Will the ongoing use of a two-dose, rather than three-dose schedule of pneumococcal conjugate vaccine, have similar impact in rural Gambia?

Lead Research Organisation: MRC Unit the Gambia
Department Name: Disease Control and Elimination Theme

Abstract

Many countries have introduced pneumococcal conjugate vaccines (PCV) using three or four dose schedules with substantial reductions of invasive pneumococcal disease (IPD) and pneumonia. Herd protection effects have prevented more cases than the direct effects in vaccinated children. Many African and Asian countries have now introduced PCV using the standard schedule of three doses in early infancy (3+0 schedule). Data from South Africa and Kenya suggest that direct and herd protection effects of PCV are substantial. In The Gambia, we have observed a 90% reduction in IPD due to vaccine serotypes (VT) following the introduction of PCV.

Global control of pneumococcal disease however, is hampered by the cost of PCV. Low-income countries receive subsidised vaccine through the GAVI Alliance. However, when countries' per capita income exceeds the World Bank 'low-income' threshold, they 'graduate' from GAVI support and co-payments increase substantially. GAVI will spend 2.8 billion USD on PCV in the next 5 years, which represents approximately half of its vaccine budget. Cost has prevented most middle-income countries from introducing PCV.

To be effective, a two-dose schedule of PCV must provide adequate direct protection in infancy and maintain the low transmission of VT pneumococci in the community that is critical to sustain herd protection. In fact, as immunisation programmes mature the role of herd protection becomes predominant over that of direct protection. Thus, we propose to test a vaccine schedule that includes a booster dose at 9 months of age, which when compared to schedules without a booster dose, has been associated with greater antibody levels at ages 1-4 years and greater protection against pneumococcal carriage at ages 1-2 years. We hypothesise that the first dose in the new schedule (at age 6 weeks) will provide protection against a low risk of VT disease from 2-9 months of age in our setting. We hypothesise that the booster dose at age 9 months will provide superior direct and herd protection effects from 1-3 years of age compared to the 3+0 schedule.

This trial will compare two- versus three-dose schedules of PCV delivered according to government immunisation clinics which serve subpopulations in discrete geographic areas. We plan to deliver two-dose (doses at age 6 weeks and 9 months, '1+1') or three-dose (doses at age 6, 10, 14 weeks, '3+0') schedules to infants resident in the trial area over a period of 4 years. The immunisation programme will administer vaccines at 68 immunisation clinics serving separate catchment populations (clusters). The immunisation clinic catchment population will be randomised to either trial group (1+1 or 3+0). Safety monitoring by surveillance for IPD, pneumonia and mortality in the 1-59 month age group will be conducted throughout the trial. After allowing time for the potentially different effects of the two schedules to develop, the study endpoints will be measured during the 4th year of the trial. The primary endpoint will be nasopharyngeal carriage of VT pneumococci in children aged 1-59 months with clinical pneumonia. The secondary endpoint will be VT carriage in infants aged 6-12 weeks presenting for their 1st dose of PCV. The analysis will test whether the difference in VT carriage between the two groups is less than a pre-set threshold.

Mathematical modelling will explore the role of the booster dose and the coverage needed to induce herd protection. Modelling inputs will include trial data and data from surveys of pneumococcal carriage and interpersonal contact patterns in the community. We will conduct a cost-effectiveness analysis of the 1+1 versus 3+0 schedule. Finally, working with WHO we will conduct a multi-country investigation of factors that will influence the implementation of 1+1 schedule.

Technical Summary

Global control of pneumococcal disease is hampered by the cost of pneumococcal conjugate vaccine (PCV). GAVI will spend 2.8 billion USD on PCV in the next 5 years and country co-payments to GAVI are substantial. Cost prevents middle-income countries from introducing PCV.

We propose to test a schedule that includes a booster dose at 9 months of age. We hypothesise that the first dose in the new schedule, at age 6 weeks, will provide protection against a low risk of disease from 2-9 months of age in our setting and that the booster dose will provide superior direct and herd protection effects from 1-3 years of age.

The trial will compare two- versus three-dose schedules in a cluster-randomised fashion according to immunisation clinics which serve subpopulations in discrete geographic areas.

We will deliver two-dose ('1+1') or three-dose ('3+0') schedules to infants resident in the trial area over a period of 4 years. The national immunisation programme will administer vaccines at 68 immunisation clinics serving separate catchment populations (clusters). The clusters will be randomised to either group in a 1:1 ratio. Safety monitoring for IPD, radiologic pneumonia and mortality in the 1-59 month age group will be conducted throughout. The trial endpoints will be measured during the 4th year of the trial. The primary endpoint will be the prevalence of nasopharyngeal (NP) vaccine-type (VT) pneumococcal carriage in children aged 1-59 months with clinical pneumonia. The secondary endpoint will be VT pneumococcal carriage in unimmunised infants aged 6-12 weeks. Analysis will test whether the difference in VT carriage between the two groups is less than a pre-set threshold.

Mathematical modelling will explore the role of the booster dose and the coverage needed to induce herd protection. We will conduct a cost-effectiveness analysis comparing 1+1 and 3+0 schedules, and a multi-country investigation of factors influencing the implementation of 1+1 schedules.

Planned Impact

The GAVI Alliance will be a major beneficiary of the trial findings. If low-income countries transitioned to two-dose (1+1) schedules for pneumococcal conjugate vaccine (PCV) then GAVI Alliance expenditure could be reduced by up to $330 million USD per year. Donors to the GAVI Alliance may also benefit from reduced requests for finance. The UK for example, has pledged 2.1 billion USD to GAVI in the next 5 years (29% of the total GAVI budget). If Ministries of Health are able to adopt 1+1 schedules, national immunisation programme costs will be reduced by 5%-15% in GAVI eligible countries, 15%-40% in GAVI graduating countries, and upwards of 50% in middle-income countries which must purchase PCV on the open market.

Ministries of Health and immunisation programmes in low-income countries will benefit from our findings as will National Immunisation Technical Advisory Groups. Assuming the 1+1 schedule is non-inferior to the three-dose (3+0) schedule, low-income countries may transition to the new schedule. In doing so they will benefit their whole populations by providing a more flexible, acceptable, and sustainable pneumococcal vaccination programme. The reduction from three to two doses of PCV in the schedule will result in: one less injection to administer, additional 'space' for new vaccines, reduced cold-chain requirements, reduced staff time and reduced injection pain for infants and mothers.

Ministries of Finance may benefit from reduced expenditure on immunisation. Regulatory authorities would use the trial data to evaluate proposals to introduce the 1+1 schedule in their jurisdictions. Other groups with an interest in the trial will be community stakeholders and UNICEF.

Immunisation programmes in middle-income countries may also benefit. The beneficiaries would be children and older individuals gaining access to the benefits of PCV in countries that decide to introduce PCV based on the trial findings and the cost-effectiveness benefits. Even in high-income countries, transition to a 1+1 schedule would result in more sustainable immunisation programmes with greater potential to introduce additional beneficial vaccines.

This trial will complement other studies investigating the role of the 1+1 schedule, providing the only data from a typical African setting. This trial will provide definitive results generalisable to a range of different settings. This is the ideal setting in which a study would detect the inferiority of a PCV schedule that relies on herd protection compared to another because herd protection is most difficult to establish in situations where infection pressure is high. Thus, if this trial demonstrates the non-inferiority of the 1+1 schedule one may infer that it would be non-inferior in a wide range of settings. Importantly, this trial will include disease and mortality measures which will provide confidence in the use of 1+1 schedules in settings with high rates of child morbidity and mortality. Thus, the study will act as a pivotal trial influencing global recommendation for immunisation.

The proposed mathematical modelling will generate further evidence to support the generalisation of the trial findings. The model will illustrate the role of the booster dose, and its coverage, in generating herd protection.

Perhaps the most profound impact of this study is its potential to usher in a new approach to disease control through immunisation. It will demonstrate a fundamentally new approach; an initial schedule introduced to control disease followed by transition to a schedule with fewer doses but able to maintain disease control. If this new approach proves feasible, we may see a new era of more flexible, acceptable, and less costly immunisation programmes worldwide.

The ultimate impact of the trial will be new country introductions of PCV with greater global coverage of PCV and accelerated reductions in child mortality due to pneumococcal disease.

Publications

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Title Audio consent tools 
Description Audio files of project information in four different local languages. 
Type Of Art Film/Video/Animation 
Year Produced 2018 
Impact More accurate explanation of the project to potential participants who do not speak English. 
 
Title Study logo and advertisements 
Description Study logo and advertisements in health facilities. 
Type Of Art Image 
Year Produced 2019 
Impact Raised awareness of the study in our community. 
 
Description Institut Pasteur - Pasteur Network CoReSciF committee
Geographic Reach Multiple continents/international 
Policy Influence Type Membership of a guideline committee
URL https://pasteur-network.org/
 
Description Member GAVI RTHI Executive Team
Geographic Reach Multiple continents/international 
Policy Influence Type Participation in a guidance/advisory committee
 
Description Member of the GAVI Alliance Research and Technical Institute constituency
Geographic Reach Multiple continents/international 
Policy Influence Type Participation in a guidance/advisory committee
 
Description Member of trial advisory committee
Geographic Reach Africa 
Policy Influence Type Participation in a guidance/advisory committee
 
Description PhD Supervisor - RS
Geographic Reach Africa 
Policy Influence Type Influenced training of practitioners or researchers
 
Description A cluster-randomized non-inferiority trial of the effect of a two compared to three dose schedule of pneumococcal conjugate vaccine
Amount $667,576 (USD)
Funding ID OPP1138798 
Organisation Bill and Melinda Gates Foundation 
Sector Charity/Non Profit
Country United States
Start 09/2017 
End 09/2021
 
Description A cluster-randomized non-inferiority trial of the effect of a two...
Amount $1,389,016 (USD)
Funding ID INV-006724 
Organisation Bill and Melinda Gates Foundation 
Sector Charity/Non Profit
Country United States
Start 09/2017 
End 01/2024
 
Description Infections and Immunity Board
Amount £472,378 (GBP)
Funding ID MR/V011626/1 
Organisation United Kingdom Research and Innovation 
Sector Public
Country United Kingdom
Start 01/2022 
End 06/2023
 
Description Mucosal Pathogens Research Unit, NIHR
Amount £302,547 (GBP)
Organisation University College London 
Sector Academic/University
Country United Kingdom
Start 10/2018 
End 09/2021
 
Description Pneumococcal Vaccine Schedules (PVS) - Survey of Health Care Worker and Parent Experience of Alternative (doses scheduled at age 6 weeks and 9 months) and Standard (doses scheduled at age 6, 10, and 14 weeks) Schedules
Amount $24,000 (USD)
Organisation World Health Organization (WHO) 
Sector Public
Country Global
Start 05/2023 
End 10/2023
 
Description R21
Amount $250,000 (USD)
Funding ID RC108688MRC 
Organisation National Institute of Allergy and Infectious Diseases (NIAID) 
Sector Public
Country United States
Start 07/2018 
End 05/2020
 
Title Audio and video tools for informed consent in four different local languages 
Description Video and audio files presenting standardised informed consent information to potential participants in a trial that will enroll approximately 40,000 infants 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? Yes  
Impact Better understanding of the trial by potential participants and more streamlined procedures for informed consent 
 
Title Birth, enumeration application 
Description A PC application to allow immediate enumeration of newborns in the study area. 
Type Of Material Improvements to research infrastructure 
Year Produced 2019 
Provided To Others? Yes  
Impact Capability added to MRCG at LSHTM data management department. 
 
Title Electronic Medical Record System 
Description An off-line, integrated, electronic medical record system to be used at 11 different health facilities including the MRCG at LSHTM laboratory in Basse 
Type Of Material Improvements to research infrastructure 
Year Produced 2019 
Provided To Others? Yes  
Impact Capability added to MRCG at LSHTM data management department. 
 
Title Electronic application for real-time recording of vaccine administration 
Description We designed and implemented an electronic application to capture all vaccine administration in the study area, with a birth cohort of 10,000 per year. 
Type Of Material Improvements to research infrastructure 
Year Produced 2017 
Provided To Others? No  
Impact Greatly eased and improved the quality of vaccination information in the study area. 
 
Title Laboratory Electronic Medical Record 
Description We designed and implemented an electronic application to enter laboratory information for the study. 
Type Of Material Improvements to research infrastructure 
Year Produced 2019 
Provided To Others? No  
Impact Greatly increased the quality of laboratory data. 
 
Title Remote trial monitoring application 
Description An online application used by trial monitors to remotely view study data and to perform trial monitoring procedures. 
Type Of Material Improvements to research infrastructure 
Year Produced 2019 
Provided To Others? No  
Impact Greatly eased the work on the trial monitors and facilitated the resolution of monitor queries by study staff. 
 
Title Remote XRay reading application 
Description Application allowing remote view and interpretation of XRays for research purposes. 
Type Of Material Data handling & control 
Year Produced 2020 
Provided To Others? No  
Impact Eased logistics and standardisation of research XRay reading. 
 
Title Trial database network 
Description A network of databases for the collection and storage of trial related data on enrolment, vaccination, clinical, laboratory, and trial monitoring. 
Type Of Material Data handling & control 
Year Produced 2019 
Provided To Others? No  
Impact Essential to the conduct of the trial. 
 
Description Collaboration with mathematical modelling department at LSHTM 
Organisation London School of Hygiene and Tropical Medicine (LSHTM)
Country United Kingdom 
Sector Academic/University 
PI Contribution I won the grant
Collaborator Contribution Developed a mathematical model to predict the impact of pneumococcal vaccination given different scheduling and coverage scenarios.
Impact None yet.
Start Year 2017
 
Description Microarray serotyping QC 
Organisation St George's University of London
Country United Kingdom 
Sector Academic/University 
PI Contribution Specified the QC needs for pneumococcal serotyping.
Collaborator Contribution Agreed to conduct external QC for pneumococcal serotyping.
Impact No outputs yet. This is a multi-disciplinary collaboration combining genomic microbiology.
Start Year 2020
 
Description PVS - WHO EPI 
Organisation World Health Organization (WHO)
Country Global 
Sector Public 
PI Contribution Design of KAP survey for carers and HCWs regarding alternative PCV scheduling.
Collaborator Contribution Advice on framework for survey and presentation of results to WHO SAGE committee on PCV policy.
Impact Not applicable
Start Year 2022
 
Description PVS cluster-randomised trial design and conduct 
Organisation Government of Finland
Department National Public Health Institute
Country Finland 
Sector Public 
PI Contribution Design of trial, preparation of funding proposal, obtained funding, arranged investigator meetings.
Collaborator Contribution Provided expertise on cluster-randomised trials, site visits, investigator meetings.
Impact None
Start Year 2018
 
Description Yellow Fever serology with Bernard Nocht Institute for Tropical Medicine 
Organisation Bernhard Nocht Institute for Tropical Medicine
Country Germany 
Sector Academic/University 
PI Contribution Designed study, submitted funding proposal and obtained funding for collaborative study of immunological interaction between PCV and YF vaccines.
Collaborator Contribution Provided technical expertise on Yellow Fever serology.
Impact None
Start Year 2019
 
Title Alternative Pneumococcal Vaccine Schedule 
Description Alternative schedule for pneumococcal conjugate vaccination - evaluating the effect on immunogenicity 
Type Therapeutic Intervention - Vaccines
Current Stage Of Development Wide-scale adoption
Year Development Stage Completed 2020
Development Status Under active development/distribution
Clinical Trial? Yes
Impact In 2020, the UK became the first country to introduce the alternative schedule for PCV. 
 
Title Clinical trial of PCV scheduling, immunogenicity and pneumococcal acquisition 
Description A reduced dose schedule of PCV in late stage trials; funded by MRC/UKAID/Wellcome/NIHR and BMGF 
Type Therapeutic Intervention - Vaccines
Current Stage Of Development Wide-scale adoption
Year Development Stage Completed 2021
Development Status Under active development/distribution
Clinical Trial? Yes
Impact International cooperation to generate the data and evidence required for WHO to review global recommendations for PCV scheduling. 
 
Title Pneumococcal conjugate vaccine schedule 
Description Alternative schedule for PCV. This is a phase IV trial. 
Type Therapeutic Intervention - Vaccines
Current Stage Of Development Wide-scale adoption
Year Development Stage Completed 2018
Development Status Under active development/distribution
Clinical Trial? Yes
Impact None yet 
 
Title Pneumococcal vaccine schedule including a booster dose - duration of protection 
Description Duration of protection of pneumococcal vaccine schedule including a booster dose 
Type Therapeutic Intervention - Vaccines
Current Stage Of Development Late clinical evaluation
Year Development Stage Completed 2022
Development Status Under active development/distribution
Clinical Trial? Yes
UKCRN/ISCTN Identifier ISRCTN 72821613
Impact Not applicable 
URL http://www.isrctn.com/ISRCTN72821613
 
Title Application to record in real-time the residency status of infants in the study area 
Description A PC application for use in the field to record residency information on infants and allow real-time generation of a confirmed residency record in the demographic surveillance system 
Type Of Technology Software 
Year Produced 2018 
Impact Immediate registration of infants as residents avoids the cumbersome process of confirmation of residency by demographic surveillance which takes at least 8 months. 
 
Title Electronic Medical Record 
Description Offline application to collect standardised data for paediatric patients attending health facilities in the study area 
Type Of Technology Software 
Year Produced 2019 
Impact Essential to study conduct. 
 
Title Online Trial Monitoring 
Description Application allows remote viewing of trial source data for trial monitors to conduct independent monitoring of trial activities. 
Type Of Technology Webtool/Application 
Year Produced 2019 
Impact Eased the logistics of trial monitoring in our remote location. 
 
Title Real-time vaccination record 
Description Offline application to capture all vaccines administered to all children in the study area. 
Type Of Technology Software 
Year Produced 2018 
Impact Essential to study conduct. 
 
Description Abstract presentation 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Abstract presentation of the study design at ISPPD on 16th April 2018.
Year(s) Of Engagement Activity 2018
URL https://isppd.kenes.com/2018/Pages/default.aspx#.XHbYZ6CnyUl
 
Description Conference Presentation 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Presentation to the University of Otago Global Health Institute annual conference
Year(s) Of Engagement Activity 2020
URL https://www.otago.ac.nz/global-health/
 
Description Invited speaker 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Conference presentation
Year(s) Of Engagement Activity 2022
 
Description Presentation at LSHTM 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Professional Practitioners
Results and Impact Presentation to the Vaccine Centre at LSHTM describing the design of the study in order to raise aware and seek feedback on design issues.
Year(s) Of Engagement Activity 2017
 
Description Presentation at National University of Singapore 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Presentation to public health/epidemiology/statistics research audience at the National University of Singapore on 13th April 2018.
Year(s) Of Engagement Activity 2018
 
Description University Visit 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Professional Practitioners
Results and Impact 12 members of the Australian National University Global Health Department attended my presentation, which was followed by questions and then led to two ongoing work projects.
Year(s) Of Engagement Activity 2019
 
Description Webinar - Boston University 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Presentation on pneumococcal disease and vaccination in The Gambia to 30 members of the Boston University Global Health Department.
Year(s) Of Engagement Activity 2021
 
Description World Immunisation Week webinar, LSHTM Vaccine Centre 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Professional Practitioners
Results and Impact Webinar presentation on pneumococcal vaccine scheduling for the LSHTM Vaccine Centre during World Immunisation Week
Year(s) Of Engagement Activity 2020
URL https://www.lshtm.ac.uk/research/centres/vaccine-centre