Cross-cutting theme 1: Big Data and Computing innovation

Lead Research Organisation: University of Oxford
Department Name: UNLISTED

Abstract

The emergence of new digital technologies is allowing huge quantities of information on health exposures and outcomes to be captured, stored, and analysed using advanced statistical techniques. ‘Big Data’ will provide new ways to conduct research and offers the potential of a dramatic increase in the scale and efficiency of clinical studies. This pioneering programme of work within PHRU aims to harness Big Data methodology to facilitate large-scale epidemiological studies and improve the efficiency of randomised trials by identifying barriers to their efficient conduct.
This work is supported by a computing team that produces and maintains systems designed to meet the specific requirements of our new and on-going studies, and to ensure that they are sufficiently adaptable to provide a platform for future work. Our systems focus on aspects that are key to study quality: recruitment of large numbers of eligible participants; data collection and study conduct; study management, coordination and oversight; laboratory management including analysis and storage; ascertainment, confirmation and classification of outcome; and analysis, reporting and dissemination.

Technical Summary

The emergence of new digital technologies is allowing huge quantities of information on health exposures and outcomes to be captured, stored, and analysed using advanced statistical techniques. ‘Big Data’ will provide new ways to conduct research and offers the potential of a dramatic increase in the scale and efficiency of clinical studies.
The work of this cross-cutting theme comprises 3 related elements of direct relevance to the quality and operational efficiency of large randomized controlled trials and prospective cohort studies:

(1) Novel methods for data acquisition and analysis of phenotype
We are developing new approaches for assembling sufficiently large numbers of people with the relevant condition; ascertaining a suitable range of important clinical outcomes over a prolonged period of time; and measuring aspects of exposure and disease that are not well represented in medical records or are poorly captured through simple questionnaires. Our methods take advantage of the widespread use of routine electronic clinical records and increasing adoption of digital technology (including smartphones and mobile sensors). The work is being conducted in partnership with Health Data Research UK, the NIHR Health Informatics Collaborative, and NHS Digital and is of direct relevance to the UK Life Sciences Industrial Strategy. The individual trials and cohort studies designed and conducted by the PHRU programmes provide opportunities for the development and evaluation of new methods, including demonstration of their impact.

(2) Efficient methods for data curation and study coordination
The scale and duration of our cohort studies and randomized trials pose significant challenges for data management. Not only are the studies large, they are very long-term (many decades) and typically contain sensitive and/or personal data. This work requires careful evaluation of new technologies (e.g. virtualisation of storage and networking, firewalls and malware protection, archiving and large data storage), adaptation to and implementation of evolving data standards, and development of new approaches to meet the operational needs of those managing the research projects. Key areas of innovation and development include a secure, large-scale data storage and distribution system for clinical study data (including genotyping and imaging), use of CDISC and other data standards for clinical trials and meta-analyses, and provision of software systems for effective study management, clinical and operational oversight, and central statistical monitoring.

(3) Pro-active approaches to Information Governance and Research Regulation
We continue to play a leading role in national and international efforts to promote proportionate and coordinated approaches to information governance, including through contributions to the NHS Digital Research Advisory Group and Office for Strategic Coordination of Health Research. Likewise, we continue to make the case for reform in clinical trials Good Clinical Practice “GCP” regulations through our MoreTrials campaign and leading contributions to the activities of the FDA Clinical Trials Transformation Initiative.

People

ORCID iD

Related Projects

Project Reference Relationship Related To Start End Award Value
MC_UU_00017/1 01/04/2019 31/03/2024 £5,782,000
MC_UU_00017/2 Transfer MC_UU_00017/1 01/04/2019 31/03/2024 £2,644,000
MC_UU_00017/3 Transfer MC_UU_00017/2 01/04/2019 31/03/2024 £3,269,000
MC_UU_00017/4 Transfer MC_UU_00017/3 01/04/2019 31/03/2024 £1,831,000
MC_UU_00017/5 Transfer MC_UU_00017/4 01/04/2019 31/03/2024 £2,183,000
 
Description Interviewed for Lord O'Shaughnessy report into the future of commercial clinical trials
Geographic Reach Multiple continents/international 
Policy Influence Type Contribution to new or improved professional practice
 
Description BHF Oxford Centre of Research Excellence Infrastructure Award
Amount £30,000 (GBP)
Organisation British Heart Foundation (BHF) 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2019 
 
Description MRC UK-Malaysia Health Research Partnership
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Organisation Medical Research Council (MRC) 
Sector Public
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Description RECOVERY (PI)
Amount £11,400,000 (GBP)
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Description Chair, NHS DigiTrials Board 
Organisation NHS Digital
Country United Kingdom 
Sector Public 
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Collaborator Contribution Invitation services piloted for UK vaccine trials and the PRINCIPLE trial Microsoft and IBM partners contributed technical and service design expertise.
Impact Feasibility service (beta release); support for the RECOVERY trial including information on study outcomes to support 6 key findings that have impacted NHS and global treatment policies for COVID-19 (dexamethasone & tocilizumab save lives; hydroxychloroquine, lopinavir, azithromycin, convalescent plasma, colchicine are ineffective).
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Description NIHR Health Informatics Collaborative 
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Impact n/a
Start Year 2019
 
Description NIHR Health Informatics Collaborative (HIC) Cardiovascular Scientific Steering Group 
Organisation National Institute for Health Research
Country United Kingdom 
Sector Public 
PI Contribution data sharing agreements between NHS Trusts
Collaborator Contribution data sharing agreements between NHS Trusts
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Description National Sentinel Stroke Audit Data 
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Sector Academic/University 
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Start Year 2020
 
Description Obesity and non-communicable disease in Malaysia: an imaging study of 6000 adults in the Malaysian Cohort Study 
Organisation University Kebangsaan Malaysia Medical Centre
Country Malaysia 
Sector Hospitals 
PI Contribution bCollaboration with the Collaboration with Universiti Kebangsaan Malaysia. Funding from MRC UK-Malaysia Health Research Partnership. Title: Obesity and non-communicable disease in Malaysia: an imaging study of 6000 adults in the Malaysian Cohort Study. The collaboration will facilitate an imaging sub-study of 6000 participants of the Malaysian Cohort Study. There is a formal agreement in place.
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Department Medicine
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Department Oxford Vaccine Group
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Description Activity for the RECOVERY Trial 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
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Geographic Reach International
Primary Audience Media (as a channel to the public)
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Geographic Reach Local
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Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
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Form Of Engagement Activity Participation in an activity, workshop or similar
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Form Of Engagement Activity A formal working group, expert panel or dialogue
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Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
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Description Oxford Open Doors 2019 
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Part Of Official Scheme? No
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Primary Audience Public/other audiences
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Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
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Geographic Reach International
Primary Audience Media (as a channel to the public)
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Part Of Official Scheme? No
Geographic Reach National
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Description The Life Scientific 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
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