Functional characterisation of the major susceptibility locus (PSORS1) for cutaneous inflammation in psoriasis
Lead Research Organisation:
King's College London
Department Name: Genetics and Molecular Medicine
Abstract
Skin presents an essential barrier to environmental triggers capable of preventing challenge to the bodies natural defence mechanisms which includes a sophisticated immune surveillance network. Psoriasis, a life long skin disorder, is amongst a group of common conditions associated with chronic irritation and inflammation. Available evidence points to a fundamental defect in the capacity for barrier protection, dysregulation of the immune network or a combination of these through abnormal communication between skin and immune pathways. In order to develop new and effective therapies, a clear understanding of these processes and the fundamental defects that characterise the risk of developing psoriasis is now required. From a well defined region of the human genome, we have set out a series of studies designed to characterise the primary alterations that generate a very much increased risk disease development. Progress towards more effective ways to prevent or cure psoriasis would be expected to cut both in the short and long term, the heavy burden of chronic inflammation, and thus lead to a significant health and economic benefits compared to the present management of this disorder.
Technical Summary
Psoriasis, a disorder characterised by chronic cutaneous inflammation is amongst the most significant health care problems in dermatological practice. Our group has been instrumental in the identification and delineation of the location of the major genetic risk factor for disease susceptibility, known as PSORS1 and in describing the critical role of T lymphocytes in disease pathogenesis. In order to correctly target therapeutic strategies that form part of our translational research programme, we now need to precisely identify a) the primary molecular defect underlying PSORS1 conferred susceptibility and b) the cellular types, dysregulation of which are key to disease development. Epithelial (keratinocytes) and lymphoid effector cells are prime candidates, as both are known, from our work in human and model systems, to be critical to disease expression and progression. However, we now need to establish the primacy of these cell types on a more physiological basis in the context of our previous genetic studies. To accomplish this we have established the following set of objectives. (1) We will generate a detailed map of transcriptional activity and regulators, across the PSORS1 major susceptibility genomic interval (~250kb) and relate these findings to underlying genetic variation, (2) we will perform functional studies of the two principle biological candidate genes within this region, namely the Class 1 immune recognition molecule, HLA C and CDSN encoding the epithelial junctional protein, corneodesmosin and (3) we will validate our studies through targeted mutagenesis of the PSORS 1 interval in an established in vivo model system. Taken together, these studies will deliver fundamental insights as to the aetiology of common chronic cutaneous inflammation and define the relationship between epithelial and lymphoid dysregulation that leads to the development of psoriasis.
Organisations
- King's College London, United Kingdom (Lead Research Organisation)
- Hebrew University of Jerusalem (Collaboration)
- Karolinska Institute, Sweden (Collaboration)
- University of California, San Francisco, United States (Collaboration)
- Kiel University, Germany (Collaboration)
- GlaxoSmithKline (GSK) (Collaboration)
- Newcastle University, United Kingdom (Collaboration)
- University of Glasgow, United Kingdom (Collaboration)
- Fios Genomics (Collaboration)
- University of Michigan, United States (Collaboration)
- The Psoriasis Association (Collaboration)
- Queen Mary, University of London, United Kingdom (Collaboration)
- Dana-Farber Cancer Institute (Collaboration)
- Icosagen (Collaboration)
- Wellcome Trust, LONDON (Collaboration)
- University of Manchester, Manchester, United Kingdom (Collaboration)
- Heinrich Heine University Düsseldorf (Collaboration)
Publications


Berki DM
(2014)
Loss of IL36RN function does not confer susceptibility to psoriasis vulgaris.
in The Journal of investigative dermatology

Bijlmakers MJ
(2011)
Functional analysis of the RNF114 psoriasis susceptibility gene implicates innate immune responses to double-stranded RNA in disease pathogenesis.
in Human molecular genetics

Blumberg RS
(2012)
Unraveling the autoimmune translational research process layer by layer.
in Nature medicine

Capon F
(2012)
The quest for psoriasis susceptibility genes in the postgenome-wide association studies era: charting the road ahead.
in The British journal of dermatology

Capon F
(2012)
Psoriasis and other complex trait dermatoses: from Loci to functional pathways.
in The Journal of investigative dermatology

Capon F
(2008)
Identification of ZNF313/RNF114 as a novel psoriasis susceptibility gene.
in Human molecular genetics

Chu CC
(2012)
Resident CD141 (BDCA3)+ dendritic cells in human skin produce IL-10 and induce regulatory T cells that suppress skin inflammation.
in The Journal of experimental medicine

Chu CC
(2011)
Harnessing dendritic cells in inflammatory skin diseases.
in Seminars in immunology
Description | MRC Clinical Training Fellowship |
Amount | £199,657 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 06/2013 |
End | 07/2016 |
Description | MRC Clinical Training Fellowship |
Amount | £244,510 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 09/2008 |
End | 10/2011 |
Description | MRC Stratified Medicine award |
Amount | £2,500,000 (GBP) |
Funding ID | MR/L011808/1 |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 03/2014 |
End | 04/2018 |
Description | MRC clinical training fellowship |
Amount | £207,536 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 08/2010 |
End | 08/2013 |
Description | MRC clinical training fellowship |
Amount | £231,159 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 11/2007 |
End | 10/2010 |
Description | PhD studentships |
Amount | £81,000 (GBP) |
Funding ID | 3007s |
Organisation | British Skin Foundation |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 09/2011 |
End | 09/2014 |
Description | Psoriasis Association PhD studentship |
Amount | £75,000 (GBP) |
Organisation | The Psoriasis Association |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 09/2012 |
End | 10/2015 |
Title | BACS |
Description | generation of a series of BAC library which harbours using DNA derived from an individual heterozygous for the HLA-Cw0602 risk allele for psoriasis |
Type Of Material | Technology assay or reagent |
Provided To Others? | No |
Impact | Allowed detailed analysis of potential causal variants responsible for the susceptibility to psoriasis associated with this locus. |
Title | HLA-C promoter constructs |
Description | HLA-C allele specific reporter constructs |
Type Of Material | Technology assay or reagent |
Provided To Others? | No |
Impact | identification of a promoter variant mediating reduced responsiveness to TNF-a |
Title | bisulphite NGS |
Description | Design of MHC specific array for targeted bisulphite next generation sequencing (NGS) and optimisation of NGS techniques and analysis for application to this specific protocol |
Type Of Material | Technology assay or reagent |
Provided To Others? | No |
Impact | Successful application of this technique to the highly variable MHC region |
Title | immunochip |
Description | SNP array designed to include variants relevant to immunological disease including variants identified through this project to be potential causal variants in psoriasis |
Type Of Material | Technology assay or reagent |
Year Produced | 2010 |
Provided To Others? | Yes |
Impact | experimental work currently on going. |
Title | knockdown cell lines |
Description | Two Immortalized keratinocyte cell lines where a gene associated with pustular psoriasis has been knocked down by lentiviral shRNA transduction |
Type Of Material | Cell line |
Provided To Others? | No |
Impact | The characterization of the cellular phenotype will be included in a gene identification manuscript, which is currently in preparation. |
Description | GAIN psoriasis consortium |
Organisation | University of Kiel |
Country | Germany |
Sector | Academic/University |
PI Contribution | planning of experimental design and analyitcal development platforms |
Collaborator Contribution | sharing of data resourcessharing of data resources |
Impact | As a new collaboration this is yet to produce outcomes |
Start Year | 2010 |
Description | GAIN psoriasis consortium |
Organisation | University of Michigan |
Country | United States |
Sector | Academic/University |
PI Contribution | planning of experimental design and analyitcal development platforms |
Collaborator Contribution | sharing of data resourcessharing of data resources |
Impact | As a new collaboration this is yet to produce outcomes |
Start Year | 2010 |
Description | MAARS |
Organisation | Fios Genomics |
Country | United Kingdom |
Sector | Private |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | MAARS |
Organisation | Hebrew University of Jerusalem |
Country | Israel |
Sector | Academic/University |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | MAARS |
Organisation | Heinrich Heine University Düsseldorf |
Country | Germany |
Sector | Academic/University |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | MAARS |
Organisation | Icosagen |
Country | Estonia |
Sector | Private |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | MAARS |
Organisation | Karolinska Institute |
Country | Sweden |
Sector | Academic/University |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | MAARS |
Organisation | University of Kiel |
Country | Germany |
Sector | Academic/University |
PI Contribution | In-vivo and in-vitro functional assays |
Collaborator Contribution | Microbiome sequencing; transcriptomics |
Impact | 5.9 million euros funding from the EU to the MAARS Consortium, where King's College London is represented by Profs Barker and Nestle (both co-investigators in the MRC G0601387 grant) |
Start Year | 2011 |
Description | PSORT |
Organisation | GlaxoSmithKline (GSK) |
Country | Global |
Sector | Private |
PI Contribution | Genotyping and data analysis |
Collaborator Contribution | Patient recruitment and phenotyping; transcriptomic analysis. |
Impact | MRC Stratified Medicine grant |
Start Year | 2012 |
Description | PSORT |
Organisation | Newcastle University |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Genotyping and data analysis |
Collaborator Contribution | Patient recruitment and phenotyping; transcriptomic analysis. |
Impact | MRC Stratified Medicine grant |
Start Year | 2012 |
Description | PSORT |
Organisation | The Psoriasis Association |
Country | United Kingdom |
Sector | Charity/Non Profit |
PI Contribution | Genotyping and data analysis |
Collaborator Contribution | Patient recruitment and phenotyping; transcriptomic analysis. |
Impact | MRC Stratified Medicine grant |
Start Year | 2012 |
Description | PSORT |
Organisation | University of Glasgow |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Genotyping and data analysis |
Collaborator Contribution | Patient recruitment and phenotyping; transcriptomic analysis. |
Impact | MRC Stratified Medicine grant |
Start Year | 2012 |
Description | PSORT |
Organisation | University of Manchester |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Genotyping and data analysis |
Collaborator Contribution | Patient recruitment and phenotyping; transcriptomic analysis. |
Impact | MRC Stratified Medicine grant |
Start Year | 2012 |
Description | The impact of Histone deacetylation inhibition on inflammation |
Organisation | Dana-Farber Cancer Institute |
Country | United States |
Sector | Hospitals |
PI Contribution | testing HDACi in a mouse model of inflammation |
Collaborator Contribution | intellectual and experimental input |
Impact | replication of results underway |
Start Year | 2008 |
Description | UCSF |
Organisation | University of California, San Francisco |
Department | Department of Neurological Surgery |
Country | United States |
Sector | Academic/University |
PI Contribution | experimental work and design |
Collaborator Contribution | training in experimental and analysis techniques |
Impact | experimental work still under way. |
Start Year | 2011 |
Description | Van Heel |
Organisation | Queen Mary University of London |
Department | Centre for Statistics (QMUL) |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | DNA samples, data analysis |
Collaborator Contribution | Study design and data generation |
Impact | Article by Hunt et al, recently published on Nature |
Start Year | 2012 |
Description | WTCCC2 |
Organisation | Wellcome Trust |
Department | Wellcome Trust Case Control Consortium 2 |
Country | United Kingdom |
Sector | Charity/Non Profit |
PI Contribution | Samples, analysis, expertise |
Collaborator Contribution | Genotyping, analysis, expertise |
Impact | Joint publications Strange et al, Nat Genet. 2010 Nov;42(11):985-90. Epub 2010 Oct 17.PMID: 20953190 Tsoi et al, Nat Genet. 2012 Nov 11. doi: 10.1038/ng.2467. [Epub ahead of print] PMID: 23143594 |
Start Year | 2008 |
Description | psoriasis immunochip consortium |
Organisation | University of Kiel |
Country | Germany |
Sector | Academic/University |
PI Contribution | data and information sharing |
Collaborator Contribution | data and information sharingdata and information sharing |
Impact | identification of psoriasis relevant variants to include on the Immunochip |
Start Year | 2010 |
Description | psoriasis immunochip consortium |
Organisation | University of Michigan |
Country | United States |
Sector | Academic/University |
PI Contribution | data and information sharing |
Collaborator Contribution | data and information sharingdata and information sharing |
Impact | identification of psoriasis relevant variants to include on the Immunochip |
Start Year | 2010 |
Description | biomedical research forum |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Participants in your research and patient groups |
Results and Impact | NIHR Biomedical Research Centre - monthly open access presentation transmitted to 4 sites in London and internationally. increased awareness of aims of research |
Year(s) Of Engagement Activity | 2008,2009,2010,2011,2013 |
Description | cafe scientifique |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Public/other audiences |
Results and Impact | short presentation to members of the public at the Biomedical Research Centre cafe scientifique event at Guy's Hospital, London. Questions and discussions followed Positive feed back received |
Year(s) Of Engagement Activity | 2010 |