues to provide direct clinical input and expertise into this project. |
Impact | Ongoing |
Start Year | 2018 |
Description | BIR/RCR Meeting: AI in Radiology in 2020 |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Invited talk at the BIR/RCR Annual Meeting on AI in radiology |
Year(s) Of Engagement Activity | 2020 |
URL | https://www.mybir.org.uk/CPBase__event_detail?id=a173Y00000CwkXhQAJ&site=a0N2000000COvFsEAL |
Description | CRUK/EPSRC Early Detection Sandpit - 7 January 2019, Oxford |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Invited panel talk & discussion on "AI for Early Detection" - Prof Julia Schnabel |
Year(s) Of Engagement Activity | 2019 |
Description | Case CCC Artificial Intelligence in Oncology Symposium |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Postgraduate students |
Results and Impact | Invited keynote on "AI for Cancer Imaging" |
Year(s) Of Engagement Activity | 2021 |
URL | https://case.edu/cancer/events/artificial-intelligence-oncology/aio-agenda |
Description | Developments in Healthcare Imaging - Connecting with Academia |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | As part of the MedIAN network, we organised a session on Deep Learning in Medical Imaging with selected invited talks from early career researchers and an introduction the network. |
Year(s) Of Engagement Activity | 2018 |
URL | https://gateway.newton.ac.uk/event/tgmw58/programme |
Description | Developments in Healthcare Imaging - Connecting with Industry |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Industry/Business |
Results and Impact | Presented the MedIAN network and invited participants to join the community. |
Year(s) Of Engagement Activity | 2017 |
URL | http://www.turing-gateway.cam.ac.uk/event/tgmw48/programme |
Description | ESR Connect |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Live-streamed show on AI in radiology |
Year(s) Of Engagement Activity | 2020 |
URL | https://connect.myesr.org/course/use-cases-in-ai-reasons-to-do-ai-with-friends/ |
Description | East Anglian Radiological Society Annual Meeting (EARS) |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Talk "Hopes and Hurdles for AI in Radiology" |
Year(s) Of Engagement Activity | 2019 |
URL | https://radiology.medschl.cam.ac.uk/event/east-anglian-radiological-society-annual-meeting-ears-2019... |
Description | European Commission Expert Group on Liability and New Technologies |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Policymakers/politicians |
Results and Impact | Provide the European Commission with expertise on the applicability of the Product Liability Directive to traditional products, new technologies and new societal challenges (Product Liability Directive formation) and assist the Commission in developing principles that can serve as guidelines for possible adaptations of applicable laws at EU and national level relating to new technologies (New Technologies formation). |
Year(s) Of Engagement Activity | 2018 |
URL | http://ec.europa.eu/transparency/regexpert/index.cfm?do=groupDetail.groupMeeting&meetingId=9390 |
Description | Horizon Europe: New Parliament, new Commission, new agenda |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Policymakers/politicians |
Results and Impact | Panel discussion: Value-based healthcare: How technologies can improve care across the EU |
Year(s) Of Engagement Activity | 2019 |
URL | https://sciencebusiness.net/events/horizon-europe-new-parliament-new-commission-new-agenda |
Description | Imperial Global Science Policy Forum |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Policymakers/politicians |
Results and Impact | The Imperial Global Science Policy Forum is a high-profile network connecting Imperial academics with senior international science and technology advisers and diplomats, UK government policymakers, industry experts and other relevant stakeholders. |
Year(s) Of Engagement Activity | 2018 |
URL | https://www.imperial.ac.uk/news/188848/diplomats-industry-leaders-discuss-future-ai/ |
Description | Machine Learning for Translational Medicine & Personalized Healthcare |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Professional Practitioners |
Results and Impact | Talk "Spot-the-Lesion: Image- based disease detection with deep learning" |
Year(s) Of Engagement Activity | 2019 |
URL | https://www.eventbrite.com/e/imperial-college-itmat-dsg-workshop-2019-data-science-challenges-and-op... |
Description | Medical Imaging Summer School (MISS 2018): Medical Imaging meets Deep Learning - Director Prof Julia Schnabel |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Postgraduate students |
Results and Impact | The focus of this Medical Imaging Summer School (MISS) is to train a new generation of young scientists to bridge this gap, by providing insights into the various interfaces between medical imaging and deep learning, based on the shared broad categories of medical image computing, computer-aided image interpretation and disease classification. The course will contain a combination of in-depth tutorial-style lectures on fundamental state-of-the-art concepts, followed by accessible yet advanced research lectures using examples and applications. A broad overview of the field will be given, and guided reading groups will complement lectures. The course will be delivered by world renowned experts from both academia and industry, who are working closely at the interface of medical imaging/deep learning. The school aims to provide a stimulating graduate training opportunity for young researchers and Ph.D. students. The participants will benefit from direct interaction with world leaders in medical image computing and deep learning(often working in both fields). Participants will also have the opportunity to present their own research, and to interact with their scientific peers, in a friendly and constructive setting. |
Year(s) Of Engagement Activity | 2018 |
URL | http://iplab.dmi.unict.it/miss18/ |