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COVID-19 Drug-Screening and Resistance Hub (CRUSH)

Lead Research Organisation: University of Glasgow
Department Name: UNLISTED

Abstract

CRUSH was founded in 2020 to address an acute gap in the landscape of antiviral development. The response to the COVID-19 pandemic demonstrated the high demand and limited provision of facilities and expertise to aid the development of therapeutics and devices targeting high-consequence viruses.
The CVR is one of a limited number of UK institutions with the necessary infrastructure and virology expertise to support such studies. We have developed models that can support SARS-CoV-2 research, but they must be handled in high containment facilities (known as biosafety level 3, BSL-3) and require specialised molecular virology expertise. This type of work can help screen and identify potential antiviral drugs that can ultimately be used to help patients.
CRUSH activities have initially focused on SARS-CoV-2, but we have now adapted our models to include other emerging viruses of concern, e.g. monkeypox. We want CRUSH to be a stable?and sustainable?resource for the UK’s research communities?to accelerate drug discovery for?any?known or novel?high consequence?virus requiring high containment facilities. A strategic goal of CRUSH and partners is to establish a foundation for broader collaboration and innovation across the Life Sciences sector and to be prepared to rapidly respond to future viral outbreaks.

Technical Summary

Working in collaboration with LifeArc, MRC and Drug Discovery Unit (DDU) at the University of Dundee, the CVR created a translational hub for antiviral drug screening and resistance development. CRUSH is a fully integrated single-site hub with biocontainment facilities and expertise dedicated to accelerating antiviral therapeutic discovery for SARS-CoV-2 and other high consequence viruses requiring BSL2 (CL2) & BSL3 (CL3) containment.
It is a one-stop facility with capabilities to perform medium- to high-throughput screens of antivirals, serology/virus neutralisation assays, hit validations in primary cultures and against panels of variant viruses, kinetic assays, assays to determine genetic barrier to resistance to selected hits, real-time monitoring of emerging mutations, and finally efficacy evaluations in pre-clinical small animal models.
We will develop the newly established CRUSH platform as a vehicle for translation in the CVR and to boost our engagement with industry, but also to interface with the CVR’s Preparedness Platform. Established with funding from LifeArc and the MRC, CRUSH is a translational hub, facilitating the CVR’s interface with industry. It is a one-stop, self-sustaining facility designed to aid pre-clinical development of antiviral drugs against SARS-CoV-2 and other viruses requiring CL3 containment. Over the next quinquennium, we will further develop high-throughput assays that can be performed at both CL2 and CL3 levels to increase the capacity of the facility, and the use of experimental animal models. Specifically, CRUSH conducts drug screening and neutralisation assays for SARS-CoV-2 including alpha, beta, gamma, delta, omicron variants and new variants as they arise. New assays have been developed for monkeypox (Mpox) virus and influenza A. Other viral targets currently included under development for screening services include seasonal coronaviruses, influenza A/B, RSV, enteroviruses, rotavirus and arboviruses.
CRUSH will support the implementation of a quality management system and integration of laboratory information management system (LIMS) encompassing an ELN/Bio-registry, to support data integrity and management. Additionally, the optimisation and development of a high-throughput screening system and completion/publication of in vivo models and exemplar studies. Our animal licence has now been extended to encompass transmission studies, vaccines/immunomodulators and flow cytometry and we intend to extend this further to include Mpox virus and anti-viral drug evaluation.

The long-term goal of CRUSH is to create a stable and sustainable resource for the UK’s academic and industrial community to help accelerate drug discovery for any known or novel high consequence virus requiring high containment facilities.

Publications

10 25 50
 
Description Accelerating the discovery, development and/or testing of therapeutics that can be deployed to treat the symptoms of COVID-19
Amount £2,026,857 (GBP)
Organisation LifeArc 
Sector Charity/Non Profit
Country United Kingdom
Start 03/2021 
End 03/2025
 
Description Evolutionarily smart vaccine strain selection for proactive vaccinology
Amount £8,566,200 (GBP)
Funding ID MR/Y004337/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 01/2024 
End 12/2028
 
Description Monkeypox Rapid Research Response
Amount £739,657 (GBP)
Funding ID BB/X011607/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 09/2022 
End 08/2023
 
Description The G2P2 virology consortium: keeping pace with SARS-CoV-2 variants, providing evidence to vaccine policy, and building agility for the next pandemic
Amount £7,793,458 (GBP)
Funding ID MR/Y004205/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 09/2023 
End 09/2027
 
Title Acquisition of a high-content imaging system 
Description We recently acquired a high-content cell imaging multimode microscope/reader and compatible microplate stacker. 
Type Of Material Improvements to research infrastructure 
Year Produced 2024 
Provided To Others? No  
Impact The equipment has just been obtained. Using this microscope, we will be able to conduct new fluorescence-based assays that, for example, calculate the percentage of infected cells or monitor intracellular changes following treatment with antiviral compounds of interest. It will also allow for unbiased and automated plaque and infectious foci-counting to be able to capture data from plaque/focus-forming assays in a more efficient manner. 
 
Title Development of a digital pathology pipeline 
Description We established a digital pathology pipeline for histopathology diagnosis of animal tissues and organs of small animals experimentally infected with SARS-CoV-2. - Quantification of morphological findings - Immunohistochemistry and immunofluorescence for immunophenotyping and detection of viral or cellular proteins of interest - In situ-hybridisation (bright field and fluorescent; including multiplex staining) to detect viral and cellular RNA interest - Software-assisted quantification (HALO, Aperio, QuPath) of immunohistochemistry, immunofluorescence and in situ-hybridisation of whole scanned slides - Scanning and archiving of whole microscopic slides - Deep phenotyping of tissue microenvironment (PhenoCycler) - Spatial transcriptomics using the Nanostring GeoMx-technology 
Type Of Material Technology assay or reagent 
Year Produced 2023 
Provided To Others? Yes  
Impact The digital pathology pipeline has enabled us to perform: - Quantification of morphological findings - Immunohistochemistry and immunofluorescence for immunophenotyping and detection of viral or cellular proteins of interest - In situ-hybridisation (bright field and fluorescent; including multiplex staining) to detect viral and cellular RNA interest - Software-assisted quantification (HALO, Aperio, QuPath) of immunohistochemistry, immunofluorescence and in situ-hybridisation of whole scanned slides - Scanning and archiving of whole microscopic slides - Deep phenotyping of tissue microenvironment (PhenoCycler) - Spatial transcriptomics using the Nanostring GeoMx-technology 
 
Title Development of bespoke antiviral screening assays 
Description As part of CRUSH remit, our team developed and optimised different in vitro cell-based virus infections assays to evaluate the efficacy of new and existing antiviral (e.g. SARS-CoV-2, MPXV) compounds and drugs. 
Type Of Material Technology assay or reagent 
Year Produced 2023 
Provided To Others? Yes  
Impact Such adaptations have enabled us to accurately evaluate the antiviral activities of compounds of interest, and resulted in one publication to-date (Samolej et al 2024 Microbiology Spectrum 20:e0407223. 
 
Description Anti-SARS-COV-2 NSP14 Inhibitors: Target Engagement Assay Development 
Organisation University of Dundee
Department Drug Discovery Unit
Country United Kingdom 
Sector Academic/University 
PI Contribution • All cell related work • Prepare cell culture lysates (Vero E6 ± SARS-CoV-2 ± compound) in Trizol for total RNA extraction and ship to Dundee for CAP-MAP and analysis of mRNA cap methylation, i.e. target engagement. • Prepare cell culture supernatants (Vero E6 ± SARS-CoV-2 ± compound) in Trizol for RNA extraction and qPCR and analysis of the viral load, i.e. antiviral activity. • qRT-PCR on samples to determine the viral load Mutual contributions 1. Knowledge sharing in various disciplines, including biology, virology and medicinal chemistry. 2. Sharing of experimental methods and contribution to/reviewing of anticipated manuscript.
Collaborator Contribution • Select and provide the appropriate active/inactive compounds to be tested in this collaboration. • Biology support in the experimental design at CRUSH. • CAP-MAP on samples provided by CRUSH group. • Data analysis and interpretation. Mutual contributions 1. Knowledge sharing in various disciplines, including biology, virology and medicinal chemistry. 2. Sharing of experimental methods and contribution to/reviewing of anticipated manuscript.
Impact Outcomes: • The initial experiments were unsuccessful and we are in the process of repeating some of this work to provide further samples for our partners at DDU to test, currently awaiting outcome of these experiments.
Start Year 2023
 
Description Coronavirus molecular biology and virus-host interactions 
Organisation University of Dundee
Department MRC Protein Phosphorylation and Ubiquitylation Unit
Country United Kingdom 
Sector Academic/University 
PI Contribution Together with several CVR colleagues, we have initiated work on coronaviruses with the aim of establishing a long term programme on these viruses at the CVR. We are have propagated the Wuhan COVID-19 virus and a number of related clincal isolates,as well as the hazard group 2 coronaviruses HCoV-229E, HCoV-OC43, and HCoV-NL63. We are also expecting to generate stocks of SARS-CoV. In addition to this we have put in place protocols and systems to generate/rescue all these viral isolates by reverse genetics to allow mutational studies and to generate reporter viruses (such as GFP-expressing viruses). We have generated a large number of antibodies and other reagents against different CoVs, and some of this work is being done in collaboration with the MRC Phophorylation Unit in Dundee. We are generating SARS-CoV-2 mutants by reverse genetics as part of our role in the national consortium G2P-UK (Genotype to Phenotype), the aim of which is to determine the biological properties of SARS-CoV-2 lineages as they arise in the UK. Establishment of CVR-CRUSH, a COVID-19 Drug-Screening and Resistance Hub) dedicated to accelerating antiviral therapeutic discovery for SARS-CoV-2 and any other high consequence viruses. We have established antiviral screens and virus neutralisation assays. We are putting in place state-of-the-art high-throughput robotic systems for enhancement of our drug screenning capabilities, and are in the process of establishing small animal models for the pre-clinical evaluation of drugs and therapeutics in in vivo settings.
Collaborator Contribution Establishment of various virological assay systems Production of antibodies, cell lines and other reagents
Impact Papers published to date: Rihn et al. (2021). PLoS Biol 19(2): e3001091. https://doi.org/10.1371/journal.pbio.3001091. Gordon et al. (2020). Science 370, eabe9403 (2020). DOI: 10.1126/science.abe9403. Szemiel et al (2021). PLoS Pathogens 17(9): e1009929. https://doi.org/10.1371/journal.ppat.1009929. Davies et al (2022). PLoS Pathogens DOI: 10.1101/2021.06.23.21259327, PMCID: PMC8639073. Zhou et al (2022). Cell Reports https://doi.org/10.1016/j.celrep.2022.110344. Lista et al (2022). J. Virol., 96 (23) e01250-22, https://doi.org/10.1128/jvi.01250-22. Bouhaddou et al (2023). Cell 186, 1-18. https://doi.org/10.1016/j.cell.2023.08.026. Reuschl et al (2024). Nat. Microbiol. https://doi.org/10.1038/s41564-023-01588-4. Ogger et al. (2024). Frontiers in Immunology, 15:1383612. https://doi.org/10.3389/fimmu.2024.1383612. Mears et al (2025). PLoS Biol 23(1): e3002982. https://doi.org/10.1371/journal.pbio.3002982. Screening of antiviral drugs and antibodies against SARS-CoV-2, virus neutralisation and other virological assays, various virus inactivation studies.
Start Year 2020
 
Description Coronavirus molecular biology and virus-host interactions 
Organisation University of Glasgow
Department MRC - University of Glasgow Centre for Virus Research
Country United Kingdom 
Sector Academic/University 
PI Contribution Together with several CVR colleagues, we have initiated work on coronaviruses with the aim of establishing a long term programme on these viruses at the CVR. We are have propagated the Wuhan COVID-19 virus and a number of related clincal isolates,as well as the hazard group 2 coronaviruses HCoV-229E, HCoV-OC43, and HCoV-NL63. We are also expecting to generate stocks of SARS-CoV. In addition to this we have put in place protocols and systems to generate/rescue all these viral isolates by reverse genetics to allow mutational studies and to generate reporter viruses (such as GFP-expressing viruses). We have generated a large number of antibodies and other reagents against different CoVs, and some of this work is being done in collaboration with the MRC Phophorylation Unit in Dundee. We are generating SARS-CoV-2 mutants by reverse genetics as part of our role in the national consortium G2P-UK (Genotype to Phenotype), the aim of which is to determine the biological properties of SARS-CoV-2 lineages as they arise in the UK. Establishment of CVR-CRUSH, a COVID-19 Drug-Screening and Resistance Hub) dedicated to accelerating antiviral therapeutic discovery for SARS-CoV-2 and any other high consequence viruses. We have established antiviral screens and virus neutralisation assays. We are putting in place state-of-the-art high-throughput robotic systems for enhancement of our drug screenning capabilities, and are in the process of establishing small animal models for the pre-clinical evaluation of drugs and therapeutics in in vivo settings.
Collaborator Contribution Establishment of various virological assay systems Production of antibodies, cell lines and other reagents
Impact Papers published to date: Rihn et al. (2021). PLoS Biol 19(2): e3001091. https://doi.org/10.1371/journal.pbio.3001091. Gordon et al. (2020). Science 370, eabe9403 (2020). DOI: 10.1126/science.abe9403. Szemiel et al (2021). PLoS Pathogens 17(9): e1009929. https://doi.org/10.1371/journal.ppat.1009929. Davies et al (2022). PLoS Pathogens DOI: 10.1101/2021.06.23.21259327, PMCID: PMC8639073. Zhou et al (2022). Cell Reports https://doi.org/10.1016/j.celrep.2022.110344. Lista et al (2022). J. Virol., 96 (23) e01250-22, https://doi.org/10.1128/jvi.01250-22. Bouhaddou et al (2023). Cell 186, 1-18. https://doi.org/10.1016/j.cell.2023.08.026. Reuschl et al (2024). Nat. Microbiol. https://doi.org/10.1038/s41564-023-01588-4. Ogger et al. (2024). Frontiers in Immunology, 15:1383612. https://doi.org/10.3389/fimmu.2024.1383612. Mears et al (2025). PLoS Biol 23(1): e3002982. https://doi.org/10.1371/journal.pbio.3002982. Screening of antiviral drugs and antibodies against SARS-CoV-2, virus neutralisation and other virological assays, various virus inactivation studies.
Start Year 2020
 
Description Develop and validate a qPCR method for AAV2 
Organisation UK Health Security Agency
Country United Kingdom 
Sector Public 
PI Contribution UKHSA require an accurate standardised PCR test for detection of AAV2 for UK wide screening. We are required to test, optimise, and develop SOP for detection of AAV2 by qPCR and prepare a standard operating procedure for transfer back into UKHSA sites.
Collaborator Contribution Provision of 30-40 patient samples, and access to existing qPCR testing protocols currently in use across industry, government and academia.
Impact This is multidisciplinary involving a collaboration between government organisations and our research centre.
Start Year 2024
 
Description Evaluation of antiviral efficacy of Lectin compounds against MPXV With University of Michigan 
Organisation University of Michigan
Country United States 
Sector Academic/University 
PI Contribution H84T and H84G BanLEc derivatives were provided to us for use in our Mpox screening workflow to test and the screen the material alongside our standard inhibitor controls for activity against MPXV, assessing their potential antiviral activity at different concentrations in cultured cell lines. Critical to this project was having access to the circulating clades (MPXV Clades 1A,2A and 2B) and the required CL3 containment laboratory. We carried out in vitro experiments to determine if the compounds could be an effective antiviral treatment option.
Collaborator Contribution Development of compounds with potential activity against Mpox clades resistant to current treatment regimes.
Impact David Markovitz M.D. is a Professor of Internal Medicine in the Division of Infectious Diseases who also has appointments in the programs in Cellular and Molecular Biology, Cancer Biology, and Immunology at the University of Michigan, this project was facilitated through the UKHSA, who linked our institutions. The particular compounds tested did not show activity against the Mpox clades screened. Any modifications to the compounds could be screened in the future.
Start Year 2024
 
Description Monkeypox Rapid Response Consortium 
Organisation Animal and Plant Health Agency
Country United Kingdom 
Sector Public 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation Defence Science & Technology Laboratory (DSTL)
Country United Kingdom 
Sector Public 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation Guy's and St Thomas' NHS Foundation Trust
Country United Kingdom 
Sector Public 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation Health Protection Agency
Country United Kingdom 
Sector Public 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation Imperial College London
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation The Pirbright Institute
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation University of Birmingham
Department Institute of Microbiology and Infection
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation University of Cambridge
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation University of Edinburgh
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation University of Oxford
Department Oxford Hub
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Monkeypox Rapid Response Consortium 
Organisation University of Surrey
Country United Kingdom 
Sector Academic/University 
PI Contribution Purpose of the consortium was to study the monkeypox outbreak to better understand how to tackle it. We developed an new antiviral drug assay for mpox and screened a range of compounds prepared by Jason Mercer's group, University of Birmingham. This new assay workflow enabled us to work on subsequent industry funded project, and assist in the response to help test samples from a NHS patient suffering from a drug resistant strain of monkeypox.
Collaborator Contribution Preparation of the compound library for screening through our assay, from the University of Birmingham. Results from these screens showed that the tested bisbenzimide compounds were inhibitors of both prototypic and pandemic potential poxviruses and could be developed for use in situations where anti-poxvirus drug resistance may occur.
Impact Outputs: -https://doi.org/10.1128/spectrum.04072-23 -development of mpox antiviral drug screening assay Outcomes: -expanded our antiviral workflow for poxviruses, with future work planned to adapt to a high throughput assay screen -able to respond to healthcare emergencies relating to mpox virus -partners on this project have a policy making remit
Start Year 2023
 
Description Study to evaluate potential antiviral efficacy of a small molecule RNA against SARS-CoV-2 in vivo 
Organisation Pompeu Fabra University
Country Spain 
Sector Academic/University 
PI Contribution Design and conduct a small in vivo study to examine the effectiveness of a RNA molecule, developed by University Pompeu Fabra, against SARS-CoV-2. We conducted a small study, in accordance with the 3Rs principle, to examine the effect of CircRNA treatment in hamsters infected with SARS-CoV-2.
Collaborator Contribution Partner provided the CircRNA samples and data around mode of action.
Impact Outputs: -publication pending Outcomes:
Start Year 2023
 
Description Test antiviral activity of neutralising antibodies against SARS-CoV-2 In vitro and In vivo screens 
Organisation Medical Research Council (MRC)
Department MRC Human Genetics Unit
Country United Kingdom 
Sector Academic/University 
PI Contribution To carry out in vitro and in vivo screens of monoclonal antibodies that are hypothesised to target the SARSCoV-2 membrane protein. We have assessed and optimised the screens for cell lines and conditions in in vitro and will then progress to in vivo hamster models.
Collaborator Contribution To develop and examine the potential for monoclonal antibodies that can target the SARS-CoV-2 membrane protein as a new approach to COVID-19 treatment.
Impact No outputs as yet, project still active, funded through MRC IAA award.
Start Year 2024
 
Description PCR Workshop for Higher and Advanced Higher pupils are invited to complete a viral diagnosis using PCR, participate in an interesting ethical debate, and attend a careers session. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Higher and Advanced Higher pupils attended a workshop event to complete a viral diagnosis using PCR, participate in an interesting ethical debate, and attend a careers session. STEM outreach event and preparation, participation and demonstration by technicians working as part of this award.
Year(s) Of Engagement Activity 2023,2024