Translational approaches to improving cancer screening and diagnosis
Lead Research Organisation:
MRC Cancer Cell Unit
Abstract
As we understand more about how tumours arise, it should be possible to devise better strategies to diagnose and treat cancer. We are aiming to develop more effective ways to detect common malignancies, through an understanding of the biology of cancer cells. We are currently analysing a test that we have developed to improve diagnosis of cancers at a number of sites in the body, including cervix, mouth and bowel. For the first two cancers we are working in collaboration with colleagues in Bangalore, India. In addition, we are investigating the mechanisms by which some types of human papillomavirus, the wart virus, cause cancer in the genital tract, particularly the cervix. We are studying the process by which fragments of the virus are inserted into the DNA of infected cells, as well as the significance of changes in the levels of cellular genes that are associated with the development of malignancy. This work may lead to methods to predict how aggressive a particular tumour will be, so that each patient receives neither too little nor too much treatment, and may also suggest new strategies for treating the disease.
Technical Summary
We aim to: (i) use minichromosome maintenance proteins (MCMs) as biomarkers to improve cancer screening and (ii) study mechanisms of human papillomavirus (HPV)-associated carcinogenesis, in order to develop more effective prognostic and therapeutic interventions for cervical cancer, an epithelial malignancy of major global importance. We demonstrated the clinical value of MCM immunocytochemistry in improving the early detection of several common malignancies, including cervical, colorectal and lung cancer. The first clinical product is now in use internationally and a second generation version is in major FDA trials. We use a unique preclinical model of HPV-related carcinogenesis, validated through a large tissue resource, to study relationships between viral and host factors in the early stages of the cervical metaplasia-dysplasia-carcinoma sequence. As part of this work we discovered the role of two genes that are frequently over-expressed in cervical cancers and will study the potential of one of these, the cytokine receptor OSMR, to act as a cell surface target for antibody-based inhibition. We will further investigate the mechanisms by which HPV oncogene expression is deregulated during cervical carcinogenesis and study the significance of viral physical state (episomal vs. integrated) and site of integration into the host genome, as well as mechanisms of HPV persistence in cervical epithelial cells. We aim to develop new tools for diagnosis and treatment at different stages in the lengthy progression sequence from HPV infection to malignancy. Important clinical benefits of this work will be reduced morbidity and costs associated with over-treatment of non-progressive cervical pre-cancers and improved therapeutic options in cervical carcinomas, particularly early-stage disease.
People |
ORCID iD |
Nicholas Coleman (Principal Investigator) |
Publications

Aravinthan A
(2012)
Vacuolation in hepatocyte nuclei is a marker of senescence.
in Journal of clinical pathology

Aravinthan A
(2013)
Hepatocyte senescence predicts progression in non-alcohol-related fatty liver disease.
in Journal of hepatology

Bailey S
(2014)
Serum microRNA screening for DICER1-associated pleuropulmonary blastoma.
in Pediatric blood & cancer

Caffarel MM
(2013)
Tissue transglutaminase mediates the pro-malignant effects of oncostatin M receptor over-expression in cervical squamous cell carcinoma.
in The Journal of pathology

Caffarel MM
(2014)
Oncostatin M receptor is a novel therapeutic target in cervical squamous cell carcinoma.
in The Journal of pathology

Carter SA
(2012)
Lipoprotein lipase is frequently overexpressed or translocated in cervical squamous cell carcinoma and promotes invasiveness through the non-catalytic C terminus.
in British journal of cancer

Coleman N
(2009)
Minichromosome maintenance proteins in cancer screening.
in European journal of cancer (Oxford, England : 1990)

Coleman N
(2016)
Virus and Host Events in Squamous Carcinogenesis.
in The Keio journal of medicine

Collinson K
(2014)
Age-related biological features of germ cell tumors.
in Genes, chromosomes & cancer

Dall KL
(2008)
Characterization of naturally occurring HPV16 integration sites isolated from cervical keratinocytes under noncompetitive conditions.
in Cancer research
Description | Cancer Research UK Science Plan Review: Biomarkers. |
Geographic Reach | National |
Policy Influence Type | Contribution to a national consultation/review |
Description | Experimental Cancer Medicine Centres (ECMC) Steering Group: Standardisation of analysis and reporting of circulating miRNAs by RTqPCR |
Geographic Reach | Multiple continents/international |
Policy Influence Type | Membership of a guideline committee |
Description | Addenbrooke's Charity, Project Grant |
Amount | £56,517 (GBP) |
Organisation | Addenbrooke's Charitable Trust (ACT) |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2012 |
End | 01/2013 |
Description | Addenbrookes Charity, Consumables Grant |
Amount | £45,781 (GBP) |
Organisation | Addenbrooke's Charitable Trust (ACT) |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2006 |
End | 01/2007 |
Description | Amgen Studentship scheme |
Amount | £2,000 (GBP) |
Organisation | Amgen Inc |
Sector | Private |
Country | United States |
Start | 06/2010 |
End | 09/2010 |
Description | Assessing the clinical utility of blood-based microRNAs for the management of malignant germ cell tumours |
Amount | £32,611 (GBP) |
Organisation | University of Cambridge |
Department | Isaac Newton Trust |
Sector | Academic/University |
Country | United Kingdom |
Start | 02/2016 |
End | 01/2018 |
Description | CLIC Sargent Project Grant |
Amount | £79,960 (GBP) |
Organisation | CLIC Sargent |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2006 |
End | 01/2009 |
Description | CRUK Project Grant |
Amount | £10,000 (GBP) |
Organisation | Cancer Research UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2007 |
End | 01/2008 |
Description | CRUK Project Grant |
Amount | £14,223 (GBP) |
Organisation | Cancer Research UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2007 |
End | 01/2008 |
Description | Children with Cancer UK project grant |
Amount | £148,000 (GBP) |
Organisation | Children with Cancer UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 09/2014 |
End | 10/2017 |
Description | Children with Cancer UK project grant |
Amount | £99,840 (GBP) |
Organisation | Children with Cancer UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 01/2012 |
End | 01/2014 |
Description | Cytosystems Collaborative Project Grant |
Amount | £8,000 (GBP) |
Organisation | Cytosystems Ltd |
Sector | Private |
Country | United Kingdom |
Start | 01/2009 |
End | 01/2010 |
Description | Improving Outcomes for Children and Young Adults with Extracranial Germ Cell Tumours |
Amount | $2,300,000 (USD) |
Funding ID | RG79925 |
Organisation | St. Baldrick's Foundation |
Sector | Charity/Non Profit |
Country | United States |
Start | 02/2016 |
End | 01/2021 |
Description | Institute of Cancer - Kavragiilidou |
Amount | £23,186 (GBP) |
Organisation | Cancer Research UK |
Sector | Charity/Non Profit |
Country | United Kingdom |
Start | 09/2007 |
End | 10/2010 |
Description | MRC Clinical Training Fellowship |
Amount | £230,961 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 01/2008 |
End | 01/2011 |
Description | MRC Clinical Training Fellowship - Murray |
Amount | £230,968 (GBP) |
Organisation | Medical Research Council (MRC) |
Sector | Public |
Country | United Kingdom |
Start | 01/2009 |
End | 12/2011 |
Title | Archive of cervical squamous cancers and pre-cancers |
Description | In collaboration with Kidwai Institute, India and University of Aberdeen, we have obtained a collection of cervical squamous cell carcinomas and squamous intraepithelial lesions (n=~70). We have systematically characterised global changes in genomic DNA, messenger RNA and microRNA levels, and are currently examining relationships between the data sets, in collaboration with bioinformatics colleagues in Cambridge. |
Type Of Material | Biological samples |
Year Produced | 2006 |
Provided To Others? | Yes |
Impact | Improved understanding of the biology of cervical squamous cell neoplasia. |
Title | UK archive of paediatric malignant germ cell tumours |
Description | With the approval of the Children's Cancer and Leukaemia Group, we obtained the entire UK collection of paediatric malignant germ cell tumours (n=120). We have systematically characterised global changes in genomic DNA, messenger RNA and microRNA levels, and are currently examining relationships between the data sets, in collaboration with bioinformatics colleagues in Cambridge. |
Type Of Material | Biological samples |
Year Produced | 2006 |
Provided To Others? | Yes |
Impact | Improved understanding of the biology of malignant germ cell tumours in children, including the differences that expalin differences in clinical behaviour compared to equivalent tumours in adults. |
Title | W12 cell line |
Description | W12 cell line, a model of cervical carcinogenesis. W12 is a non-clonal cell culture, propagated from a cervical low-grade squamous intraepithelial lesion (LSIL) that arose following natural cervical infection with HPV16, which represents a unique system for studying early events in HPV-associated carcinogenesis. At early passages, Southern blotting reveals approximately 100 human papillomavirus type 16 (HPV16) episomes per cell, with no detectable integrants, and the cells recapitulate an LSIL in organotypic tissue culture. Long term in vitro culture series are characterised by spontaneous clearance of episomes and the emergence of cells containing integrated HPV16, with different integrants being selected in different culture series. These changes are associated with the development of high level genomic instability and phenotypic progression through high-grade SIL to squamous cell carcinoma. |
Type Of Material | Cell line |
Year Produced | 2006 |
Provided To Others? | Yes |
Impact | W12 is acknowledged as the only cell line system in the world that accurately models cervical carcinogenesis following natural infection with HPV16. |
Title | Pipeline for robust serum microRNA detection/analysis in malignant germ cell tumours |
Description | Published in BJC in 2016 - details included in manuscript (PMID 26671749) |
Type Of Material | Data analysis technique |
Year Produced | 2016 |
Provided To Others? | Yes |
Impact | Interest from other national and international research groups to replicate our model/pipeline |
Title | swatCGH |
Description | Sliding windows adaptive thresholds CGH is an automated array comparative genomic hybridisation analysis software written in R for Linux / Unix and incorporating distributed processing with condor middleware. Roberts I, Carter SA, Scarpini CG, Karagavriilidou K, Barna JC, Calleja M, Coleman N (2012) A high throughput computational framework for identifying significant copy number aberrations from array comparative genomic hybridisation data Advances in Bioinformatics 2012:876976 |
Type Of Material | Computer model/algorithm |
Year Produced | 2012 |
Provided To Others? | Yes |
Impact | We have developed an R based strategy to region of interest detection. swatCGH is a BASH wrapper to R and condor camgrid. It automates the process of sending the array data to condor camgrid. It manages the linking to snapCGH for preprocessing, undertaking region analysis with custom functions, and returning the results in a manageable web style format. |
URL | http://www.path.cam.ac.uk/research/investigators/coleman/swatCGH/004.html |
Description | Beckton Dickinson, Global |
Organisation | Becton, Dickinson and Company |
Country | United States |
Sector | Private |
PI Contribution | Development of MCM technology for FDA approval. |
Collaborator Contribution | Research discussionsresearch discussions |
Impact | Development of MCM technology for FDA approval. |
Description | Beckton Dickinson, Global |
Organisation | Becton, Dickinson and Company |
Country | United States |
Sector | Private |
PI Contribution | Development of MCM technology for FDA approval. |
Collaborator Contribution | Research discussionsresearch discussions |
Impact | Development of MCM technology for FDA approval. |
Description | Development of MCM technology for bladder cancer screening |
Organisation | Cytosystems Ltd |
Country | United Kingdom |
Sector | Private |
PI Contribution | Research discussions |
Collaborator Contribution | Research discussions |
Impact | Development of MCM technology for FDA approval. |
Start Year | 2006 |
Description | Geeta Mukherjee |
Organisation | University of California, San Diego (UCSD) |
Department | Department of Pathology |
Country | United States |
Sector | Academic/University |
PI Contribution | Exchange of research resources knowledge |
Collaborator Contribution | Exchange of research resources knowledge |
Impact | PubMed ID- 17516585, 17471471, 17342084 |
Start Year | 2006 |
Description | Margaret Stanley |
Organisation | University of Cambridge |
Department | Department of Pathology |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Exchange of knowledge and research methods |
Collaborator Contribution | Exchange of knowledge and research methods |
Impact | PubMed ID- 19645010, 19035938, 18652663, 18413654, 17642065, 16973673, 16505361 |
Description | VarleighDx |
Organisation | VarleighDx |
Country | United Kingdom |
Sector | Private |
PI Contribution | Launch of a CE-marked test for early diagnosis of pancreatic cancer |
Collaborator Contribution | Commercialisation of MCM test |
Impact | Launch of a CE-marked test for early diagnosis of pancreatic cancer |
Start Year | 2016 |
Title | CANCER MARKERS FOR PROGNOSIS AND SCREENING OF ANTI-CANCER AGENTS |
Description | RN3 RNAse III endonuclease (D rosha) is a component in the biogenesis of MicroRNAs (miRNAs). Drosha induces changes the miRNA expression profile of cervical squamous cell carcinoma (SCC) cells. Methods for identifying or staging cancer in an individua l comprise determining the level of Drosha in a sample of cancer cells obtained from the individual. An increased level of Drosha in the sample of cancer cells indicat es an adverse clinical outcome for the individual. Screening assays for anti-cancer agents modulate the expression of Drosha and/or those miRNAs whose level of expression is modulated by the level of Drosha expression. |
IP Reference | WO2008125883 |
Protection | Patent granted |
Year Protection Granted | 2008 |
Licensed | No |
Impact | Ongoing research into mechanisms underlying the effects of Drosha over-expression. |
Title | Detection of dysplastic or neoplastic cells using anti-MCM2 antibodies |
Description | Determination of cellular growth abnormality, particularly cancerous abnormality, by detection of target polypeptides or encoding mRNA, where the target polypeptides are members of the preinitiation complex of DNA replication in tissue, cells or fluid. Target polypeptides include CDC6, MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7. Test samples include tissue of the cervix (both biopsy and smear samples), breast, colon, lung, bladder, skin, larynx, oesophagus, bronchus, lymph nodes and urinary tract (both biopsy and cytology smear samples), in determination of cancerous and precancerous cellular growth abnormality, and cells spun from urine, blood and serum, in determination of haematological malignancies and evidence of metastatic sarcoma and carcinoma. |
IP Reference | US2003143646 |
Protection | Patent granted |
Year Protection Granted | 2003 |
Licensed | Yes |
Impact | Licenced to Beckton Dickinson and Cytosystems. Licencing income being received. |
Title | Substrate for holding an array of experimental samples |
Description | A 3-dimensional substrate for improved packing density in microarrays, and for registering sample deposition. |
IP Reference | |
Protection | Protection not required |
Year Protection Granted | 2006 |
Licensed | No |
Impact | Partnership with MiniFAB Pty Ltd, Victoria, Australia. |
Title | Cytosystems solution |
Description | An MCM-based test for early detection of bladder cancer using cytology samples. |
Type | Diagnostic Tool - Non-Imaging |
Current Stage Of Development | Late clinical evaluation |
Year Development Stage Completed | 2009 |
Development Status | Under active development/distribution |
Clinical Trial? | Yes |
Impact | Still in development by Cytosystems Ltd. |
Title | ProExC |
Description | A molecular test for early diagnosis of cervical cancer and pre-cancer in cytology and histology preparations. |
Type | Diagnostic Tool - Non-Imaging |
Current Stage Of Development | Wide-scale adoption |
Year Development Stage Completed | 2006 |
Development Status | Under active development/distribution |
Clinical Trial? | Yes |
Impact | Increasing use in US and elsewhere, both for intended use and off label use. |
Title | SurePathPlus |
Description | An MCM-based test for primary cervical screening. |
Type | Diagnostic Tool - Non-Imaging |
Current Stage Of Development | Early clinical assessment |
Year Development Stage Completed | 2009 |
Development Status | On hold |
Impact | Currently on hold. |
Description | Cambridge Science Festival |
Form Of Engagement Activity | Participation in an activity, workshop or similar |
Part Of Official Scheme? | Yes |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | Cancer screening part of the exhibit involve microscopes to compare Pap and MCM screening. Increased understanding of cancer screening with MCM proteins. |
Year(s) Of Engagement Activity | 2006,2007,2008,2009,2010 |
Description | MRC Press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Public/other audiences |
Results and Impact | Press release on screening for oral cancer. http://www.mrc.ac.uk/Newspublications/News/MRC001721 Increased profile. |
Year(s) Of Engagement Activity | 2007 |
Description | MRC Press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Fighting HPV could help cervical cancer develop http://www.mrc.ac.uk/Newspublications/News/MRC003341 Increased profile. |
Year(s) Of Engagement Activity | 2006 |
Description | MRC Press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | National |
Primary Audience | Public/other audiences |
Results and Impact | Spotting cancer quicker in developing countries http://www.mrc.ac.uk/Newspublications/News/MRC003623 Increased profile. |
Year(s) Of Engagement Activity | 2007 |
Description | MRC Press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Public/other audiences |
Results and Impact | Cambridge scientists discover an additional step along the road to cervical cancer http://www.mrc.ac.uk/Newspublications/News/MRC002008 Increased profile. |
Year(s) Of Engagement Activity | 2006 |
Description | MRC Showcase Oncology and Tumour Biology |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | Yes |
Geographic Reach | International |
Primary Audience | Health professionals |
Results and Impact | Lecture entitled: New targets for improving the clinical management of cervical neoplasia. Increased awareness of the work's clinical potential. |
Year(s) Of Engagement Activity | 2007 |
Description | MRC press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Public/other audiences |
Results and Impact | Press release on MRC website- A new 'smear test' to prevent anal cancer http://www.mrc.ac.uk/Newspublications/News/MRC004911 Increased profile |
Year(s) Of Engagement Activity | 2008 |
Description | MRC press release |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Public/other audiences |
Results and Impact | Press interest following receipt of Medical Futures Innovation Award. Innovation honour for cancer cell scientists http://www.mrc.ac.uk/NewsViewsAndEvents/News/MRC003798 Widespread press coverage, increasing awareness of the work and its potential. |
Year(s) Of Engagement Activity | 2007 |
Description | University of Cambridge Press Release - LIN28/let-7 axis in germ cell tumours |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Professional Practitioners |
Results and Impact | Interest from media and reported in national press, August 2013 Increased correspondence from patient groups and other health care professionals re the potential for targetting this pathway therapeutically |
Year(s) Of Engagement Activity | 2014 |
URL | http://www.cam.ac.uk/research/news/scientists-discover-a-molecular-switch-in-cancers-of-the-testis-a... |