MRC Centre for Outbreak Analysis and Modelling Renewal
Lead Research Organisation:
Imperial College London
Department Name: School of Public Health
Abstract
The threat from new infectious diseases has been highlighted in recent years by the 2003 SARS epidemic, H5N1 'bird flu' and the 2009 H1N1 flu pandemic. Preparing for such eventualities is a priority for public health agencies and governments worldwide. Also, as scientific research delivers new approaches to controlling existing infectious diseases such as malaria, HIV and polio, there is a need to determine what interventions are likely to work best to limit the disease and illness caused by a specific disease in a particular setting.
In this context, computer modelling of the spread of diseases in populations coupled with scientifically rigorous data analysis have proven themselves as powerful tools for giving insight into how diseases spread and what can be done to limit that control that spread. The Centre for Outbreak Analysis and Modelling undertakes research on these scientific methods and applies them to disease threats of concern.
A key feature of the Centre is the close links it has made with with public health agencies - such as the UK Health Protection Agency, the Centers for Disease Control and Prevention in the US (CDC), and the World Health Organization (WHO) - organisations which have to formulate and implement strategies to control infectious diseases.
The senior scientists in the Centre are world-leaders in infectious disease modelling and analysis. They have broad experience in responding to real epidemics (e.g. BSE/vCJD, SARS, H5N1 bird flu and the 2009 flu pandemic), and undertaking epidemiological research on endemic diseases (such as malaria, HIV and polio). Their work directly influences disease control policy through the many interactions the Centre has with public health organisations and governments.
The funding provided by MRC and Imperial College have allowed dedicated investment into the development of close collaborative partnerships with HPA, CDC and WHO - as well as with other important organisations who work on improving health in developing countries (notably the Bill and Melinda Gates Foundation). With each, we are working on a large number of research projects which have both scientific interest to Centre researchers and are contributing to the evidence base needed for public health decisions. Centre funding supports a core technical capacity available to all projects, and pays for dedicated postdoctoral research staff who spend substantial time at WHO (Geneva) and CDC (Atlanta) undertaking epidemiological research with the staff of those agencies and facilitating collaboration with other Centre staff.
MRC funding has also facilitated a greater focus on collaboration, training and career development within the Centre - training the next generation of quantitative infectious disease epidemiologists. We are also involved in increasing knowledge of advanced modelling methods in public health institutions and the wider infectious disease research community, and so have run a number of introductory vocational short courses, both at Imperial College, but also on partner sites in Geneva and London.
All of this applied activity depends on the more fundamental research undertaken in the Centre on the epidemic dynamics of different diseases, how diseases evolve genetically over time, and on analysing new approaches to control or treat diseases. Much of this research is multidisciplinary, involving Centre researchers working with leading clinical and experimental scientists around the world.
Continued funding for the Centre will allow the collaborative partnerships established in the last 4 years to be sustained and enhanced, and new collaborations with researchers and health agencies in countries such as China and India to be developed. It will also fund new priority research areas, including work to implement the analysis and modelling methods developed by Centre staff as user-friendly computer programs that can be used by public health professionals around the world.
In this context, computer modelling of the spread of diseases in populations coupled with scientifically rigorous data analysis have proven themselves as powerful tools for giving insight into how diseases spread and what can be done to limit that control that spread. The Centre for Outbreak Analysis and Modelling undertakes research on these scientific methods and applies them to disease threats of concern.
A key feature of the Centre is the close links it has made with with public health agencies - such as the UK Health Protection Agency, the Centers for Disease Control and Prevention in the US (CDC), and the World Health Organization (WHO) - organisations which have to formulate and implement strategies to control infectious diseases.
The senior scientists in the Centre are world-leaders in infectious disease modelling and analysis. They have broad experience in responding to real epidemics (e.g. BSE/vCJD, SARS, H5N1 bird flu and the 2009 flu pandemic), and undertaking epidemiological research on endemic diseases (such as malaria, HIV and polio). Their work directly influences disease control policy through the many interactions the Centre has with public health organisations and governments.
The funding provided by MRC and Imperial College have allowed dedicated investment into the development of close collaborative partnerships with HPA, CDC and WHO - as well as with other important organisations who work on improving health in developing countries (notably the Bill and Melinda Gates Foundation). With each, we are working on a large number of research projects which have both scientific interest to Centre researchers and are contributing to the evidence base needed for public health decisions. Centre funding supports a core technical capacity available to all projects, and pays for dedicated postdoctoral research staff who spend substantial time at WHO (Geneva) and CDC (Atlanta) undertaking epidemiological research with the staff of those agencies and facilitating collaboration with other Centre staff.
MRC funding has also facilitated a greater focus on collaboration, training and career development within the Centre - training the next generation of quantitative infectious disease epidemiologists. We are also involved in increasing knowledge of advanced modelling methods in public health institutions and the wider infectious disease research community, and so have run a number of introductory vocational short courses, both at Imperial College, but also on partner sites in Geneva and London.
All of this applied activity depends on the more fundamental research undertaken in the Centre on the epidemic dynamics of different diseases, how diseases evolve genetically over time, and on analysing new approaches to control or treat diseases. Much of this research is multidisciplinary, involving Centre researchers working with leading clinical and experimental scientists around the world.
Continued funding for the Centre will allow the collaborative partnerships established in the last 4 years to be sustained and enhanced, and new collaborations with researchers and health agencies in countries such as China and India to be developed. It will also fund new priority research areas, including work to implement the analysis and modelling methods developed by Centre staff as user-friendly computer programs that can be used by public health professionals around the world.
Technical Summary
The threat to human populations from new and re-emerging pathogens has been highlighted in recent years by the 2003 SARS epidemic, the pandemic potential of the highly pathogenic H5N1 avian influenza strain and the 2009 H1N1 pandemic. Preparedness is therefore a key policy priority for public health agencies and governments worldwide. In addition, as novel vaccines, antimicrobials and other interventions are developed for endemic diseases, there is a need to extrapolate from clinical trial results to determine which combination of interventions gives the optimal (or most cost-effective) control strategy for a specific disease in a particular setting.
In this context, modern epidemiological modelling and analysis methods have proven themselves increasingly powerful tools for giving insight into the patterns of emergence of novel outbreaks, the transmission dynamics of endemic diseases and the options available for the control of both. In the last 4 years, the Centre for Outbreak Analysis and Modelling has facilitated the exploitation of cutting-edge quantitative epidemiological research by public health agencies and policy makers tasked with delivering response strategies to infectious disease threats.
Before the founding of the Centre, much of the interaction between the (world leading) researchers at the Centre and public health agencies (such as HPA, CDC or WHO) was sporadic and unsystematic, being difficult to fund from traditional project grants. Centre funding allows dedicated investment into the development and maintenance of close collaborative partnerships with HPA, CDC, WHO and BMGF. Centre funding supports a core technical capacity available to all projects, and pays for dedicated 'liaison' staff - postdocs who spend substantial time at WHO and CDC. Internally, Centre funding supports capacity-building, enhanced collaboration and an enhanced focus on career development - as well as vocational training of staff in public/global health agencies.
In this context, modern epidemiological modelling and analysis methods have proven themselves increasingly powerful tools for giving insight into the patterns of emergence of novel outbreaks, the transmission dynamics of endemic diseases and the options available for the control of both. In the last 4 years, the Centre for Outbreak Analysis and Modelling has facilitated the exploitation of cutting-edge quantitative epidemiological research by public health agencies and policy makers tasked with delivering response strategies to infectious disease threats.
Before the founding of the Centre, much of the interaction between the (world leading) researchers at the Centre and public health agencies (such as HPA, CDC or WHO) was sporadic and unsystematic, being difficult to fund from traditional project grants. Centre funding allows dedicated investment into the development and maintenance of close collaborative partnerships with HPA, CDC, WHO and BMGF. Centre funding supports a core technical capacity available to all projects, and pays for dedicated 'liaison' staff - postdocs who spend substantial time at WHO and CDC. Internally, Centre funding supports capacity-building, enhanced collaboration and an enhanced focus on career development - as well as vocational training of staff in public/global health agencies.
Planned Impact
As a translational research Centre, a key aspect of our primary mission is wider impact. Our goal is to improve public and global health decision making in relation to infectious disease control through the use of advanced statistical and mathematical modelling methods, with a particular emphasis on novel emerging infections or rapidly spreading disease outbreaks. We believe the only effective way of delivering on this goal is to form long-term collaborative partnerships with the leading public and global health organisations world-wide, providing analytical support and capacity building for those partners.
The 2009 H1N1 pandemic provided a concrete test of this vision. In the first few weeks of the pandemic, the Centre's response team rapidly scaled to involve over 30 staff, with individual components being led by Centre PIs, coordinated by the Director.
From the translational perspective, some of the most critical roles were the staff who acted as liaisons with our key public health partners (especially WHO and CDC), spending much of 2009 embedded in those organisations.
The success of this approach in 2009 has led us to formalise and extended this 'embedding' model of building collaborative partnerships. Following the pandemic, the Centre became the WHO Collaborating Centre for Infectious Disease Modelling, with a senior research fellow acting as our primary liaison with WHO. We have adopted a similar model with US CDC, with another senior postdoctoral researcher from the Centre is based in Atlanta for the majority of his time.
HPA has considerable modelling capacity itself (two groups, in Colindale and Porton Down), so the nature of its relationship with the Centre is rather different. The Colindale modelling unit is now headed by Dr Peter White, who splits his time between HPA (80%) and the MRC Centre at Imperial (20%), providing a natural bridge between us. Collaborative work with the Colindale group has increased dramatically over the last few years. The Centre also collaborates with and advises the Microbial Risk Assessment group at Porton Down, most notably on bioterrorism related topics.
A second important aspect of the relationship is coordination of parallel research efforts: the UK Dept of Health (DH) often calls upon HPA for quantitative analysis, and increasingly the MRC Centre is being called upon to either peer review this work or provide alternative independent analyses. As HPA evolves to become Public Health England, we expect this role to become more important.
Over the first term of the Centre we have also built close relationships with a number of other key global/public health bodies: BMGF, UNAIDS, European CDC, China CDC (on pandemic influenza) being just a few. Our relationship with BMGF is of particular strategic importance - both as a funder of Centre research, but more importantly as a key stakeholder in global health decision-making. The Centre's work on polio, malaria, HIV, dengue and influenza has been influential in shaping BMGF investment decisions.
In addition to formal research outputs, often the most important value we give to these organisations is advice provided from a dynamical modelling perspective. This analytical advisory role is multifaceted: from improving situational awareness in crises, advising on likely impact of interventions, undertaking rapid assessments of severity and disease burden, and advising on improving surveillance, study design and data capture systems.
Capacity building within our partner organisation is another priority, through informal skills transfer and formal training. The former occurs as a natural result of the degree of interaction, and for the latter we have run short (2-3 day) short courses on infectious disease modelling for WHO in Geneva (in 2010) and for CDC in Atlanta (in 2011, in collaboration with Harvard).
Attached letters of support from HPA, CDC, WHO and BMGF highlight the public health impact of the Centre.
The 2009 H1N1 pandemic provided a concrete test of this vision. In the first few weeks of the pandemic, the Centre's response team rapidly scaled to involve over 30 staff, with individual components being led by Centre PIs, coordinated by the Director.
From the translational perspective, some of the most critical roles were the staff who acted as liaisons with our key public health partners (especially WHO and CDC), spending much of 2009 embedded in those organisations.
The success of this approach in 2009 has led us to formalise and extended this 'embedding' model of building collaborative partnerships. Following the pandemic, the Centre became the WHO Collaborating Centre for Infectious Disease Modelling, with a senior research fellow acting as our primary liaison with WHO. We have adopted a similar model with US CDC, with another senior postdoctoral researcher from the Centre is based in Atlanta for the majority of his time.
HPA has considerable modelling capacity itself (two groups, in Colindale and Porton Down), so the nature of its relationship with the Centre is rather different. The Colindale modelling unit is now headed by Dr Peter White, who splits his time between HPA (80%) and the MRC Centre at Imperial (20%), providing a natural bridge between us. Collaborative work with the Colindale group has increased dramatically over the last few years. The Centre also collaborates with and advises the Microbial Risk Assessment group at Porton Down, most notably on bioterrorism related topics.
A second important aspect of the relationship is coordination of parallel research efforts: the UK Dept of Health (DH) often calls upon HPA for quantitative analysis, and increasingly the MRC Centre is being called upon to either peer review this work or provide alternative independent analyses. As HPA evolves to become Public Health England, we expect this role to become more important.
Over the first term of the Centre we have also built close relationships with a number of other key global/public health bodies: BMGF, UNAIDS, European CDC, China CDC (on pandemic influenza) being just a few. Our relationship with BMGF is of particular strategic importance - both as a funder of Centre research, but more importantly as a key stakeholder in global health decision-making. The Centre's work on polio, malaria, HIV, dengue and influenza has been influential in shaping BMGF investment decisions.
In addition to formal research outputs, often the most important value we give to these organisations is advice provided from a dynamical modelling perspective. This analytical advisory role is multifaceted: from improving situational awareness in crises, advising on likely impact of interventions, undertaking rapid assessments of severity and disease burden, and advising on improving surveillance, study design and data capture systems.
Capacity building within our partner organisation is another priority, through informal skills transfer and formal training. The former occurs as a natural result of the degree of interaction, and for the latter we have run short (2-3 day) short courses on infectious disease modelling for WHO in Geneva (in 2010) and for CDC in Atlanta (in 2011, in collaboration with Harvard).
Attached letters of support from HPA, CDC, WHO and BMGF highlight the public health impact of the Centre.
Organisations
- Imperial College London (Lead Research Organisation)
- University of KwaZulu-Natal (Collaboration)
- Baylor College of Medicine (Collaboration)
- PATH (Collaboration)
- Government of the Swiss Confederation (Collaboration)
- Malaria in Pregnancy Consortium (Collaboration)
- Johns Hopkins University (Collaboration)
- Indiana University (Collaboration)
- Biotechnology and Biological Sciences Research Council (BBSRC) (Collaboration)
- Pasteur Institute, Paris (Collaboration)
- Aarhus University (Collaboration)
- Ministry of Defence (Collaboration)
- Copenhagen Consensus Center (Collaboration)
- United States Agency for International Development (Collaboration)
- UNIVERSITY OF CAMBRIDGE (Collaboration)
- UNIVERSITY OF OXFORD (Collaboration)
- University of Maryland, College Park (Collaboration)
- UNIVERSITY OF GLASGOW (Collaboration)
- Industrial University of Santander (Collaboration)
- Emory University (Collaboration)
- London School of Hygiene and Tropical Medicine (LSHTM) (Collaboration)
- Drugs for Neglected Diseases initiative (DNDi) (Collaboration)
- UNIVERSITY OF EDINBURGH (Collaboration)
- National Institutes of Health (NIH) (Collaboration)
- Worldwide Antimalarial Resistance Network (Collaboration)
- European Centre for Disease Prevention and Control (ECDC) (Collaboration)
- PANGEA Consortium (Collaboration)
- Médecins Sans Frontières (MSF) (Collaboration)
- Medicines for Malaria Venture (MMV) (Collaboration)
- Penn State University (Collaboration)
- Global Fund to Fight AIDS, Tuberculosis and Malaria (Collaboration)
- Kenyan Institute for Medical Research (KEMRI) (Collaboration)
- International Society for Infectious Diseases (ISID) (Collaboration)
- UNIVERSITY OF LIVERPOOL (Collaboration)
- GlaxoSmithKline (GSK) (Collaboration)
- PoPART Consortium (Collaboration)
- University of Bristol (Collaboration)
- Makerere University (Collaboration)
- London School of Economics and Political Science (University of London) (Collaboration)
- Murdoch University (Collaboration)
- Joint United Nations Programme on HIV/AIDS (UNAIDS) (Collaboration)
- Centers for Disease Control and Prevention (CDC) (Collaboration)
- National Institute for Biological Standards and Control (NIBSC) (Collaboration)
- IMPERIAL COLLEGE LONDON (Collaboration)
- Department For Environment, Food And Rural Affairs (DEFRA) (Collaboration)
- China Centre for Disease Control (Collaboration)
- Government of Saudi Arabia (Collaboration)
- UNIVERSITY OF YORK (Collaboration)
- National Environment Agency (Collaboration)
- QIMR Berghofer Medical Research Institute (Collaboration)
- HealthMap (Collaboration)
- Christian Medical College, Vellore (Collaboration)
- Healthsites.io (Collaboration)
- University of California, San Francisco (Collaboration)
- University of Warwick (Collaboration)
- The Wellcome Trust Sanger Institute (Collaboration)
- Government of the UK (Collaboration)
- University of Bamako (Collaboration)
- Guangzhou No. 12 People's Hospital (Collaboration)
- University of Hong Kong (Collaboration)
- University of Pittsburgh (Collaboration)
- Intellectual Ventures (United States) (Collaboration)
- Tan Tock Seng Hospital (Collaboration)
- Sanofi Pasteur MSD (Collaboration)
- HARVARD UNIVERSITY (Collaboration)
- University of Florida (Collaboration)
- National Tuberculosis Institute (India) (Collaboration)
- University of Wisconsin-Madison (Collaboration)
- Joint Programming Initiative on Antimicrobial Resistance (Collaboration)
- PUBLIC HEALTH ENGLAND (Collaboration)
- Academic Medical Center (Collaboration)
- International Epidemiologic Databases to Evaluate AIDS (IeDEA) (Collaboration)
- Wellcome Trust (Collaboration)
- Oxitec Ltd (Collaboration)
- FIND Diagnostics (India) (Collaboration)
- Biomedical Research and Training Institute (BRTI) (Collaboration)
- Hannover Medical School (Collaboration)
- National Institute of Health, Pakistan (Collaboration)
- University of Bern (Collaboration)
- Antigen Discovery Inc (Collaboration)
- Chinese Center for Disease Control and Prevention (China CDC) (Collaboration)
- Center for Infectious Disease Modeling and Analysis (Collaboration)
- SWANSEA UNIVERSITY (Collaboration)
- University of Toronto (Collaboration)
- Kaiser Permanente Washington Health Research Institute (Collaboration)
- CLINTON HEALTH ACCESS INITIATIVE (Collaboration)
- Centre for Infectious Disease Research in Zambia (Collaboration)
- National Center for Scientific and Technological Research (CNRST) (Collaboration)
- Max Planck Society (Collaboration)
- Jinan University (Collaboration)
- Michigan State University (Collaboration)
- Experimental Zooprophylactic Institute of the Venezie (Collaboration)
- European Vaccine Initiative (EVI) (Collaboration)
- Stellenbosch University (Collaboration)
- UNSW Sydney (Collaboration)
- Bill & Melinda Gates Foundation (Collaboration)
- Sanofi (Collaboration)
- Colombian Institute of Family Welfare (Collaboration)
- Public Health Institute of Malawi (Collaboration)
- HIV Monitoring Foundation (SHM) (Collaboration)
- World Health Organization (WHO) (Collaboration)
- University College London (Collaboration)
- Institute for Health Metrics and Evaluation (IHME) (Collaboration)
- University of North Carolina at Chapel Hill (Collaboration)
- Brown University (Collaboration)
- University of Wisconsin-Milwaukee (Collaboration)
- University of Washington (Collaboration)
Publications
Bousema T
(2013)
Can field-based mosquito feeding assays be used for evaluating transmission-blocking interventions?
in Trends in parasitology
Bousema T
(2014)
Asymptomatic malaria infections: detectability, transmissibility and public health relevance.
in Nature reviews. Microbiology
Braham CA
(2018)
Management of tuberculosis by healthcare practitioners in Pakistan: A systematic review.
in PloS one
Britton T
(2015)
Five challenges for stochastic epidemic models involving global transmission.
in Epidemics
Brown T
(2016)
SimBac: simulation of whole bacterial genomes with homologous recombination.
in Microbial genomics
Bubendorfer S
(2016)
Genome-wide analysis of chromosomal import patterns after natural transformation of Helicobacter pylori.
in Nature communications
Butler AR
(2013)
Modelling the global competing risks of a potential interaction between injectable hormonal contraception and HIV risk.
in AIDS (London, England)
Cairns ME
(2015)
Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa.
in Malaria journal
| Guideline Title | "Estimating direct and indirect protection from influenza vaccination in the USA" (forthcoming) |
| Description | "Estimating direct and indirect protection from influenza vaccination in the USA" (forthcoming) for CDC (USA) containing information to be included in national messaging on vaccination |
| Geographic Reach | National |
| Policy Influence Type | Citation in clinical guidelines |
| Description | Advice to EU on H1N1 pandemic (ECDC, DG-SANCO) |
| Geographic Reach | Europe |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Advice to UK DH on pandemic planning via 'SPI' advisory committee |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Advice to UK DH on responding to the UK H1N1 pandemic |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Advice to US govt (White House, HHS, CDC) on pandemic planning |
| Geographic Reach | North America |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Advice to US govt (White House, HHS, CDC) on responding to the H1N1 pandemic |
| Geographic Reach | North America |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Advice to the World Health Organisation on the H1N1 pandemic |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | April 2017: Netherlands, audit of modelling activity by RIVM (Dutch Public Health Agency) |
| Geographic Reach | Europe |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Attendance at WHO policy meetings on anitmicrobial resistance and HIV prevention |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Attended Davos as one of three Imperial representatives (including Alice Ghast and Kieth Nions). Advice to policy makers |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Contribution to a national consultation/review |
| Impact | reputation (representing Imperial at global forum) |
| URL | https://youtu.be/Ws2VcwRFEIE |
| Description | Bill And Melinda Gates Strategy and Advisory Group |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Influenced the development of grant policy |
| Description | CDC - Disease Severity |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | CHPR Serology Surveillance Flu Steering Group - 2013 |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Improved information with which to choose influenza vaccine strategies |
| Description | Cabinet Office Advisory Committee |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Commissioner on Lancet Commission for Global Surgery - 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | Consise Steering Committee - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | More accurate assesment of influenza burden. |
| Description | Continuation from 2015 reporting on CRO work. Modelling being used to advocate for major policy shifts for TB control in the region, as used by WHO. |
| Geographic Reach | Asia |
| Policy Influence Type | Membership of a guideline committee |
| Description | Continue to have an impact on global polio policy |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Continued engagement with UNAIDS leaderships TH |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | _ |
| Description | Continued engagement with WHO leadership TH |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | _ |
| Description | Continued engagement with leadership at Bill & Melinda Gates Foundation TH |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | not known |
| Description | Continued engagment with the PEPFAR leadership TH |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | re-orientation of budgeting priorities -- but this is confidential stuff currently |
| Guideline Title | National Guideline on Treatment of Latent Tuberculosis Infection |
| Description | Contribution to NICE (The National Institute for Health and Care Excellence) Guidance on TB - 2015 |
| Geographic Reach | National |
| Policy Influence Type | Citation in clinical guidelines |
| URL | http://www.nice.org.uk/guidance/ng33/evidence/appendix-i-imperial-college-ltbi-treatment-report-30-a... |
| Description | Contributor to WHO research roadmap on Influenza |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Impact | Co-chaired one stream of WHO's periodic review of global influenza research priorities |
| URL | http://www.who.int/csr/research-and-development/r_d_blueprint_plan_of_action.pdf?ua+1 |
| Description | Contributor to WHO research roadmap on Zika |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Impact | Informed short term public health research priorities for responding to the Latin American Zika epidemic |
| URL | http://www.who.int/csr/research-and-development/r_d_zika_involvement/en/ |
| Description | Coordination of multi-country research on specific topics of interest to WHO (e.g. H1N1pdm infection) resulting in peer-reviewed publications MVK |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | Copenhagen Consensus -TB control in India |
| Geographic Reach | Local/Municipal/Regional |
| Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
| Impact | not yet known |
| Description | DEFRA - modelling |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | DH Flu colloquium led by SofS DH |
| Geographic Reach | National |
| Policy Influence Type | Contribution to a national consultation/review |
| Description | DH Pandemic Influenza Scientific Advisory Group |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Department of Health - SPI |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Department of Health Ebola modelling group (2014) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Provided expert advice on Ebola epidemic response in West Afica, and preparedness for the UK, to ensure that the UK Government is provided with a high standard of scientific advice to support the response in West Africa and preparedness for the UK. |
| Description | Development of platform RECON learn |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Description | EYE strategy subgroup for risk assessment (with WHO) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | EYE strategy subgroup for risk assessment (with WHO) - participation with other academics to provide advice (to policy makers) in WHO with the aim to influence policy and decision making |
| Description | Economic evaluation of London TB Find & Treat service (DH) |
| Geographic Reach | Local/Municipal/Regional |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.bmj.com/site/video/findandtreat.xhtml |
| Description | Economic modelling of TB in hard to reach groups |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | _ |
| Description | Eliminating Yellow fever Epidemics (EYE) WHO meeting |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.who.int/csr/disease/yellowfev/eye-strategy/en/ |
| Description | Elimination Scenario Planning (WHO Country Guidance Document) - 2013 |
| Geographic Reach | Africa |
| Policy Influence Type | Influenced training of practitioners or researchers |
| URL | http://www.who.int/malaria/publications/atoz/9789241507028/en/ |
| Description | Elimination Scenario Planning (WHO policy document) AG |
| Geographic Reach | Africa |
| Policy Influence Type | Citation in other policy documents |
| Description | Epi Et - and Field Epi Training Program (PHE/CDC courses). |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Impact | Helping to redesign teaching modules for these courses |
| Description | Estimating the epidemic potential of swine-origin H3N2v influenza virus - results presented during a briefing to the director of US CDC SC |
| Geographic Reach | North America |
| Policy Influence Type | Contribution to a national consultation/review |
| Description | Evaluation of the London TB Find and Treat Project |
| Geographic Reach | Local/Municipal/Regional |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | not known |
| Description | Evidence Review Group on Malaria Burden Estimation (WHO committee) AG |
| Geographic Reach | Africa |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Global Fund - develop KPIs for GF |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Supported the Global Fund with the development of their Key Performance Indicators (KPIs) |
| Description | Global Fund - secure agreement on GF investment case |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Support for the Global Fund on their investment decisions |
| Description | Global Plan for Insecticide Resistance Management (GPIRM) - WHO AG |
| Geographic Reach | Africa |
| Policy Influence Type | Citation in other policy documents |
| Description | Global polio immunisation |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | H5N1 Surveillance & Monitoring in Poultry |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Home Office - Security and Identity |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | IVCC talk - Bhatt - (relating to decisions) - budgeting vector control . Effect of interventions |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | India National TB programme - Modelling in Support of the National Strategic plan |
| Geographic Reach | National |
| Policy Influence Type | Contribution to a national consultation/review |
| Impact | not known yet |
| Description | Infectious disease modelling short course - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Impact | Informed public health professionals: what infectious diseases modelling can and can not do; what its data requirements are; how to critically appraise models. |
| URL | http://www.infectiousdiseasemodels.org/ |
| Description | Investment Case for Global Fund 2017 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Impact | TBC |
| URL | http://www.theglobalfund.org/documents/publications/other/Publication_InvestmentCase_Summary_en/ |
| Description | London TB Find and Treat service (Parliamentary Hearings) |
| Geographic Reach | National |
| Policy Influence Type | Contribution to a national consultation/review |
| URL | http://www.publications.parliament.uk/pa/ld200809/ldhansrd/text/90630-0001.htm |
| Description | MERS-CoV collaboration |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
| Impact | Improvements in survival, morbidity or quality of life re MERS Co-V. |
| Description | Malaria Policy Advisory Committee |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Market and transmission dynamics for efficient procurement of second-line TB drugs (2014) |
| Geographic Reach | National |
| Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
| Description | Measures of efficacy of anti-malaria interventions against malaria transmission |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.who.int/vaccine_research/malaria_malvac2010/en/index.html |
| Description | Member of the Scientific Programme Committee (CROI 'Conference on Retroviruses and Opportunistic Infections' 2016 Boston) - 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Description | Membership in Core WHO Committee on the use of ART (2015) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| URL | http://apps.who.int/iris/bitstream/10665/186275/1/9789241509565_eng.pdf?ua=1 |
| Description | Monitoring disappearence of polio type 2 globally, providing weekly analysis of data to "polio partners": Gates, WHO, CDC (April 2016) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | NERVTAG (New and Emerging Respiratory Virus Threats Advisory Group) - 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | NICE revision of guidelines for TB control |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.nice.org.uk/nicemedia/live/11978/56320/56320.pdf |
| Description | NIH (Expert consultation on finding 'unknowing' HIV) - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Impact | Improved regulatory environment in HIV. |
| Description | Norwegian National Institute of Public Health consultation on learning the lessons on Ebola -2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | Numerous citations in UK DH, US DHHS and WHO planning documents |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://europepmc.org/abstract/MED/16642006 |
| Description | Older adult Polio vaccination & infection - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | no information |
| Description | Outbreak response for yellow feevr in Angola |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://apps.who.int/iris/bitstream/10665/246103/1/WHO-YF-ENB-16.2-eng.pdf |
| Description | Paper (PMID: 26093978) on new vaccine strategies to finish polio eradication led to introduction of vaccine campaigns by Global Polio Eradication Programme in Nigeria, Pakistan and Afghanistan |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | Participation in evidence review group at the World Health Organization. |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.who.int/malaria/mpac/mpac-oct2017-erg-malaria-low-density-infections-session2.pdf?ua=1 |
| Description | Participation to the JMM (Joint Monitoring Mission) for the National Tuberculosis Programme assessment in India. Report availbale here: http://www.tbonline.info/media/uploads/documents/jmmdraft2015.pdf |
| Geographic Reach | National |
| Policy Influence Type | Citation in systematic reviews |
| URL | http://www.tbonline.info/media/uploads/documents/jmmdraft2015.pdf |
| Description | Polio immunisation plans |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.polioeradication.org |
| Description | PopART (citation in new WHO consolidated treatment and testing guidelines) - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://www1.imperial.ac.uk/departmentofmedicine/divisions/infectiousdiseases/infectious_diseases/hiv... |
| Description | Preparatory Meeting of the Global Fund Fifth Replenishment (2017-2019), 16-17 December 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Guideline Title | Conditions for use of long-lasting insecticidal nets treated with a pyrethroid and piperonyl butoxide |
| Description | Presentation to WHO Expert Review Group on Bednets - 2016 |
| Geographic Reach | Africa |
| Policy Influence Type | Citation in clinical guidelines |
| Impact | It is estimated that 68% of malaria deaths have been averted through use of bednets though there is increasing fear that the effectiveness of these nets is being reduced by the presence of mosquitoes resistant to insecticide. A new type of net is available that claims to overcome the problems of pyrethroid resistance but it much more expensive so it is unclear where and when control programmes should invest in this type of net. Our work was used to justify the current WHO policy for the use of these nets. |
| URL | http://www.who.int/malaria/publications/atoz/use-of-pbo-treated-llins-report-nov2015.pdf?ua=1 |
| Description | Providing direct technical support to Pakistan Ministry of Health and WHO |
| Geographic Reach | Asia |
| Policy Influence Type | Contribution to a national consultation/review |
| Impact | Working with WHO and government offices to offer risk assessment and campaign planning for polio eradication |
| Description | Provision of malaria vaccine public health impact scenarios to WHO and GAVI - 2013 |
| Geographic Reach | Africa |
| Policy Influence Type | Citation in other policy documents |
| Description | Publication of journal article on increase to TB burden. Influencing global numbers and strategy |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Contribution to a national consultation/review |
| Impact | Significant influence on global understanding of TB burden |
| URL | http://timesofindia.indiatimes.com/india/No-of-Indias-TB-patients-may-be-double-the-estimate-Lancet/... |
| Description | RCUK - Global Uncertainties |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Recommendation for the long-term vaccination strategy for YF informing SAGE decisions |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | Roundatable to discuss Bovine Tuberculosis with Michael Gove, MP Defra Secretary of State and George Eustice, MP Minister, Jan 2018 (Department of Environment Food and Rural Affairs) |
| Geographic Reach | National |
| Policy Influence Type | Contribution to a national consultation/review |
| Description | Scientific Committee for Advanced Data and Modelling - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Improved outbreak response policies for pandemic influenza. |
| URL | http://www.chp.gov.hk/en/sas2/101/110/108.html |
| Description | Seasonal Malaria Chemoprophylaxis (WHO policy document) AG |
| Geographic Reach | Africa |
| Policy Influence Type | Citation in other policy documents |
| Description | Serological Epidemiology of Influenza Steering Group - Health protection Agency |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Severity of influenza pandemics. To feed into WHO guidelines on influenza severity. |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| URL | http://www.who.int/influenza/en/ |
| Description | Sitting on the advisory committee of GORN. To inform and guide development of new tools for outbreak response |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | collaboration on tool development |
| Description | Source of scientific data on the impacts of badger culling CD |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | Sources of HIV transmission in The Netherlands |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Impact | Improved knowledge amongst professional practitioners about the sources of HIV transmission in The Netherlands, which subsequently led to improvements in treatment, access to care, survival, morbidity and quality of life for people living with HIV in The Netherlands |
| Description | Spi-M committee |
| Geographic Reach | National |
| Policy Influence Type | Membership of a guideline committee |
| Impact | contribution to government Spi-M panel |
| URL | https://www.gov.uk/government/groups/scientific-pandemic-influenza-subgroup-on-modelling |
| Description | Study made with PHE on allocation of pre-exposure prophylaxis for HIV |
| Geographic Reach | National |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Impact | Study made with PHE on allocation of pre-exposure prophylaxis for HIV |
| Description | Technical assistance to WHO for WHO documentation (e.g., Weekly Epidemiologic Record publications) MVK |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | Technical expertise on WHO led teleconferences for influenza, yellow fever, meningitis, and other pathogens |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | information not provided |
| Description | The International Decision Support Initiative (iDSI) supprted by Bill & Melinda Gates Foundation |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | Towards the Elimination of Hepatitis B and C by 2030. The draft WHO Global Hepatitis Strategy, 2016-2021 and global elimination targets. |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | Uptake of new molecular diagnostic tools for TB in India (2014) |
| Geographic Reach | National |
| Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
| Description | WHO - Malaria Interventions |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | WHO - Public Health Research Priority for Influenza |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | WHO - Technical Expert Group on Guideline Development |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Sought to influence the way WHO developed guidelines |
| Description | WHO Collaboration on Modelling Dengue Vaccines - Strategic Advisory Group of Experts (SAGE) - 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | WHO Consultation on data sharing during public health emergencies; later included in WHO Guidelines on data sharing -2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | WHO Consultations on 2013 HIV testing and treatment guidelines CF |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | WHO Ebola Response Group - 2014 |
| Geographic Reach | Africa |
| Policy Influence Type | Implementation circular/rapid advice/letter to e.g. Ministry of Health |
| Impact | Improvements in survival, morbidity or quality of life re Ebola. |
| URL | http://www.nejm.org/doi/full/10.1056/NEJMoa1411100?query=featured_home |
| Description | WHO Gave evidence to 7th Vector Control Advisory group - VCAG |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | WHO Gave evidence to the World Health Organisation Expert Review Group on "Conditions for use of long-lasting insecticidal nets treated with a pyrethroid and piperonyl butoxide" |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| URL | http://www.who.int/malaria/publications/atoz/use-of-pbo-treated-llins/en/#202017 |
| Description | WHO Global Technical Strategy for Malaria, 2016-2030 (2015) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Impact | http://www.who.int/malaria/areas/global_technical_strategy/en/; http://www.who.int/malaria/areas/global_technical_strategy/WHO_HTM_GMP_2014.11_eng.pdf?ua=1; |
| URL | http://www.who.int/malaria/areas/global_technical_strategy/en |
| Description | WHO Malaria Elimination Guidelines - 2014 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/newssummary/news_12-6-2014-18-17-49 |
| Description | WHO Policy Recommendation for the RTS,S malaria vaccine (2015) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://www.who.int/immunization/policy/position_papers/malaria/en |
| Description | WHO SAGE Polio - 2013 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | WHO and Wellcome Trust Joint Consultation on preparing for the next epidemic -2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| Description | WHO public health research agenda for Influenza. Speaker for the modelling stream of these guidelines |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | WHO recommnedations on 'Conditions for use of long-lasting insecticidal nets treated with a pyrethroid and piperonyl butoxide' (December 2015) |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| URL | http://www.who.int/malaria/publications/atoz/use-of-pbo-treated-llins-report-nov2015.pdf?ua=1 |
| Description | Work Foundation panel discussion on assessing work productivity of people working with HIV/AIDS. |
| Geographic Reach | Local/Municipal/Regional |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Impact | Economic |
| URL | http://theworkfoundation.com |
| Description | World Health Organisation Steering Committee for Global Malaria Technical Strategy - 2015 |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Membership of a guideline committee |
| URL | http://www.who.int/malaria/areas/global_technical_strategy/steering_committee/en |
| Description | Yes - Ebola outbreak response in DRC |
| Geographic Reach | National |
| Policy Influence Type | Membership of a guideline committee |
| Description | Zoonoses Workshop - Tanzania - Feb 2016 - 25 attendees including policy makers |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Influenced training of practitioners or researchers |
| Description | polio1 NG |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Citation in other policy documents |
| Description | polio2 NG |
| Geographic Reach | Multiple continents/international |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | the Bovine TB Science Review Group, Wales |
| Geographic Reach | Local/Municipal/Regional |
| Policy Influence Type | Contribution to a national consultation/review |
| Description | vCJD projections and modelling |
| Geographic Reach | National |
| Policy Influence Type | Participation in a guidance/advisory committee |
| Description | A genealogical approach to tracking bacterial transmission (Xavier Didelot) |
| Amount | £403,170 (GBP) |
| Funding ID | MR/N010760/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 05/2016 |
| End | 05/2019 |
| Description | AMZAC (Azithromycin for Seasonal Malaria Chemoprevention) (Lesong Conteh) |
| Amount | £146,860 (GBP) |
| Funding ID | ITDCZA2510 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2014 |
| End | 06/2017 |
| Description | An integrated approach to understand the emergence and spread of extensively resistant Gram-negative bacteria in China |
| Amount | £26,958 (GBP) |
| Funding ID | MR/P007597/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 07/2016 |
| End | 08/2019 |
| Description | Analytic and sequencing tools for poliovirus environmental surveillance |
| Amount | £554,669 (GBP) |
| Funding ID | OPP1171890 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 05/2017 |
| End | 05/2019 |
| Description | Assessing the impact of waning vaccine efficacy on malarial elimination using a population transmission model (Tom Churcher) |
| Amount | £61,597 (GBP) |
| Organisation | PATH |
| Department | PATH Malaria Vaccine Initiative |
| Sector | Charity/Non Profit |
| Country | Global |
| Start | 10/2016 |
| End | 11/2018 |
| Description | BBSRC: Analytical methodology to perform genome-wide association studies in bacteria (Xavier Didelot) |
| Amount | £170,226 (GBP) |
| Funding ID | BB/L023458/1 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2014 |
| End | 10/2016 |
| Description | BGMF: Mathematical modelling of poliovirus transmission to support the endgame |
| Amount | £487,817 (GBP) |
| Funding ID | OPP1099374 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 11/2013 |
| End | 04/2018 |
| Description | BGMF: Treat children in India for enteric infections to improve their response to oral poliovirus vaccine (expanded grant) |
| Amount | £1,890,389 (GBP) |
| Funding ID | OPP1039135 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 05/2012 |
| End | 03/2017 |
| Description | BMGF HIV Modelling Consortium |
| Amount | £2,080,207 (GBP) |
| Funding ID | OPP1022972 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 09/2010 |
| End | 09/2013 |
| Description | BMGF Malaria in Pregnancy (MiP) Consortium: Mathematical models to guide treatment and prevention strategies for P.falciparum malaria in pregnancy |
| Amount | £81,332 (GBP) |
| Funding ID | GATES FDN CONSORTIUM |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2010 |
| End | 10/2014 |
| Description | BMGF Project Grant: Vaccine Modelling Initiative (VMI) |
| Amount | £1,755,066 (GBP) |
| Funding ID | 705580-1 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 04/2008 |
| End | 10/2014 |
| Description | BMGF: Application of mathematical models to guide and evaluate malaria control and elimination programs |
| Amount | £2,539,445 (GBP) |
| Funding ID | OPP1068440 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 04/2013 |
| End | 12/2020 |
| Description | BMGF: Control of TB in India: developing analytical tools |
| Amount | £385,936 (GBP) |
| Funding ID | OPP1095710 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 11/2013 |
| End | 10/2018 |
| Description | BMGF: HIV Modelling Consortium (renewal 2013) |
| Amount | £3,522,615 (GBP) |
| Funding ID | OPP1084364 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 06/2013 |
| End | 07/2018 |
| Description | BMGF: Phylogenetics Networks to Address Transmission of HIV (PANGEA_HIV) |
| Amount | £226,449 (GBP) |
| Funding ID | OPP1084352 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2013 |
| End | 09/2017 |
| Description | BMGF: PreP - ARV-based HIV Prevention Technologies |
| Amount | £786,465 (GBP) |
| Funding ID | OPP1032254 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2011 |
| End | 10/2015 |
| Description | BMGF: The interaction between hormonal contraceptives and HIV risk |
| Amount | £331,798 (GBP) |
| Funding ID | OPP1067133 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2012 |
| End | 02/2015 |
| Description | BMGF: Treat children in India for enteric infections to improve their response to oral poliovirus vaccine |
| Amount | £61,482 (GBP) |
| Funding ID | OPP1036117 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 05/2011 |
| End | 10/2013 |
| Description | Building International Collaborations on the Mathematical Modelling of Emerging Infectious Disease Threats (Neil Ferguson) |
| Amount | £49,657 (GBP) |
| Funding ID | P11329/DF118 |
| Organisation | Imperial College London |
| Department | Imperial College Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 04/2008 |
| End | 12/2023 |
| Description | Building TRUST |
| Amount | £100,609 (GBP) |
| Funding ID | Sub Award No. 1800014 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 07/2015 |
| End | 06/2018 |
| Description | CAPS (Cooking and Pneumonia Study) (Lesong Conteh) |
| Amount | £24,526 (GBP) |
| Funding ID | MR/K006533/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2013 |
| End | 02/2017 |
| Description | CDC via Uni Mississippi Med Center: Applied research to address emerging public health priorities BAA FY2017-OADS-01 (Xavier Didelot) |
| Amount | £13,393 (GBP) |
| Funding ID | 66109970918 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Sector | Public |
| Country | United States |
| Start | 09/2017 |
| End | 09/2018 |
| Description | Cost-effectiveness systematic screening and treatment of pregnant women by CHW (Lesong Conteh) |
| Amount | £167,022 (GBP) |
| Funding ID | 305662 |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 09/2012 |
| End | 05/2017 |
| Description | DFID/MRC/Wellcome Trust Joint Global Health Trials Scheme |
| Amount | £179,101 (GBP) |
| Funding ID | RF020305 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2014 |
| End | 10/2018 |
| Description | DH: EMIT |
| Amount | £94,640 (GBP) |
| Funding ID | RGS:103272 |
| Organisation | Department of Health (DH) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2011 |
| End | 09/2014 |
| Description | DH: Effectiveness for Testing for and Treatment for Latent TB (HALT Study) |
| Amount | £210,090 (GBP) |
| Funding ID | 015/0306 |
| Organisation | Department of Health (DH) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2012 |
| End | 06/2017 |
| Description | DH: Improving communication with the public about antivirals and vaccination during the next pandemic |
| Amount | £89,147 (GBP) |
| Funding ID | N/A |
| Organisation | Government of the UK |
| Sector | Public |
| Country | United Kingdom |
| Start | 06/2013 |
| End | 08/2015 |
| Description | Defining disease importation and target interventions from routine surveillance data (Tom Churcher) |
| Amount | £81,703 (GBP) |
| Funding ID | OPP1161898 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 11/2016 |
| End | 04/2018 |
| Description | Defra: A study to examine the interactions between cattle and badgers. |
| Amount | £24,636 (GBP) |
| Funding ID | ZSL ref: N587 |
| Organisation | Department For Environment, Food And Rural Affairs (DEFRA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2012 |
| End | 03/2015 |
| Description | Defra: Ecological and epidemiological effects of small-scale badger culling. |
| Amount | £15,733 (GBP) |
| Funding ID | SE3272 |
| Organisation | Department For Environment, Food And Rural Affairs (DEFRA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2011 |
| End | 03/2013 |
| Description | Defra: Transmission modeling and cost-effectiveness analysis of cattle vaccination at a herd level |
| Amount | £481,855 (GBP) |
| Funding ID | SE3130 |
| Organisation | Department For Environment, Food And Rural Affairs (DEFRA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2011 |
| End | 07/2014 |
| Description | Develop a novel, cost-effective, surveillance approach for malaria elimination through existing antenatal care platform |
| Amount | £56,962 (GBP) |
| Funding ID | GAT.2162-01585030-SUB |
| Organisation | PATH |
| Sector | Charity/Non Profit |
| Country | Global |
| Start | 02/2018 |
| End | 08/2018 |
| Description | Diversity and Phenotype of Artemisinin Resistance Mutations in Central Africa (AZra Ghani) |
| Amount | £13,785 (GBP) |
| Funding ID | 5104760 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 06/2016 |
| End | 05/2018 |
| Description | Dorothy Hodgkin Fellowship - Lucy Okell (Modelling the control of artemisinin-based antimalarial drug resistance) |
| Amount | £355,171 (GBP) |
| Funding ID | N/A |
| Organisation | The Royal Society |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 01/2016 |
| End | 12/2020 |
| Description | EMPIRIE: European managment platform for emerging and re-emerging infectious diseases entities. |
| Amount | £890,687 (GBP) |
| Funding ID | 223498 |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 05/2009 |
| End | 04/2014 |
| Description | ERC: BEEHIVE (Bridging the Evolution and Epidemiology of HIV in Europe) |
| Amount | £2,261,061 (GBP) |
| Funding ID | 339251 |
| Organisation | European Research Council (ERC) |
| Sector | Public |
| Country | Belgium |
| Start | 04/2014 |
| End | 03/2019 |
| Description | EU FP7: PREHDICT: Health Economic Modelling of PREvention Strategies for HPV-related diseases in European Countries |
| Amount | £301,527 (GBP) |
| Funding ID | 242061 |
| Organisation | European Commission |
| Department | Seventh Framework Programme (FP7) |
| Sector | Public |
| Country | European Union (EU) |
| Start | 05/2010 |
| End | 04/2013 |
| Description | EU FP7:PREDEMICS |
| Amount | £780,182 (GBP) |
| Funding ID | 278433 |
| Organisation | European Commission |
| Department | Seventh Framework Programme (FP7) |
| Sector | Public |
| Country | European Union (EU) |
| Start | 11/2011 |
| End | 10/2016 |
| Description | EU: Building an Integrated Genetic infectious disease epidemilogy approach (transferred to UCL) |
| Amount | £80,930 (GBP) |
| Funding ID | 260801-BIG_IDEA |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 11/2010 |
| End | 12/2015 |
| Description | Epidemiological analysis and mathematical modelling of poliovirus elimination and endgame vaccination strategies |
| Amount | £56,616 (GBP) |
| Funding ID | 2017/769688-0 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 11/2017 |
| End | 12/2017 |
| Description | Epidemiology, evolution and control of infectious (AZra Ghani) |
| Amount | £200,400 (GBP) |
| Funding ID | 102169/B/13/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2017 |
| End | 09/2023 |
| Description | Epidemiology, evolution and control of infectious diseases |
| Amount | £2,004,000 (GBP) |
| Funding ID | 105169/B/13/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2017 |
| End | 09/2023 |
| Description | Epstein Barr Virus: Many questions, few answers |
| Amount | £2,800 (GBP) |
| Funding ID | 536857 |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 01/2018 |
| Description | Evolution, transmission and diversification patterns of group B streptococci - Elita Jauneikaite Fellowship |
| Amount | £125,000 (GBP) |
| Funding ID | M683 |
| Organisation | Rosetrees Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 11/2017 |
| End | 07/2023 |
| Description | Evolution, transmission and diversification patterns of group B streptococci - Elita Jauneikaite Fellowship |
| Amount | £125,000 (GBP) |
| Funding ID | M683 |
| Organisation | Stoneygate Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 11/2017 |
| End | 07/2023 |
| Description | Gates: Modelling the impact of diagnostics in global health: The BMGF Diagnostics Consortium |
| Amount | £403,372 (GBP) |
| Funding ID | OPP1095124 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2013 |
| End | 02/2015 |
| Description | Geospatial modelling for malaria risk stratification and intervention targeting (Sam Bhatt) |
| Amount | £219,507 (GBP) |
| Funding ID | 1606H5002/JH6 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 09/2016 |
| End | 08/2020 |
| Description | H99: IHI iSense internal funding. Digital Disease Detection. |
| Amount | £99,210 (GBP) |
| Funding ID | 161737 |
| Organisation | Engineering and Physical Sciences Research Council (EPSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 02/2016 |
| End | 04/2017 |
| Description | HC-HIV modeling activity |
| Amount | £156,940 (GBP) |
| Organisation | United States Agency for International Development |
| Sector | Public |
| Country | United States |
| Start | 06/2017 |
| End | 06/2018 |
| Description | HIV Prevention Trials Network (HPTN) |
| Amount | $784,089 (USD) |
| Funding ID | UM1 AI068619 |
| Organisation | Family Health International |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 03/2015 |
| End | 11/2018 |
| Description | HMJF: Influenza severity in the US military/CONSISE |
| Amount | £125,923 (GBP) |
| Funding ID | Contract No. 775696 |
| Organisation | Henry M. Jackson Foundation for the Advancement of Military Medicine (HJF) |
| Sector | Academic/University |
| Country | United States |
| Start | 01/2013 |
| End | 09/2013 |
| Description | HPA: Evaluation of the TB Find and Treat Project |
| Amount | £129,932 (GBP) |
| Funding ID | DoH via HPA |
| Organisation | Department of Health (DH) |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2010 |
| End | 07/2017 |
| Description | Health economics of MDR TB testing in the UK - 2013 |
| Amount | £48,496 (GBP) |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2012 |
| End | 12/2013 |
| Description | IVCC (Liverpool School of Tropical Medicine and Hygiene) |
| Amount | £166,330 (GBP) |
| Organisation | Liverpool School of Tropical Medicine |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 08/2017 |
| Description | Identification of factors promoting the emergence of pathogens with human pandemic potential with zoonotic background and related prevention strategies |
| Amount | £759,182 (GBP) |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 11/2011 |
| End | 04/2017 |
| Description | Impact of maternally derived antibodies and microbiota on the immunogenicity of rotavirus vaccines in African, Indian and European infants |
| Amount | £204,213 (GBP) |
| Funding ID | JXR11990 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 07/2015 |
| End | 07/2018 |
| Description | Imperial College Global Health Fellowship Scheme: Integration of Communicable and Infectious Disease Health Care in South Africa (Berkowitz, Natasha) |
| Amount | £70,409 (GBP) |
| Funding ID | 105603/Z/14/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 09/2016 |
| End | 08/2017 |
| Description | Imperial College Global HealthClinical Fellowship Scheme: Understanding HIV Epidemics, Disease Progression and Interventions towards Marginalised (Kyaw Min, Soe) |
| Amount | £58,967 (GBP) |
| Funding ID | 204834/Z/16/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 07/2017 |
| End | 06/2018 |
| Description | Imperial College JRF: The effects of mass drug administration on Schistosoma population dynamics (Poppy Lamberton) |
| Amount | £180,000 (GBP) |
| Organisation | Imperial College London |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 12/2012 |
| End | 11/2015 |
| Description | Improving Delivery of HIV Prevention and Treatment through Implementation Science and Translational Research (R01) |
| Amount | $754,023 (USD) |
| Funding ID | 1R01AI120913-01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 07/2015 |
| End | 06/2016 |
| Description | Improving the efficacy of malaria prevention in an insecticide resistant Africa (Tom Churcher) |
| Amount | £162,798 (GBP) |
| Funding ID | 200222/B/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 05/2016 |
| End | 04/2019 |
| Description | Juior Research Fellowship - Hannah Slater (Modelling the spatial heterogeneity of malaria transmission and the impact of spatially targetted interventions to eliminate malaria) |
| Amount | £142,150 (GBP) |
| Organisation | Imperial College London |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 09/2019 |
| Description | Junior Research Fellowship - Ilaria Dorigatti (Within-host dynamics of dengue virus pathogenesis and the human antibody response) |
| Amount | £150,510 (GBP) |
| Organisation | Imperial College London |
| Sector | Academic/University |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 09/2018 |
| Description | Junior Research Fellowship - Rafal Mostowy (Understanding the contribution of horizontal exchange of genes to the evolution of antigenic diverity in bacteria) |
| Amount | £139,790 (GBP) |
| Organisation | Imperial College London |
| Department | Imperial College Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2016 |
| End | 09/2019 |
| Description | Laboratory Refurbishment Award |
| Amount | £249,139 (GBP) |
| Organisation | The Royal Society |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2017 |
| End | 12/2017 |
| Description | MIDAS 2: Models for synthesising molecular, clinical and epidemiological data, and translation to public health response (NIH) |
| Amount | £1,246,328 (GBP) |
| Funding ID | 1U01GM110721-01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 09/2014 |
| End | 05/2019 |
| Description | MIDAS Project with UC San Diego AntiViral Research Center (AVRC) |
| Amount | £38,355 (GBP) |
| Funding ID | 58214101 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 05/2014 |
| End | 05/2016 |
| Description | MIDAS: Modelling Epidemic Infectious Diseases Using Sequence Analysis (Erik Volz) |
| Amount | £184,667 (GBP) |
| Funding ID | 258162IMP |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 01/2016 |
| End | 05/2019 |
| Description | MMV: Modeling of different potential implementations of existing ACTs and other anti-malarial products in development." |
| Amount | £316,782 (GBP) |
| Funding ID | MMV AD-12-1400-03 |
| Organisation | Medicines for Malaria Venture (MMV) |
| Sector | Charity/Non Profit |
| Country | Switzerland |
| Start | 10/2013 |
| End | 09/2016 |
| Description | MRC Centre Grant: Centre for Outbreak Analysis and Modelling |
| Amount | £1,933,493 (GBP) |
| Funding ID | G0600719 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2008 |
| End | 03/2013 |
| Description | MRC Centre Grant: Centre for Outbreak Analysis and Modelling (Renewal) |
| Amount | £2,092,163 (GBP) |
| Funding ID | MR/K010174/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2013 |
| End | 03/2018 |
| Description | MRC Centre Grant: Centre for Outbreak Analysis and Modelling - equipment supplement |
| Amount | £141,000 (GBP) |
| Funding ID | MR/K010174/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 03/2015 |
| Description | MRC Centre Renewal - Equipment Sub # 2 |
| Amount | £100,000 (GBP) |
| Funding ID | MR/K010174/1B |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2013 |
| End | 03/2018 |
| Description | MRC Fellowship - Bob Verity (Genetic data as a signal of changing malaria transmission) |
| Amount | £281,370 (GBP) |
| Funding ID | MR/N01507X/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2016 |
| End | 03/2019 |
| Description | MRC Fellowship - Michael White (Modelling the contribution of relapse infections to the epidemiology and control of Plasmodium vivax malaria) |
| Amount | £300,098 (GBP) |
| Funding ID | MR/L012170/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2014 |
| End | 02/2017 |
| Description | MRC Fellowship - Patrick Walker (Understanding trends towards malaria elimination in Western Kenya) |
| Amount | £299,834 (GBP) |
| Funding ID | MR/L012189/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 03/2017 |
| Description | MRC Fellowship: Assessing the impact of HIV-1 in the black Caribbean community in south London |
| Amount | £368,031 (GBP) |
| Funding ID | G0802431/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2009 |
| End | 09/2013 |
| Description | MRC Fellowship: Optimal trial design for a release of malaria-refractory transgenic mosquitoes (John Marshall) |
| Amount | £285,102 (GBP) |
| Funding ID | MR/J012254/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2012 |
| End | 09/2015 |
| Description | MRC Fellowship: Spatio-temporal dynamics of drug-resistant Plasmodium falciparum malaria in Africa: implications for public health (Lucy Okell) |
| Amount | £305,791 (GBP) |
| Funding ID | G1002387 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2011 |
| End | 09/2015 |
| Description | MRC Fellowship: Synthesising data from multiple spatial scales and levels of detail to improve malaria transmission model predictions (Jamie Griffin) |
| Amount | £418,907 (GBP) |
| Funding ID | G1002284 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2011 |
| End | 09/2015 |
| Description | MRC Methodology Fellowship K O'Reilly - 2013 (Development of statistical modelling framework to inform real-time immunization strategies for elimination of poliomyelitis and other diseases) |
| Amount | £407,785 (GBP) |
| Funding ID | MR/J014362/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2012 |
| End | 09/2016 |
| Description | MRC Methodology Fellowship: Understanding the spatial dynamics of poliomyelitis and improved planning and mass vaccination campaigns. |
| Amount | £407,784 (GBP) |
| Funding ID | MR/J14362/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2012 |
| End | 09/2016 |
| Description | MRC Population Health Science Fellowship: Evaluation of Interventions and Diagnostics of Neglected tropical Diseases in sub-Saharan Africa |
| Amount | £326,242 (GBP) |
| Funding ID | G0902130 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2010 |
| End | 08/2013 |
| Description | MRC Supplement to MRC Centre Award: A continental-scale simulator for modelling malaria eradication strategies |
| Amount | £280,558 (GBP) |
| Funding ID | G0600719 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2009 |
| End | 03/2013 |
| Description | MRC fellowship JM - 2013 |
| Amount | £285,102 (GBP) |
| Funding ID | MR/J012254/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2012 |
| End | 09/2015 |
| Description | MRC: Centre for Outbreak Analysis and Modelling - studentships |
| Amount | £360,512 (GBP) |
| Funding ID | 1U54GM088491-01 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2013 |
| End | 03/2019 |
| Description | MRC: Understanding herd immunity and incidence variation for rapidly evolving pathogens: influenza in England and Wales, 1986 to 2009 |
| Amount | £839,354 (GBP) |
| Funding ID | MR/J008761/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2013 |
| End | 05/2017 |
| Description | Mapping the risk of international infectious disease spread |
| Amount | £111,089 (GBP) |
| Funding ID | AID-OAA-F-16-00115 |
| Organisation | United States Agency for International Development |
| Sector | Public |
| Country | United States |
| Start | 10/2016 |
| End | 06/2018 |
| Description | Marie Curie Fellowship - Francois Blanquart (Predicting the evolution of resistance in streptococcus pneumoniae - H2020) |
| Amount | £144,781 (GBP) |
| Funding ID | 657768 |
| Organisation | Marie Curie |
| Department | Marie Curie Research Institute |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 05/2017 |
| Description | Marie Curie Fellowship - Rafal Mostowy (The role of recombination in the evolution and epidemiology of the bacterial pathogen streptoccus pneumoniae) |
| Amount | £164,152 (GBP) |
| Funding ID | 329515 |
| Organisation | European Commission |
| Sector | Public |
| Country | European Union (EU) |
| Start | 04/2013 |
| End | 03/2015 |
| Description | Maternal Flu Immunisation CRA |
| Amount | £7,004 (GBP) |
| Funding ID | EPIDZC14 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 10/2013 |
| End | 08/2014 |
| Description | Maximising the public health impact of new approaches to control malaria in pregnancy through the translation of evidence-based global policies to country level policies and plans. |
| Amount | £42,075 (GBP) |
| Funding ID | CSA-2014-276 |
| Organisation | Sixth Framework Programme (FP6) |
| Department | European and Developing Countries Clinical Trials Partnership |
| Sector | Public |
| Country | Netherlands |
| Start | 01/2016 |
| End | 12/2018 |
| Description | Modeling to Understand the Epidemiological Impact and Market Impact of Harmonized Regimens for MDR-TB |
| Amount | £30,828 (GBP) |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 07/2014 |
| End | 03/2016 |
| Description | Modelling antimalarial target product profiles for reducing P. falciparum malaria transmission |
| Amount | £316,782 (GBP) |
| Funding ID | PO14/00561 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2013 |
| End | 02/2019 |
| Description | Modelling malaria transmission and control in the Democratic Republic of Congo (NIH-UNC) |
| Amount | £198,334 (GBP) |
| Funding ID | 5101262 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 04/2015 |
| End | 03/2019 |
| Description | Modelling the incremental value of alternative strategies to IPT for malaria in pregnancy |
| Amount | £38,527 (GBP) |
| Organisation | Jhpiego |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 01/2015 |
| End | 08/2015 |
| Description | Modelling the potential impact of intermittent preventive treatment of malaria in pregnancy on antimalarial drug resistance |
| Amount | £99,998 (GBP) |
| Organisation | Royal Society of Medicine |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 12/2016 |
| End | 08/2018 |
| Description | Multidisciplinary Studies of HIV/AIDS and Aging (R21) |
| Amount | £205,531 (GBP) |
| Funding ID | 1R21AG053093 - 01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 09/2016 |
| End | 04/2019 |
| Description | NIH MIDAS Initiative: Mathematical Models in the study of Infectious Disease spread and control (2009-14) |
| Amount | £768,126 (GBP) |
| Funding ID | 1U54GM088491-01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 07/2009 |
| End | 06/2014 |
| Description | NIH NIAD: New methods for the design and evaluation of large HIV prevention interventions |
| Amount | £111,000 (GBP) |
| Funding ID | 1R01AI112339-01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 06/2014 |
| End | 05/2018 |
| Description | NIH: Genetic epidemiology of malaria in the Democratic Republic of Congo |
| Amount | £300,000 (GBP) |
| Funding ID | 1R01AI107949-01A1 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 04/2015 |
| End | 03/2016 |
| Description | NIH: Methodologies and Formative Work for Combination HIV Prevention Approaches |
| Amount | £117,604 (GBP) |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 07/2014 |
| End | 02/2017 |
| Description | NIH: PopART-Phylogenetics |
| Amount | £83,044 (GBP) |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 06/2013 |
| End | 11/2018 |
| Description | NIH: PopART: Cluster randomized trial of the impact of a combination HIV prevention |
| Amount | £1,531,054 (GBP) |
| Funding ID | HPTN 071 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 10/2011 |
| End | 11/2018 |
| Description | NIH: Targeting Primary Infection with Antiretrovirals to Prevent Transmission |
| Amount | £165,096 (GBP) |
| Funding ID | 1R01 AI083059-01 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 08/2009 |
| End | 07/2014 |
| Description | NIH: The immune landscape of human influenza in households, towns and cities in southern China |
| Amount | £212,974 (GBP) |
| Funding ID | 5R01TW008246-04 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 01/2011 |
| End | 08/2015 |
| Description | NIHR - Senior Investigators Award (budget uplift) |
| Amount | £45,000 (GBP) |
| Funding ID | P/O 427921 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 04/2018 |
| Description | NIHR HTA: The cost effectiveness of genetic markers for antibiotic resistance in tuberculosis. |
| Amount | £48,496 (GBP) |
| Funding ID | 10/96/01 |
| Organisation | National Institute for Health Research |
| Department | Health Technology Assessment Programme (HTA) |
| Sector | Public |
| Country | United Kingdom |
| Start | 10/2011 |
| End | 12/2013 |
| Description | NIHR Senior Investigator Award |
| Amount | £120,000 (GBP) |
| Funding ID | P/O 427921 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2009 |
| End | 04/2021 |
| Description | NIHR: HPRU in Respiratory Infections at Imperial College London |
| Amount | £14,021 (GBP) |
| Funding ID | WHRR_P47123 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 03/2019 |
| Description | NIHR: Interferon gamma tests for the rapid identification of active tuberculosis disease |
| Amount | £79,228 (GBP) |
| Funding ID | 08/106/02 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2011 |
| End | 02/2015 |
| Description | NIHR: NIHR HPRU in Modelling Methodology |
| Amount | £4,234,300 (GBP) |
| Funding ID | HPRU-2012-10080 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2014 |
| End | 03/2020 |
| Description | NIHR: TB Reach: Improving the management and control of tuberculosis among hard to reach groups |
| Amount | £100,000 (GBP) |
| Funding ID | RP-PG-0407-10340 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 09/2008 |
| End | 08/2013 |
| Description | NIHR: Targeting men for better sexual health: The Ballseye Programme |
| Amount | £73,171 (GBP) |
| Funding ID | RP-PG-0707-10208 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 02/2009 |
| End | 02/2014 |
| Description | NIHR: Validation of new technologies for diagnosis and treatment evaluation of tuberculosis |
| Amount | £49,000 (GBP) |
| Funding ID | 12/65/27 |
| Organisation | National Institute for Health Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2014 |
| End | 06/2018 |
| Description | Near-Infrared Spectroscopy: A One-Stop-Shop for Mosquito Epidemiological Monitoring (Tom Churcher) |
| Amount | £643,883 (GBP) |
| Funding ID | MR/P01111X/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 03/2017 |
| End | 02/2020 |
| Description | Optimal spatial scales for deployment of multiple first line therapies for malaria |
| Amount | £105,750 (GBP) |
| Funding ID | RGF\EA\180225 |
| Organisation | Royal Society of Medicine |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 12/2017 |
| End | 03/2021 |
| Description | PATH/MVI/Gates: Modelling the public health impact and cost-effectiveness of the RTS,S malaria vaccine in malaria endemic countries |
| Amount | £302,135 (GBP) |
| Funding ID | GAT.0888-07-06258-CRT |
| Organisation | Program for Appropriate Technology in Health (PATH) |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 06/2013 |
| End | 12/2018 |
| Description | PATH/MVI: Measuring the population efficacy of TBIs - the Transmission Population Assay |
| Amount | £1,010,322 (GBP) |
| Funding ID | GAT.0888-11-06546-COL |
| Organisation | Program for Appropriate Technology in Health (PATH) |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2013 |
| End | 07/2016 |
| Description | Pathfinder: Experimental Human Challenge with Genetically Modified Commensals to Investigate Respiratory Tract Mucosal Immunity and Colonisation (Xavier Didelot) |
| Amount | £18,598 (GBP) |
| Funding ID | MR/N026993/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2017 |
| End | 07/2020 |
| Description | Phase variable epigenetic regulation in Firmicutes (Nick Croucher) |
| Amount | £298,700 (GBP) |
| Funding ID | RM33G0360 |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 01/2016 |
| End | 12/2018 |
| Description | Population Effects of Antretroviral Therapy to Reduce HIV Transmission (PopART) - Health Economics |
| Amount | £13,115 (GBP) |
| Organisation | Government of the UK |
| Department | Department for International Development (DfID) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2015 |
| End | 07/2018 |
| Description | Population Effects of Antretroviral Therapy to Reduce HIV Transmission (PopART) - Health Economics |
| Amount | £451,028 (GBP) |
| Funding ID | PO15001410 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 06/2015 |
| End | 05/2018 |
| Description | Predicting the impact of insecticide resistance and new paradigms of vector control (Tom Churcher) |
| Amount | £161,331 (GBP) |
| Organisation | IVCC |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 02/2018 |
| Description | Providing academic leadership through a Secretariat for the UNAIDS reference group on estimates modelling & projections |
| Amount | £222,968 (GBP) |
| Funding ID | EIP/DFA/PG/ca12/18 |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Sector | Public |
| Country | Global |
| Start | 01/2013 |
| End | 12/2014 |
| Description | Providing academic leadership through a Secretariat for the UNAIDS reference group on estimates modelling & projections |
| Amount | £634,543 (GBP) |
| Funding ID | PO201153562 |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Sector | Public |
| Country | Global |
| Start | 01/2015 |
| End | 12/2017 |
| Description | Providing academic leadership through a Secretariat for the UNAIDS reference group on estimates modelling & projections (2018-2019) |
| Amount | £468,709 (GBP) |
| Funding ID | 2017/778519 |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Sector | Public |
| Country | Global |
| Start | 01/2018 |
| End | 12/2019 |
| Description | Quantifying and preparing for the non-communicable disease burden in the ageing HIV-positive population in Kenya |
| Amount | £134,891 (GBP) |
| Funding ID | OISE-17-62962-1 |
| Organisation | United States President's Emergency Plan for AIDS Relief |
| Sector | Public |
| Country | United States |
| Start | 08/2017 |
| End | 09/2018 |
| Description | Quantifying future clinical burden of an ageing HIV-positive patient population: a modelling analysis for the USA and Italy |
| Amount | £110,000 (GBP) |
| Funding ID | 212011616 |
| Organisation | Gilead Sciences, Inc. |
| Sector | Private |
| Country | United States |
| Start | 05/2016 |
| End | 12/2016 |
| Description | RO1 - Statistical Models for Estimating and Projecting HIV/AIDS Epidemics (Jeff Eaton) |
| Amount | £11,080 (GBP) |
| Funding ID | 5776-ICS-DHHS-6664 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 09/2017 |
| End | 08/2018 |
| Description | Research Project Grant (R01) PA-07-070 |
| Amount | $122,980 (USD) |
| Organisation | National Institute of Allergy and Infectious Diseases (NIAID) |
| Sector | Public |
| Country | United States |
| Start | 09/2015 |
| End | 02/2016 |
| Description | Research and Development of Reconstructing HIV Epidemics from HIV Phylogenetics |
| Amount | £54,832 (GBP) |
| Funding ID | 340798 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 09/2015 |
| End | 02/2018 |
| Description | RooPfs (Can improved housing provide additional protection against clinical malaria over current practice? A household-randomised controlled trial) (Lesong Conteh) |
| Amount | £179,101 (GBP) |
| Funding ID | MR/M007383/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2014 |
| End | 10/2018 |
| Description | Royal Society University Research Fellowship: Mathematical Modelling of Human Contact Networks and Implications for Infectious Disease |
| Amount | £670,090 (GBP) |
| Funding ID | 516002.K5789/KK UF041279 |
| Organisation | Royal Society of Medicine |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2004 |
| End | 03/2013 |
| Description | Rush Foundation: Understanding Health Externalities in HIV Intervention To Inform Budget Allocation in Africa |
| Amount | £444,000 (GBP) |
| Organisation | Rush Foundation |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 08/2013 |
| End | 07/2016 |
| Description | Secretariat of the UNAIDS Reference Group on Estimates, Modelling, and Projections |
| Amount | $559,766 (USD) |
| Funding ID | SIE/SIM/PG/MM/ca/14/20 |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Sector | Public |
| Country | Global |
| Start | 01/2015 |
| End | 12/2016 |
| Description | Sir Henry Dale Fellowship - Nick Croucher (Evolutionary dynamics underlying pneumococcal genomic diversity) |
| Amount | £708,513 (GBP) |
| Funding ID | 104169/Z/14/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2014 |
| End | 09/2019 |
| Description | Sir Henry Wellcome Fellowship. Modelling the impact of HSV-2 interventions on HIV transmission in sub-Saharan Africa. |
| Amount | £245,383 (GBP) |
| Funding ID | WT082623 |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 01/2008 |
| End | 02/2013 |
| Description | Spatial Uncertainty: Data, Modeling, and Communication (R03) (Jeff Eaton) |
| Amount | £73,697 (GBP) |
| Funding ID | 1R03AI125001-01A1 |
| Organisation | National Institutes of Health (NIH) |
| Sector | Public |
| Country | United States |
| Start | 12/2016 |
| End | 11/2018 |
| Description | Statistical model for SMFA precision (Tom Churcher) |
| Amount | £76,406 (GBP) |
| Funding ID | R0002102 MVI-SMFA |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 03/2014 |
| End | 12/2015 |
| Description | Target Malaria - Controlling the mosquito vectors of malaria with engineered endonucleases |
| Amount | £238,798 (GBP) |
| Funding ID | OPP1141988 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 08/2016 |
| End | 05/2020 |
| Description | The Cost-Effectiveness of Pre-Exposure Prophylaxis (PrEP) Treatment for HIV |
| Amount | £177,479 (GBP) |
| Organisation | Viiv Healthcare |
| Sector | Private |
| Country | United Kingdom |
| Start | 06/2015 |
| End | 05/2016 |
| Description | The Interaction Between Hormonal Contraceptives and HIV Risk |
| Amount | £719,972 (GBP) |
| Funding ID | OPP1067133 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2012 |
| End | 02/2017 |
| Description | The delay-care cascade and its implications for TB transmission: a study in three country settings (Nim Pathy) |
| Amount | £70,160 (GBP) |
| Funding ID | STBP/USAID/GSA/92954/2017-21 |
| Organisation | United Nations Office for Project Services |
| Sector | Public |
| Country | United States |
| Start | 08/2017 |
| End | 02/2018 |
| Description | The evolution of influenza virus; Studies of within host and between host evolution to improve pandemic risk assessment and vaccine updates |
| Amount | £165,459 (GBP) |
| Funding ID | 200187/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 04/2016 |
| End | 03/2020 |
| Description | The global burden of Chikungunya virus |
| Amount | £290,652 (GBP) |
| Funding ID | MR/R024855/1 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 11/2017 |
| End | 11/2020 |
| Description | The life course of human immune responses to influenza infection and vaccination |
| Amount | £1,882,747 (GBP) |
| Funding ID | 200861/Z/16/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 05/2016 |
| End | 04/2021 |
| Description | UNAIDS: Providing academic leadership through a Secretariat for the UNAIDS reference group on estimates modelling & projections (extension) |
| Amount | £222,968 (GBP) |
| Funding ID | EIP/DFA/PG/ca12/18 |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Sector | Public |
| Country | Global |
| Start | 01/2013 |
| End | 12/2014 |
| Description | Understanding Assays Used to Measure Malaria Transmission-Blocking Activity: Bridging Data Between the Laboratory and the Field |
| Amount | £79,079 (GBP) |
| Funding ID | IRD 304549/00 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 12/2013 |
| End | 07/2016 |
| Description | Vaccine Impact Modelling Consortium (VIMC) - Secretariat |
| Amount | £4,364,371 (GBP) |
| Funding ID | OPP1157270 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 12/2016 |
| End | 10/2022 |
| Description | Vaccine Impact Modelling Consortium (VIMC) - Sub-contracts |
| Amount | £4,788,528 (GBP) |
| Funding ID | PO008511 |
| Organisation | Bill and Melinda Gates Foundation |
| Department | Global Alliance for Vaccination and Immunisation (GAVI) |
| Sector | Charity/Non Profit |
| Country | Switzerland |
| Start | 01/2017 |
| End | 08/2022 |
| Description | WHO Guidelines ARV Revision 2015 |
| Amount | £15,587 (GBP) |
| Funding ID | 2015/523611-0 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 01/2015 |
| End | 09/2016 |
| Description | WHO: Developing a model of the impact of artemisinin resistance |
| Amount | £27,990 (GBP) |
| Funding ID | PO 200833521 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 01/2013 |
| End | 12/2013 |
| Description | WHO: Economic appraisals of seasonal influenza vaccine in low & middle income countries (LMIC) - Work Package 3 |
| Amount | £7,000 (GBP) |
| Funding ID | EPIDZC14 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 10/2013 |
| End | 08/2014 |
| Description | WHO: Gut mucosal immunity induced by vaccine and wild-type poliovirus in India |
| Amount | £99,091 (GBP) |
| Funding ID | PO 200245063 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 08/2010 |
| End | 08/2013 |
| Description | WHO: HIV Modelling Consortium WHO Guidelines - 2013 |
| Amount | £62,836 (GBP) |
| Funding ID | HIV/SIP |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 10/2012 |
| End | 01/2013 |
| Description | WHO: Statistical and mathematical analysis of polio surveillance data to support the endgame |
| Amount | £218,091 (GBP) |
| Funding ID | 200953530 |
| Organisation | World Health Organization (WHO) |
| Sector | Public |
| Country | Global |
| Start | 03/2014 |
| End | 12/2016 |
| Description | Wellcome Trust Collaborative Award |
| Amount | £165,459 (GBP) |
| Funding ID | 200187/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 02/2016 |
| End | 01/2020 |
| Description | Wellcome Trust Fellowship - Epidemiology and evolution of pathogenic human enteroviruses - Margarita Pons Salort |
| Amount | £250,000 (GBP) |
| Funding ID | 106073/Z/14/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2015 |
| End | 02/2019 |
| Description | Wellcome Trust Fellowship: Merging theory and field studies for infectious disease dynamics |
| Amount | £581,029 (GBP) |
| Funding ID | 093488/Z/10/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2011 |
| End | 05/2016 |
| Description | Wellcome Trust Fellowship: The effect of population structure on the evolution and progression of infectious disease |
| Amount | £264,829 (GBP) |
| Funding ID | 091737/Z/10/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 11/2011 |
| End | 01/2016 |
| Description | Wellcome Trust Fellowship: Uncovering Determinants of eco-evo Pathogen Dynamics with ABCì. |
| Amount | £250,000 (GBP) |
| Funding ID | 092311/Z/10/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2010 |
| End | 09/2014 |
| Description | Wellcome Trust Four-Year PhD Studentship - Miss Isobel Routledge |
| Amount | £165,784 (GBP) |
| Funding ID | 109310/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 09/2019 |
| Description | Wellcome Trust Four-Year PhD Studentship - Mr Finlay Campbell |
| Amount | £165,784 (GBP) |
| Funding ID | 109159/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 09/2019 |
| Description | Wellcome Trust Four-Year PhD Studentship - Mr Oliver J Watson |
| Amount | £165,784 (GBP) |
| Funding ID | 109312/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 09/2019 |
| Description | Wellcome Trust Four-Year PhD Studentship - Mr Robin Maximillian Schaefer |
| Amount | £165,784 (GBP) |
| Funding ID | 109313/Z/15/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2015 |
| End | 09/2019 |
| Description | Wellcome Trust PhD Programme for Clinicians Fellowship for Bhargavi Rao: Artemisinin combination therapy and the health system |
| Amount | £245,728 (GBP) |
| Funding ID | 090791/Z/09/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2010 |
| End | 08/2013 |
| Description | Wellcome Trust: Studentship for Marcus Shepheard |
| Amount | £145,130 (GBP) |
| Funding ID | 083705/Z/07/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 10/2007 |
| End | 07/2014 |
| Description | World Bank: Investigating reasons for epidemiological changes in HIV in African countries |
| Amount | £462,124 (GBP) |
| Funding ID | 7164102 |
| Organisation | World Bank Group |
| Sector | Public |
| Country | United States |
| Start | 08/2012 |
| End | 06/2016 |
| Description | Yellow Fever - Impact of immunisation in Africa |
| Amount | £117,089 (GBP) |
| Funding ID | OPP1117543 |
| Organisation | Bill and Melinda Gates Foundation |
| Sector | Charity/Non Profit |
| Country | United States |
| Start | 10/2014 |
| End | 12/2016 |
| Description | Zika in Columbia: early characterisation of epidemiological potential |
| Amount | £149,824 (GBP) |
| Funding ID | MC_PC_15091 |
| Organisation | Medical Research Council (MRC) |
| Sector | Public |
| Country | United Kingdom |
| Start | 04/2016 |
| End | 09/2017 |
| Description | Zika: A fast new intervention and an innovative method of evaluation (Tom Churcher) |
| Amount | £34,518 (GBP) |
| Funding ID | WPIA_P66851 |
| Organisation | QIMR Berghofer Medical Research Institute |
| Sector | Academic/University |
| Country | Australia |
| Start | 10/2016 |
| End | 12/2019 |
| Title | Platform RECON Learn |
| Description | Website for online training (RECON Learn) |
| Type Of Material | Improvements to research infrastructure |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Used in training |
| URL | https://reconlearn.netlify.com/ |
| Title | Climate data dataset |
| Description | Global climate data , different geographic resolutions to be used to inform models of dengue and other vector-borne diseases |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Feeding into the dengue model, used to produce global risk maps of dengue infection |
| Title | Colombia - Chagas Costs (Colombia Chagas individual level provider treatment costs) |
| Description | The dataset comprises information of medical visits and costs of 7164 individuals with diagnosis of Chagas disease in Colombia between 2010-2014. The data was obtained from the Individual Registers for Health Services in Colombia at the Ministry of Health and integrated with four different dictionaries and algorithms to classify the stages of the disease and trajectories of care for this population. |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | No impact yet. Will be part of a publication and costs & CE eventually reported back to Colombian MoH. |
| Title | Colombia - Chagas Costs- Colombia Chagas individual level provider treatment costs |
| Description | The dataset comprises information of medical visits and costs of 7164 individuals with diagnosis of Chagas disease in Colombia between 2010-2014. The data was obtained from the Individual Registers for Health Services in Colombia at the Ministry of Health and integrated with four different dictionaries and algorithms to classify the stages of the disease and trajectories of care for this population. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | No |
| Impact | No impact yet (Will be part of a publication and costs & CE eventually reported back to Colombian MoH) |
| Title | Database from a systematic review on different diagnostics on malaria - 2015 |
| Description | Comparison of diagnostics for the detection of asymptomatic Plasmodium falciparum infections to inform control and elimination strategies. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | PMID: 26633770 |
| Title | Dataset from the EVI study |
| Description | Dataset on the correlates of immunogenicity for oral poliovaccines |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Ability to predict vaccine response and effectiveness |
| Title | Discriminant Analysis of Principal Components (DAPC) |
| Description | a multivariate method designed to identify and describe clusters of genetically related individuals. When group priors are lacking, DAPC uses sequential K-means and model selection to infer genetic clusters. Our approach allows extracting rich information from genetic data, providing assignment of individuals to groups, a visual assessment of between-population differentiation, and contribution of individual alleles to population structuring. |
| Type Of Material | Data handling & control |
| Year Produced | 2010 |
| Provided To Others? | Yes |
| Impact | most highly accessed paper in BMC Genetics since its publication 6 weeks ago |
| Title | Ebola data analysis tools -2015 |
| Description | Wide range of statistical and modelling methods for the analysis of Ebola and other infectious disease outbreaks |
| Type Of Material | Data analysis technique |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | PMID: 25539446, 26029377 |
| Title | Estimating local chlamydia incidence and prevalence using surveillance data |
| Description | Synthesizes local surveillance data on rates of chlamydia testing and diagnosis with information on natural history |
| Type Of Material | Data analysis technique |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | Corresponding publication in press |
| Title | Estimating the reproduction number in real time CF |
| Description | Estimating the reproduction number in real time. Excel package and R package. Computer packages that will allow non-specialist to better analyse outbreaks |
| Type Of Material | Data analysis technique |
| Provided To Others? | No |
| Impact | Ready to be released, will be released with paper which is under review. Has been piloted during our 2 week short course, was very enthusiastically received |
| Title | Estimation of clearance rate of chlamydia |
| Description | synthesises data on rates of chlamydia clearance with different time-points to infer rates of clearance with greater precision |
| Type Of Material | Data analysis technique |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Corresponding publication in press |
| URL | https://github.com/joanna-lewis/ct_clearance |
| Title | Exploration of the power of routine surveillance data to assess the impacts of industry-led badger culling on bovine tuberculosis incidence in cattle herds - 2015 |
| Description | How to assess the statistical power of testing for effects of badger culling |
| Type Of Material | Data analysis technique |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | PMID: 26374782 |
| Title | FluScape Project data set - 2015 |
| Description | The Fluscape cohort is a longitudinal cohort that looks at influenza infection in a detailed manner and pairs this with information on social contacts. By working on a fine geographical scale in a randomly selected communities with characterized contact patterns and immune profile, the Fluscape cohort attempts to relate the infection risk of individuals to their social contact patterns and to the connectivity of the community in which they live. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | Several publications and ongoing work |
| Title | Forecasting incidence |
| Description | Null model to predict future incidence |
| Type Of Material | Data analysis technique |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Ability to produce better forecast data |
| Title | From malaria control to malaria elimination: a manual for elimination scenario planning - 2014 |
| Description | Computer software to evaluate the potential impact of malaria interventions in African countries |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | The tool has been formally released as part of a WHO guidance document. It was applied in Rwanda in September 2014 as part of their assessment of the feasibility of malaria elimination |
| URL | http://www.who.int/malaria/publications/atoz/9789241507028/en/ |
| Title | Geograph R package |
| Description | Geograph is a framework for GIS analyses in R. A typical application would be computing friction routes. It is more flexible than any currently available GIS freeware and has some unique features, such as the ability to work on a spherical referential rather than 2D maps; this is important when working at large geographic scales as any 2D projection of the world (or large regions thereof) will lead to considerable deformation. |
| Type Of Material | Data analysis technique |
| Year Produced | 2009 |
| Provided To Others? | Yes |
| Impact | used for analysis of geographical data in 19586946 |
| Title | Global Dengue Transmission Map |
| Description | This publicly available web tool visualises by adm1 region estimates of dengue force of infection derived from age-stratified seroprevalence and incidence estimates. The webtool also calculates expected seroprevalence at each age, and the age at which a target seroprevalence is reached. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | This web tool was commissioned by and approved by the World Health Organization IVIR-AC committee and forms part of the official package of "tools to support decision-making for the addition of the licensed dengue vaccine into a public immunization programme" (http://www.who.int/immunization/research/development/dengue_serosurveys/en/) |
| URL | https://mrcdata.dide.ic.ac.uk/_dengue/dengue.php |
| Title | HBV model - 2016 |
| Description | A model that helps to evaluate HBV vaccination policy |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | A model that helps to evaluate impact of the current vaccination policy and to evaluate policy choices going forward for China CDC |
| Title | Hong Kong Flu Contacts - 2014 |
| Description | Contact and serological data form Hong Kong |
| Type Of Material | Database/Collection of data |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | Too early to determine. |
| URL | http://rspb.royalsocietypublishing.org/content/281/1789/20140709/suppl/DC1 |
| Title | Imperial College/Public Health Foundation of India (ICPHFI) model for the TB epidemic in India - 2014 |
| Description | Model developed to capture the healthcare system in India, and TB transmission |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | Model is being applied to address different questions of TB strategy, by PHFI colleagues |
| Title | Large scale kernels |
| Description | general method for fitting spatial processes with complete flexibility |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | 1 paper under revision |
| Title | Malaria - Housing Preference Dataset |
| Description | Xls / Stata, preferences of n=400 households who are recipients of the Roopfs housing intervention. Data base was generated through a cross-section survey among households receiving house improvements as part of a Randomized-controlled trial in The Gambia. They were asked about money spent on housing, about their satisfaction with the house (and its components) and about malaria perception, in addition to personal/socio-economic characteristics. |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Analysis and publications in progress |
| Title | Malaria - Housing Preference Dataset. Roopfs Study - Housing Preferences in Rural Gambia |
| Description | Xls / Stata, preferences of n=400 households who are recipients of the Roopfs housing intervention. Data base was generated through a cross-section survey among households receiving house improvements as part of a Randomized-controlled trial in The Gambia. They were asked about money spent on housing, about their satisfaction with the house (and its components) and about malaria perception, in addition to personal/socio-economic characteristics. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | No |
| Impact | Analysis and publications in progress |
| Title | Malaria - SMC risk perception |
| Description | Xls / Stata, preferences of n=2000 respondents who are recipients of the Roopfs housing intervention. Data base was generated through a cross-section survey among households receiving SMC Randomized-controlled trial in Burkina Faso. |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Analysis and publications in progress. |
| Title | Malaria - SMC risk perception SMC perceived malaria risk, migration& remittances - Burkina Faso & Mali |
| Description | Xls / Stata, preferences of n=2000 respondents who are recipients of the Roopfs housing intervention. Data base was generated through a cross-section survey among households receiving SMC Randomized-controlled trial in Burkina Faso. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | No |
| Impact | Analysis and publications in progress |
| Title | Malaria drug resistance mutations database |
| Description | Systematic review of sulphadoxine-pyrimethamine resistance in plasmodium falciparum |
| Type Of Material | Database/Collection of data |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | None yet. |
| Title | Meta analysis of impact of pyrethoid resistance on mosquito control |
| Description | Generated and analysed a database and provided raw data and analysis online |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | Provided online meta analysis of the impact of pyrethoid resistance on mosquito control |
| URL | https://elifesciences.org/content/5/e16090 |
| Title | Methods of determining Malaria elimination - 2014 |
| Description | method to determine whether malaria will be eliminated from a country if disease importation ceased |
| Type Of Material | Data analysis technique |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | method is being discussed by WHO |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/newssummary/news_12-6-2014-18-17-49 |
| Title | Model Library for TB models -2017 |
| Description | Library of curated TB models for use by students and collaborators |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Used library to teach TB modelling to collaborators |
| Title | Model for estimating mutation frequencies in parasites |
| Description | R-code for estimating mutation frequencies from data on the prevalence of drug resistance in infected humans |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | None yet |
| Title | Montagu |
| Description | Vaccine impact estimates generated by the members of the VIMC specifying estimated disease burden for ten diseases in 98 low and middle income countries |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | No |
| Impact | Informing the funders regarding the impact of vaccination they fund |
| URL | https://montagu.vaccineimpact.org/ |
| Title | Outbreaks |
| Description | open data on outbreaks |
| Type Of Material | Database/Collection of data |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | over 500 downloads per month from predominantly external users |
| URL | http://www.repidemicsconsortium.org/outbreaks |
| Title | PCR data sets analysis improvement - 2015 |
| Description | PCR (polymerase chain reaction) data analysis technique normally does not have uncertainty around it, the new analysis technique generates 95% confidence intervals for quantitative PCR derived data. |
| Type Of Material | Data analysis technique |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | Paper published: "Improving statistical inference on pathogen densities estimated by quantitative molecular methods: malaria gametocytaemia as a case study" |
| Title | Patterns of TB care seeking in urban slums in India (The Foundation for Medical Research, India) - 2015 |
| Description | Arising from surveys in urban slums in India (in Patna and Mumbai), the database casts fresh light on the care seeking amongst TB patients in these areas. The surveys were conducted by the Foundation for Medical Research, and Dr. Pathy's involvement is to help them in its statistical analysis. |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Performing statistical analysis for a paper to be published |
| Title | Providing quality of life estimates for people who live in Sub -Saharan Africa |
| Description | Parameter estimates for future studies |
| Type Of Material | Data analysis technique |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Not yet |
| Title | Public Health England Serum Archive data - 2015 |
| Description | It is a database of anitbody titres for different influenza strains for anonymized samples collected in england and wales between 1999 and 2004 |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | Not published yet. |
| Title | Rakai dataset - 2016 |
| Description | Dataset with epidemiological information on HIV incident cases and HIV serodiscordent couples in the Rakai communities in Uganda |
| Type Of Material | Database/Collection of data |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | Publically available |
| URL | http://datadryad.org/resource/doi:10.5061/dryad.7kr85 |
| Title | SP resistance |
| Description | Systematic review of the prevalence of mutations associated with resistance to the antimalarial drug sulphadoxine-pyrimethamine. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Shared with WHO and the Worldwide Antimalarial Resistance Network. |
| URL | https://www.ncbi.nlm.nih.gov/pubmed/28785011 |
| Title | SeqTrack |
| Description | SeqTrack is an algorithm for reconstructing genealogies implemented in the adegenet package in the R environment |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2010 |
| Provided To Others? | Yes |
| Impact | none as yet |
| Title | Stacking |
| Description | ensemble method to combine metamodels |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | 2 pubs in Nature (IHME) and 1 pub in Royal Society Interface (IC) |
| Title | TB Burden inference through drug sales method |
| Description | TB Burden inference through drug sales method |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2016 |
| Provided To Others? | Yes |
| Impact | IMS health using in collab with Gates foundation |
| URL | http://www.sciencedirect.com/science/article/pii/S1473309916302596 |
| Title | The role of rapid diagnostics in managing Ebola epidemics - 2015 |
| Description | Evaluating for optimal strategy in use of different forms of diagbostic tools |
| Type Of Material | Data analysis technique |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | Publically available analysis tools for download in Excel - PMID: 26633764 |
| Title | TransPhylo (2014) |
| Description | Software package for the Bayesian inference of infectious disease transmission from a phylogeny. The input is a dated phylogeny, where leaves correspond to pathogens isolated from the infected hosts. The main output is a transmission tree which indicates who infected whom. Such reconstruction can be achieved by colouring the branches of the phylogeny using a separate colour for each host, and such that the subtree coloured in a given colour represents the evolution happening within the corresponding host. Changes of colours on branches therefore correspond to transmission events from one host to another. |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | PMID 24714079 |
| URL | https://code.google.com/p/transphylo/ |
| Title | UK HIV Drug Resistance Sequences Database - 2015 |
| Description | Analysis of clinical and demographic patient data through 2012 |
| Type Of Material | Database/Collection of data |
| Provided To Others? | No |
| Impact | The HIV Drug Resistance Database provides a unique resource for molecular epidemiological studies of HIV transmission among more than 60 thousand patients diagnosed with HIV in the UK. The database contains unique information about risk factors for HIV transmission, and our group is developing and applying novel statistical approaches to mining this information with the ultimate goal of tailoring public health interventions to reduce transmission risk. |
| URL | http://www.hivrdb.org.uk/ |
| Title | Within-host model |
| Description | A within host model describing malaria parasites over time in patients, and the effects of drugs on them. |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | None yet |
| URL | https://www.ncbi.nlm.nih.gov/pubmed/29123086 |
| Title | World Development Indicators - 2015 |
| Description | In order to identify which determinants are most strongly associated with life expectancy, using extreme bound analysis technique applied to this publically available data set. |
| Type Of Material | Data analysis technique |
| Provided To Others? | No |
| Impact | Used for a forthcoming paper |
| URL | http://data.worldbank.org/data-catalog/world-development-indicators |
| Title | colgem - 2013 |
| Description | Software tool. 'Coalescent Liklihood for Generalized Epidemic Models'. This tool fits infectious disease models to pathogen genetic sequence data |
| Type Of Material | Data analysis technique |
| Provided To Others? | No |
| Impact | too early to know about this yet. |
| URL | https://code.google.com/p/colgem/ |
| Title | rcolgem - 2013 |
| Description | Software tool. This tool fits infectious disease models to pathogen genetic sequence data |
| Type Of Material | Data analysis technique |
| Year Produced | 2014 |
| Provided To Others? | Yes |
| Impact | currently being used by a researcher at Cambridge (vet. med) and Los Alamos Natl Laboratories. |
| URL | http://colgem.r-forge.r-project.org/ |
| Title | rcolgem - 2015 |
| Description | rcolgem statistical inference and modeling of genealogies generated by epidemic and ecological processes. It is a package for phylodynamic inference using population genetic models. rcolgem implements coalescent models for populations with nonlinear dynamics and potentially many demes. |
| Type Of Material | Data analysis technique |
| Year Produced | 2015 |
| Provided To Others? | Yes |
| Impact | Used in various publications. For ex. http://www.ncbi.nlm.nih.gov/pubmed/26006189 |
| URL | http://colgem.r-forge.r-project.org |
| Description | An integrated approach to understand the emergence and spread of extensively resistant Gram-negative bacteria in China (UCL, Cambridge) |
| Organisation | University College London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from E. coli and K. pneumoniae, especially isolates resistant to carbapenem |
| Collaborator Contribution | Sampling of isolates, whole-genome sequencing, in vitro experiments. |
| Impact | doi: https://doi.org/10.1101/220921 |
| Start Year | 2017 |
| Description | An integrated approach to understand the emergence and spread of extensively resistant Gram-negative bacteria in China (UCL, Cambridge) |
| Organisation | University of Cambridge |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from E. coli and K. pneumoniae, especially isolates resistant to carbapenem |
| Collaborator Contribution | Sampling of isolates, whole-genome sequencing, in vitro experiments. |
| Impact | doi: https://doi.org/10.1101/220921 |
| Start Year | 2017 |
| Description | Armand Sprecher and Dirk Schumacher |
| Organisation | Médecins Sans Frontières (MSF) |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Developing model and r package for optimising contact tracing efforts |
| Collaborator Contribution | Formulating needs for contact tracing efforts during emergency outbreak response |
| Impact | r package Tracer has been published |
| Start Year | 2016 |
| Description | BEEHIVE - Academic Medical Centre -2013 |
| Organisation | HIV Monitoring Foundation (SHM) |
| Country | Netherlands |
| Sector | Charity/Non Profit |
| PI Contribution | BEEHIVE (Bridging the Evolution and Epidemiology of HIV in Europe). Pilot feasibility study |
| Collaborator Contribution | AMC collected samples from Dutch hospitals, storing and documenting them prior to sending to Sanger |
| Impact | European Research Council have awarded a GBP £2m 'Advance Grant' to Imperial College for further research arising out of the pilot study. |
| Start Year | 2010 |
| Description | BEEHIVE - Wellcome Trust -2013 |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | BEEHIVE (Bridging the Evolution and Epidemiology of HIV in Europe). Pilot feasibility study |
| Collaborator Contribution | Sanger carried out genetic sequencing of samples and supplied the research data to Imperial and AMC. |
| Impact | European Research Council have awarded a GBP £2m 'Advance Grant' to Imperial College for further research arising out of the pilot study. |
| Start Year | 2010 |
| Description | BEEHIVE: Bridging the Evolution and Epidemiology of HIV in Europe (2014) |
| Organisation | Academic Medical Center |
| Country | Netherlands |
| Sector | Academic/University |
| PI Contribution | Leadership & scientific coordination |
| Collaborator Contribution | Scientific collaboration; providing data, samples & laboratory analysis/work. |
| Impact | More cohorts involved than anticipated, but too early to report scientific impacts. |
| Start Year | 2011 |
| Description | BEEHIVE: Bridging the Evolution and Epidemiology of HIV in Europe (2014) |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Leadership & scientific coordination |
| Collaborator Contribution | Scientific collaboration; providing data, samples & laboratory analysis/work. |
| Impact | More cohorts involved than anticipated, but too early to report scientific impacts. |
| Start Year | 2011 |
| Description | Baylor College of Medicine |
| Organisation | Baylor College of Medicine |
| Country | United States |
| Sector | Hospitals |
| PI Contribution | Lead coordinator on a study and design of clinical study design |
| Collaborator Contribution | Rotavirus virology; mass spectrometry for breast milk study |
| Impact | N/A |
| Start Year | 2016 |
| Description | Baylor College of Medicine |
| Organisation | University of California, San Francisco |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Lead coordinator on a study and design of clinical study design |
| Collaborator Contribution | Rotavirus virology; mass spectrometry for breast milk study |
| Impact | N/A |
| Start Year | 2016 |
| Description | Biomedical Research and Training Institute (BRTI) |
| Organisation | Biomedical Research and Training Institute (BRTI) |
| Country | Zimbabwe |
| Sector | Charity/Non Profit |
| PI Contribution | Analysis |
| Collaborator Contribution | Field work |
| Impact | Grant |
| Start Year | 2017 |
| Description | Blue-Tongue Virus Modelling for UK |
| Organisation | Department For Environment, Food And Rural Affairs (DEFRA) |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Provided support in model coding and development |
| Impact | Increased understanding of the dynamics and spread of Blue-Tongue virus in the UK. |
| Start Year | 2009 |
| Description | CDC - ABC (Active Bacterial Core surveillance) - Captain Matt Moore - 2015 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Data analysis and modelling |
| Collaborator Contribution | Data interpretation and epidemiological analysis |
| Impact | Forthcoming publication |
| Start Year | 2015 |
| Description | CDC - Risk of air-travel spread of Yellow Fever Virus from Brazil into the United States |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Dr Ilaria Dorigatti conducted the analysis (i.e. developed the methodological framework and implemented the code used to generate the results), wrote the reports and communicated the results to the CDC. Prof Christl Donnelly and Dr Tini Garske provided feedback on the analysis and results and participated to the discussion with the CDC about the implications of the results. |
| Collaborator Contribution | The CDC provided the data necessary to conduct this research and useful discussion around the findings, which are currently being drafted in a publication on sustainable public health strategies involving vaccination that could avoid the introduction of Yellow Fever into the United States in future outbreaks. |
| Impact | This analysis has informed the CDC on potential strategies to adopt in the future to prevent Yellow Fever introduction into the US. A paper will be submitted for publication. |
| Start Year | 2017 |
| Description | CHAI - Taryn Barker |
| Organisation | Clinton Health Access Initiative |
| Country | United States |
| Sector | Charity/Non Profit |
| PI Contribution | Data analysis, guidance for programme operation |
| Collaborator Contribution | Provide data |
| Impact | 1 Manuscript under review - Journal TBC |
| Start Year | 2016 |
| Description | COSI |
| Organisation | Biotechnology and Biological Sciences Research Council (BBSRC) |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | statistical analysis of swine influenza |
| Collaborator Contribution | access to data on swine influenza |
| Impact | project funded by the BBSRC, MRC, Wellcome Trust (who contributed equally to the costs). DEFRA have also provided support |
| Start Year | 2009 |
| Description | China CDC |
| Organisation | China Centre for Disease Control |
| Country | China |
| Sector | Public |
| PI Contribution | Statistical description of the H1N1 pandemic in China |
| Collaborator Contribution | We were provided access to data on the H1N1 pandemic in China and were able to gain an understanding of disease spread in this area of the world. |
| Impact | Publication submitted to The Lancet |
| Start Year | 2009 |
| Description | China CDC and China WHO |
| Organisation | Chinese Center for Disease Control and Prevention (China CDC) |
| Country | China |
| Sector | Public |
| PI Contribution | Modelling expertise |
| Collaborator Contribution | Provide data |
| Impact | 1 Manuscript under review - Journal TBC |
| Start Year | 2016 |
| Description | Collaborating Institute on Polio-2013 |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Data analysis and modelling |
| Collaborator Contribution | Polio data |
| Impact | An indirect consequence of this collaboration is that funding from the WHO has successfully been sought, after WHO based individuals at the Collaborating Institute on Polio suggested that we should apply for funding. Our subsequent application was successful (see 'Global Polio Eradication Initiative' under further funding). |
| Start Year | 2013 |
| Description | Collaboration with Univ of Pittsburgh (Don Burke) via NIH MIDAS network |
| Organisation | University of Pittsburgh |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | I developed pandemic influenza simulations for modelling intervention strategies |
| Collaborator Contribution | Collection of data, exchange of ideas, interaction with US policymakers |
| Impact | This work represented a major source of evidence to support pandemic preparedness work undertaken by the US, UK, WHO and other countries. Outputs were PubMed ID 16642006 and the following 2005 paper: Ferguson NM; Cummings DA; Cauchemez S; Fraser C; Riley S; Meeyai A; Iamsirithaworn S; Burke DS. (08 Sep 2005). Strategies for containing an emerging influenza pandemic in Southeast Asia. Nature. 437:209-214. (PubMed ID 16079797) |
| Start Year | 2006 |
| Description | Combined Phylogenetic and Epidemiological Analysis in Seattle |
| Organisation | National Institutes of Health (NIH) |
| Country | United States |
| Sector | Public |
| PI Contribution | Nothing yet |
| Collaborator Contribution | Data collection in future |
| Impact | Nothing yet. |
| Start Year | 2014 |
| Description | Dengue Modelling Consortium JHU-2013 |
| Organisation | Johns Hopkins University |
| Department | Johns Hopkins Bloomberg School of Public Health |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Founder. Also one of three academic groups providing modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Collaborator Contribution | Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Impact | none yet |
| Start Year | 2013 |
| Description | Dengue Modelling Consortium SP-2013 |
| Organisation | Sanofi Pasteur MSD |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | Founder. Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Collaborator Contribution | Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Impact | none yet |
| Start Year | 2013 |
| Description | Dengue Modelling Consortium UoF-2013 |
| Organisation | University of Florida |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Founder. Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Collaborator Contribution | Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Impact | none yet |
| Start Year | 2013 |
| Description | Dengue Modelling Consortium UoW-2013 |
| Organisation | University of Washington |
| Department | Department of Biostatistics |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Founder. Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Collaborator Contribution | Modelling and analysis of Sanofi Pasteur's dengue vaccine candidate. |
| Impact | none yet |
| Start Year | 2013 |
| Description | Department of Statistics Oxford Univ. Dino Sejdinovic |
| Organisation | University of Oxford |
| Department | Department of Statistics |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Research |
| Collaborator Contribution | Research |
| Impact | Special Statistics-paper under revision, Bhatt,2017 |
| Start Year | 2017 |
| Description | Dr Halimatou Diawara and Prof Alassane Dicko. |
| Organisation | University of Bamako |
| Department | Malaria Research and Training Centre (MRTC) Bamako |
| Country | Mali |
| Sector | Academic/University |
| PI Contribution | PhD supervisor |
| Collaborator Contribution | PhD supervisor, primary data collection, access to Malian health policy makers |
| Impact | forthcoming publications |
| Start Year | 2015 |
| Description | ECDC |
| Organisation | European Centre for Disease Prevention and Control (ECDC) |
| Country | Sweden |
| Sector | Public |
| PI Contribution | Review of the national and local experiences on school closures during the 2009 H1N1 pandemic |
| Collaborator Contribution | Access to data on school closures during the 2009 H1N1 pandemic for use in the development of new analysis tools and methods. |
| Impact | a manuscript is in preparation, presentation to ECDC |
| Start Year | 2010 |
| Description | ESP - 2015 |
| Organisation | Global Fund to Fight AIDS, Tuberculosis and Malaria |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Support for Elimination Scenario Planning exercises using modelling to support strategic planning in endemic countries |
| Collaborator Contribution | Support for the country process and provision of local data |
| Impact | Forthcoming |
| Start Year | 2015 |
| Description | Estimating burden of influenza in USA - 2014 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Developing model to assist CDC in interpreting their surveillance systems |
| Collaborator Contribution | Providing data and expertise |
| Impact | Papers in progress: collaboration with public health officials at CDC |
| Start Year | 2013 |
| Description | Estimating burden of influenza in USA - 2014 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Developing model to assist CDC in interpreting their surveillance systems |
| Collaborator Contribution | Providing data and expertise |
| Impact | Paper published, collaboraiton with public health officials at CDC |
| Start Year | 2013 |
| Description | Estimation of HIV transmission dynamics using genomic sequences-2013 |
| Organisation | Michigan State University |
| Department | Department of Community Health |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | All analysis of data first author on PMID: 22761556 |
| Collaborator Contribution | provision of anonymised data set. |
| Impact | PMID: 22761556 |
| Start Year | 2010 |
| Description | FIND Diagnostics India - 2015 |
| Organisation | FIND Diagnostics (India) |
| Country | Switzerland |
| Sector | Public |
| PI Contribution | Contributed statistical analysis to "Use of Xpert MTB/RIF in Decentralized Public Health Settings and Its Effect on Pulmonary TB and DR-TB Case Finding in India" and led the modelling efforts for the publication "The Potential Impact of Up-Front Drug Sensitivity Testing on India's Epidemic of Multi-Drug Resistant Tuberculosis" |
| Collaborator Contribution | Co-authored several papers |
| Impact | One paper published, one in review, and one in preparation stage. |
| Start Year | 2015 |
| Description | Flu Vaccination programme efficacy modelling-2013 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Assessment of transmission model. |
| Collaborator Contribution | Assessment of transmission model. |
| Impact | Paper to report on this work is in publication. |
| Start Year | 2012 |
| Description | FluScape Liverpool (2014) |
| Organisation | University of Liverpool |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Helped to win grants and publish papers |
| Collaborator Contribution | Helped to win grants and publish papers |
| Impact | Several papers published. |
| Start Year | 2008 |
| Description | Fluscape GZ12 (2013) |
| Organisation | Guangzhou No. 12 People's Hospital |
| Country | China |
| Sector | Hospitals |
| PI Contribution | Analysis |
| Collaborator Contribution | Field work |
| Impact | none yet |
| Start Year | 2009 |
| Description | GAVI Alliance |
| Organisation | Bill and Melinda Gates Foundation |
| Department | Global Alliance for Vaccination and Immunisation (GAVI) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | (2016) Established Vaccine Impact Modelling Consortium to provide vaccine impact estimates to Gavi and improve used models. (2017) Gavi Alliance (yellow fever)/ Olivia Bullock (2016-Dec 2017) and now Holly Prudden (Since Jan 2018) |
| Collaborator Contribution | Provide funding and contacts to modelling groups |
| Impact | Montagu -delivery platform for vaccine impact estimates; vaccine impact estimates - still in progress - to have the full set of this update by the end of March - Funders will use these estimates for communication fundraising and shaping policy |
| Start Year | 2016 |
| Description | GFATM (Erik Volz consultancy) - 2015 |
| Organisation | Global Fund to Fight AIDS, Tuberculosis and Malaria |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Modelling the impact of treatment-as-prevention on HIV in Nigeria and the role of concentrated transmission in high risk groups. |
| Collaborator Contribution | Provision of questions and data |
| Impact | Paper and a policy brief which are currently in review. |
| Start Year | 2015 |
| Description | GFATM - 2015 |
| Organisation | Global Fund to Fight AIDS, Tuberculosis and Malaria |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Collaboration on modelling malaria to inform the investment case, 2017-2022 strategy refresh and allocation formula |
| Collaborator Contribution | Provision of questions and data |
| Impact | Forthcoming |
| Start Year | 2015 |
| Description | GSK - 2013 |
| Organisation | GlaxoSmithKline (GSK) |
| Department | GSK Biologicals SA |
| Country | Belgium |
| Sector | Private |
| PI Contribution | Understanding biological mechanisms in the RTS,S vaccine and implications for public health impact |
| Collaborator Contribution | Provision of data from all Phase II studies |
| Impact | PMID 23613845; PMID 23454164, PMID 25012228; One submitted publication; Multiple conference presentations |
| Start Year | 2011 |
| Description | Global lineages |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Data analysis and laboratory work |
| Collaborator Contribution | Data provision |
| Impact | Publications |
| Start Year | 2012 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | Brown University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | Harvard University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | Indiana University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | International Epidemiologic Databases to Evaluate AIDS (IeDEA) |
| Country | Global |
| Sector | Charity/Non Profit |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | Ministry of Defence (MOD) |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | University College London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | University of Bristol |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | University of North Carolina at Chapel Hill |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Modelling Consortium (2014) |
| Organisation | University of York |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | The HIV Modelling Consortium leads the coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Its central objective is to help improve scientific support for decision-making by coordinating a wide range of research activities in the mathematical modelling of the HIV epidemic. |
| Collaborator Contribution | Research activities in the mathematical modelling of the HIV epidemic. |
| Impact | Coordinated interaction between modelling groups and policy makers, in conjunction with the targeted and responsive commissioning of new work. Improved scientific support for decision-making with regard to the HIV epidemic. |
| Start Year | 2010 |
| Description | HIV Monitoring Foundation - Prof Peter Reiss - 2015 |
| Organisation | HIV Monitoring Foundation (SHM) |
| Country | Netherlands |
| Sector | Charity/Non Profit |
| PI Contribution | Modelling and phylogenetics |
| Collaborator Contribution | Clinical data and epidemiological monitoring |
| Impact | PMID: 26558543, 26529093, 26738795 |
| Description | HIV estimation in Europe |
| Organisation | Academic Medical Center |
| Country | Netherlands |
| Sector | Academic/University |
| PI Contribution | statistical and modelling techniques for estimating HIV transmission |
| Collaborator Contribution | access to data on HIV transmission in Europeaccess to data on HIV transmission in Europe |
| Impact | Estimating the risk of HIV transmission from homosexual men receiving treatment to their HIV-uninfected partners. Hallett TB, Smit C, Garnett GP, de Wolf F. Sex Transm Infect. 2010 Jul 18. |
| Start Year | 2010 |
| Description | HIV estimation in Europe |
| Organisation | University of Bern |
| Country | Switzerland |
| Sector | Academic/University |
| PI Contribution | statistical and modelling techniques for estimating HIV transmission |
| Collaborator Contribution | access to data on HIV transmission in Europeaccess to data on HIV transmission in Europe |
| Impact | Estimating the risk of HIV transmission from homosexual men receiving treatment to their HIV-uninfected partners. Hallett TB, Smit C, Garnett GP, de Wolf F. Sex Transm Infect. 2010 Jul 18. |
| Start Year | 2010 |
| Description | HPTN071 PopART |
| Organisation | PoPART Consortium |
| Country | France |
| Sector | Academic/University |
| PI Contribution | Economic evaluation of the PopART intervention |
| Collaborator Contribution | Multi-disciplinary work with integrating an individual based disease transmission model |
| Impact | One pub in Lancet Global Health and others to be submitted soon |
| Start Year | 2012 |
| Description | Health Map |
| Organisation | HealthMap |
| Sector | Charity/Non Profit |
| PI Contribution | Gather data from various sources and build a model to estimate a risk of transmission of a pathogen from one country to another |
| Collaborator Contribution | Use model outputs to create maps and curate a website |
| Impact | N/A |
| Start Year | 2016 |
| Description | Healthsites.io |
| Organisation | Healthsites.io |
| Country | France |
| Sector | Private |
| PI Contribution | Gather data from various sources and build a model to estimate a risk of transmission of a pathogen from one country to another |
| Collaborator Contribution | Collect and provide data on healthcare facilities |
| Impact | N/A |
| Start Year | 2016 |
| Description | IHME |
| Organisation | Institute for Health Metrics and Evaluation (IHME) |
| Country | United States |
| Sector | Charity/Non Profit |
| PI Contribution | Research |
| Collaborator Contribution | Research |
| Impact | 2 papers accepted - Nature |
| Start Year | 2017 |
| Description | IRSS- Burkina Faso |
| Organisation | National Center for Scientific and Technological Research (CNRST) |
| Department | Institute of Research in Health Sciences |
| Country | Burkina Faso |
| Sector | Public |
| PI Contribution | PI on a succesful MRC programme grant investigating mosquito biology and evaluation of control interventions. Provided technical and analytical training to Burkinabe scientists |
| Collaborator Contribution | Field team in Burkina running major field component of an MRC programme grant |
| Impact | none yet |
| Start Year | 2017 |
| Description | IRSS- Institut de Recherche en Science de la Sante - Burkina Faso |
| Organisation | National Center for Scientific and Technological Research (CNRST) |
| Department | Institute of Research in Health Sciences |
| Country | Burkina Faso |
| Sector | Public |
| PI Contribution | PI on a succesful MRC programme grant investigating mosquito biology and evaluation of control interventions. Provided technical and analytical training to Burkinabe scientists |
| Collaborator Contribution | Nothing to report |
| Impact | Nothing to report |
| Start Year | 2017 |
| Description | Influenza in China |
| Organisation | China Centre for Disease Control |
| Country | China |
| Sector | Public |
| PI Contribution | Expertise in the epidemiological/statistical analysis and modelling of influenza. |
| Collaborator Contribution | Exchange of existing data and collection of new data on mobility in China |
| Impact | Exchange of existing data, collection of new data on mobility in China and building modelling capacity in China |
| Start Year | 2007 |
| Description | Influenza transmission in Singapore |
| Organisation | Tan Tock Seng Hospital |
| Country | Singapore |
| Sector | Hospitals |
| PI Contribution | Support for fellowship (mentor and collaborators) to develop and apply models of influenza transmission in Singapore. Also an on-going collaboration on STD modelling |
| Collaborator Contribution | provision of influenza data from Singapore. |
| Impact | Increased mathematical modelling capacity at the National University of Singapore |
| Start Year | 2009 |
| Description | Institut Pasteur - Herve Bourhy |
| Organisation | Pasteur Institute, Paris |
| Department | Laboratory Lysavirus Dynamics and Host Adaptation |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Analyse data |
| Collaborator Contribution | Provide data |
| Impact | Supervise an MSc student, workshop on rabies in Cameroon (Dec 2016) |
| Start Year | 2014 |
| Description | Institut Pasteur - Simon Cauchemez |
| Organisation | Pasteur Institute, Paris |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Analyse data on MERS-CoV virus |
| Collaborator Contribution | Analyse data on MERS-CoV virus |
| Impact | doi: 10.1073/pnas.1519235113 |
| Start Year | 2014 |
| Description | Institute for Disease Modelling in Seattle. Phil Ekhoff |
| Organisation | Intellectual Ventures |
| Country | United States |
| Sector | Private |
| PI Contribution | Bringing spatial expertise to outbreak mapping |
| Collaborator Contribution | Josh Procter and Phil Ekhoff. Core new method for outbreak mapping |
| Impact | Various presentations IVCC invited speaker. RBM. 1 paper under review submitted Nature Communications (still to be published) |
| Start Year | 2016 |
| Description | Institute of human virology - similar to global fund |
| Organisation | University of Maryland |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Modelling the impact of treatment-as-prevention on HIV in Nigeria and the role of concentrated transmission in high risk groups. |
| Collaborator Contribution | Modelling the impact of treatment-as-prevention on HIV in Nigeria and the role of concentrated transmission in high risk groups. |
| Impact | Paper and a policy brief which are currently in review. |
| Start Year | 2016 |
| Description | Ionnis Karagianis (coordinator) & Sam Bracebridge (Director) -Public Health England - for the Development of training material for outbreak response and field epidemiology (FETP) |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Develop projects within the health protection research unit (HPRU) collaboration framework. Outbreak surveillance system and training platform for field epidemiologists |
| Collaborator Contribution | Provided expertise in development of projects |
| Impact | Creation of a new website for online training (RECON Learn) |
| Start Year | 2017 |
| Description | Javier Martin (Dr) |
| Organisation | National Institute for Biological Standards and Control (NIBSC) |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Sequencing and analysis of polio virus in environmental samples |
| Collaborator Contribution | Virus isolation and sequencing |
| Impact | not yet |
| Start Year | 2017 |
| Description | LSHTM |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Department | Faculty of Epidemiology and Population Health |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | expertise in modelling the impact of school closure on influenza transmission |
| Impact | The impact of illness and the impact of school closure on social contact patterns. EAMES, K.T.; Tilston, N.L.; White, P.J.; Adams, E.; EDMUNDS, W.J.; Health Technol Assess, 2010; 14(34):267-312 NIHR grant awarded |
| Start Year | 2009 |
| Description | LSHTM - DPMB |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Department | Department of Pathogen Molecular Biology |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Statistical analysis, writing publications |
| Collaborator Contribution | Data, scientific advice, contributing to publication. |
| Impact | Publication: https://www.ncbi.nlm.nih.gov/pubmed/28785011 |
| Start Year | 2013 |
| Description | LSHTM - malaria collaboration |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Department | Malaria Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Advising on interpretation of transmission studies |
| Collaborator Contribution | Collected data |
| Impact | 1 Manuscript in review |
| Start Year | 2016 |
| Description | Lancet Commission on TB (UN, UCSF) |
| Organisation | University of California, San Francisco |
| Department | School of Medicine (UCSF) |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Developed TB Modelling for three different countries in support of upcoming Lancet Commission on TB - which will result in a publication in the Lancet |
| Collaborator Contribution | Provide coordination between our modelling research and the rest of the commission |
| Impact | Two products - manuscript on TB modelling and a report by the Commission ( March - June 2018). |
| Start Year | 2017 |
| Description | Larry Liao - 2016 |
| Organisation | Jinan University |
| Country | China |
| Sector | Academic/University |
| PI Contribution | provision of samples |
| Collaborator Contribution | immuniological assays |
| Impact | no impacts yet |
| Start Year | 2016 |
| Description | MERS Coronovirus- Pasteur -2013 |
| Organisation | Pasteur Institute, Paris |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Assessing epidemic risk of MERS-CoV. Implications for health risk assessment and control. |
| Collaborator Contribution | Assessing epidemic risk of MERS-CoV. Implications for health risk assessment and control. |
| Impact | Corresponding publication. PMID 23787162 |
| Start Year | 2013 |
| Description | MERS Coronovirus- Saudi -2013 |
| Organisation | Government of Saudi Arabia |
| Country | Saudi Arabia |
| Sector | Public |
| PI Contribution | Assessing epidemic risk of MERS-CoV. Implications for health risk assessment and control. |
| Collaborator Contribution | Assessing epidemic risk of MERS-CoV. Implications for health risk assessment and control. |
| Impact | Corresponding publication. PMID 23787162 |
| Start Year | 2013 |
| Description | MERS-CoV collaboration - 2014 |
| Organisation | Government of Saudi Arabia |
| Country | Saudi Arabia |
| Sector | Public |
| PI Contribution | Epidemiological analysis and modelling of the MERS-Coronavirus epidemic in Saudi Arabia. |
| Collaborator Contribution | Access to data. Analysis and modelling. |
| Impact | Provided epidemiological analysis and modelling of the MERS-Coronavirus epidemic in Saudi Arabia. |
| Start Year | 2014 |
| Description | MERS-CoV collaboration - 2014 |
| Organisation | Johns Hopkins University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Epidemiological analysis and modelling of the MERS-Coronavirus epidemic in Saudi Arabia. |
| Collaborator Contribution | Access to data. Analysis and modelling. |
| Impact | Provided epidemiological analysis and modelling of the MERS-Coronavirus epidemic in Saudi Arabia. |
| Start Year | 2014 |
| Description | MIDAS with Pasteur (2014) |
| Organisation | Pasteur Institute, Paris |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Grant won from NIH |
| Collaborator Contribution | Co-wrote the grant application |
| Impact | None yet. |
| Start Year | 2013 |
| Description | MMV -2013 |
| Organisation | Medicines for Malaria Venture (MMV) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Development and application of models to consider the impact of and cost-effectiveness of switching to a new drug for first-line therapy in African countries (the impact of different anti-malarials as first-line therapy) |
| Collaborator Contribution | Provision of data, insight into appropriate questions |
| Impact | Paper in draft; Conference presentations at ASTMH 2012, Multilateral Initiative on Malaria Conference 2013 |
| Start Year | 2012 |
| Description | MSF - Malaria collaboration |
| Organisation | Médecins Sans Frontières (MSF) |
| Department | Médecins Sans Frontières Operational Centre Amsterdam (MSF OCA) |
| Country | Netherlands |
| Sector | Charity/Non Profit |
| PI Contribution | Co-supervising PhD looking into Malaria in humanitarian settings |
| Collaborator Contribution | Provided data and expertise |
| Impact | Training provided in malaria control to MSF country managers. |
| Start Year | 2016 |
| Description | MVI - 2013 |
| Organisation | European Vaccine Initiative (EVI) |
| Country | Germany |
| Sector | Charity/Non Profit |
| PI Contribution | Estimating the public health impact of the RTS,S vaccine and research into transmission-blocking vaccine measurement and trial design |
| Collaborator Contribution | Provision of data, discussion meetings |
| Impact | Paper in draft; Report to GAVI; Conference presentations at Multilateral Initiative on Malaria Conference 2013, Epidemics 2013 and ASTMH 2013 |
| Start Year | 2012 |
| Description | Malaria Atlas Project |
| Organisation | University of Oxford |
| Department | Big Data Institute |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Bringing spatial expertise to outbreak mapping |
| Collaborator Contribution | Data |
| Impact | NEJM - paper. Bhatt, S 2016. Nature- paper, Bhatt, 2017 |
| Start Year | 2016 |
| Description | Malawi Public Health Institute |
| Organisation | Public Health Institute of Malawi |
| Country | Malawi |
| Sector | Public |
| PI Contribution | Analyse data |
| Collaborator Contribution | Collect data |
| Impact | not yet |
| Start Year | 2018 |
| Description | Marc Lipsitch and Yonatan Grad (Harvard University) - 2015 |
| Organisation | Harvard University |
| Department | Harvard T.H. Chan School of Public Health |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Drug-resistance in gonorrhea: reviewing the literature, sythesising evidence, and identifying gaps in knowledge to propose a research agenda |
| Collaborator Contribution | All authors reviewed the literature, sythesised evidence, and identifed gaps in knowledge to propose a research agenda |
| Impact | PMID: 26518045 |
| Start Year | 2015 |
| Description | Marisa Miraldo - 2016 |
| Organisation | Imperial College London |
| Department | Department of Physics |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Managed the collaboration |
| Collaborator Contribution | Expertise in behavioral econ in designing and conducting flu vaccination study (PHE Porton Down) |
| Impact | Data from final survey awaited. Likelihood check. Then apply for grant in the future to expand detail and scale of experiment (including lab experiments) |
| Start Year | 2016 |
| Description | Mathematical models for Viet Nam & Cambodia to explore the impact of control measures to reduce the risk of H5N1 outbreaks in poultry |
| Organisation | Government of the UK |
| Department | Department for International Development (DfID) |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Development and fitting of mathematical models to inform policy |
| Collaborator Contribution | Intellectual input |
| Impact | greater understanding of the impact of control measures on the spread of avian influenza. |
| Start Year | 2008 |
| Description | Mathematical models for the Swiss resurgent HIV epidemic |
| Organisation | Government of the Swiss Confederation |
| Department | Department of Public Health |
| Country | Switzerland |
| Sector | Public |
| PI Contribution | Development and fitting of models to inform policy |
| Collaborator Contribution | intellectual input |
| Impact | Increased understanding of the resurgence of HIV in Switzerland |
| Start Year | 2008 |
| Description | Matteo Gallizi (LSE) |
| Organisation | London School of Economics and Political Science (University of London) |
| Department | Department of Social Policy |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Managed the collaboration |
| Collaborator Contribution | Expertise in behavioural econ in designing and conducting flu vaccination study (PHE Porton Down). Experiments done in collaboration with Porton Down as well as independently with Matteo and Marisa and a PhD student |
| Impact | Data from final survey awaited. Likelihood check. Then apply for grant in the future to expand detail and scale of experiment (including lab experiments) Day-long PPI panel in September |
| Start Year | 2016 |
| Description | Medicines for Malaria Venture |
| Organisation | Medicines for Malaria Venture (MMV) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Developing models to answer questions posed by collaborator. |
| Collaborator Contribution | Ideas for research, scientific advice on research. |
| Impact | https://www.ncbi.nlm.nih.gov/pubmed/28814310 and https://www.ncbi.nlm.nih.gov/pubmed/29123086 |
| Start Year | 2013 |
| Description | Medicines for Malaria Venture - 2015 |
| Organisation | Medicines for Malaria Venture (MMV) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Mathematical modelling of impact of different anti-malerial drugs on transmission |
| Collaborator Contribution | Provide scientific advice and data, and funding |
| Impact | PMID: 25425081 |
| Start Year | 2013 |
| Description | Memorandum of Understanding with National Institute of Health - Colombia |
| Organisation | Colombian Institute of Family Welfare |
| Country | Colombia |
| Sector | Private |
| PI Contribution | Commitment to cooperative working and exchange of research in public health and education activities in science and technology. |
| Collaborator Contribution | Commitment to cooperative working and exchange of research in public health and education activities in science and technology. |
| Impact | Kelly Charniga funded by Imperial President Scholarship |
| Start Year | 2017 |
| Description | Methods for modelling transmission in households |
| Organisation | Harvard University |
| Department | Harvard T.H. Chan School of Public Health |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Development & fitting of mathematical models to inform policy |
| Collaborator Contribution | data sharing and intellectual input |
| Impact | data sharing and intellectual discourse |
| Start Year | 2009 |
| Description | Methods for using sequence data in epidemic models |
| Organisation | University of Edinburgh |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | mathematical modelling expertise |
| Impact | linking epidemiological data with human and pathogen genetic data |
| Start Year | 2009 |
| Description | MiP - 2014 |
| Organisation | Malaria in Pregnancy Consortium |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Continued collaboration modelling the impact of new strategies for reducing the burden of malaria in pregnancy |
| Collaborator Contribution | Modelling results |
| Impact | PMID: 25103519; PMID: 23511473 |
| Start Year | 2012 |
| Description | Miren Iturizza-Gomara (Prof-Mrs) University of Liverpool |
| Organisation | University of Liverpool |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Microbiome analysis |
| Collaborator Contribution | Provide rotavirus |
| Impact | 1 publication BMJ Open |
| Start Year | 2016 |
| Description | Modelling HIV evolution |
| Organisation | Johns Hopkins University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Development and fitting of mathematical models to better understand HIV evolution |
| Collaborator Contribution | Provision of data |
| Impact | 17954909 |
| Start Year | 2006 |
| Description | Modelling Influenza in the USA - 2013 |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | Expertise in the epidemiological/statistical analysis and modelling of influenza. |
| Collaborator Contribution | Exchange of existing data and collaborative work on modelling disease trends. Collection of data on index patients and expertise in disease surveillance and influenza epidemiology |
| Impact | Exchange of existing data and collaborative work on modelling disease trends. |
| Start Year | 2007 |
| Description | Modernising Medical Microbiology 2013 and 2014 |
| Organisation | University of Oxford |
| Department | Nuffield Department of Clinical Medicine |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from Staphylococcus aureus and Clostridium difficile isolated from hospital settings, with the aim to improve our understanding of both evolution and epidemiology |
| Collaborator Contribution | Sampling of isolates and whole-genome sequencing. Expertise in clinical microbiology. |
| Impact | PMID 23259504, 23164609, 23204167, 23658690, 24066741, 24172133, 24853639, 24336451, 24433924, 25267672. This is a highly multi-disciplinary collaboration, connecting evolutionary biology, genomics, medical microbiology and epidemiology. PMID 28447949, 28130063, 28108681, 27427203 |
| Start Year | 2010 |
| Description | Murdoch University, Perth, Australia (Dr Xiaohui Zhang) - 2015 |
| Organisation | Murdoch University |
| Country | Australia |
| Sector | Academic/University |
| PI Contribution | Econometric analysis to determine the most important drivers of healthcare expenditure growth in OECD countries using a common factor model |
| Collaborator Contribution | Analysis |
| Impact | Paper forthcoming in the journal Health Economics. |
| Start Year | 2015 |
| Description | N95 respirators and Flu Transmission |
| Organisation | University of New South Wales |
| Department | School of Public Health and Community Medicine NSW |
| Country | Australia |
| Sector | Academic/University |
| PI Contribution | Mathematical analysis of a randomized clinical trial |
| Collaborator Contribution | Our interaction with Prof MacIntyre has facilitated our research on the role of face masks and respirators in the prevention of influenza transmission. |
| Impact | MacIntyre CR; Wang Q; Cauchemez S; Seale H; Dwyer DE; Yang P; Shi W; Gao Z; et a; lPang X; Zhang Y; Wang X; Duan W; Rahman B; Ferguson N. (May 2011). A cluster randomized clinical trial comparing fit-tested and non-fit-tested N95 respirators to medical masks to prevent respiratory virus infection in health care workers. Influenza Other Respi Viruses. 5:170-179 |
| Start Year | 2011 |
| Description | NIH Pakistan |
| Organisation | National Institute of Health, Pakistan |
| Country | Pakistan |
| Sector | Public |
| PI Contribution | Analyse data |
| Collaborator Contribution | Provide sequencing data and surveillance data |
| Impact | N/A |
| Start Year | 2016 |
| Description | NIHR HPRU in Modelling Methodology at Imperial College London (2014) |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Theme Leader on HIV & STIs Theme in NIHR HPRU in Modelling Methodology |
| Collaborator Contribution | Scientifc collaboration & data collection. |
| Impact | Too early to report scientific impacts. |
| Start Year | 2014 |
| Description | NIRS Queensland |
| Organisation | QIMR Berghofer Medical Research Institute |
| Country | Australia |
| Sector | Academic/University |
| PI Contribution | Providing technical support and specialist knowledge |
| Collaborator Contribution | Data and field expertise |
| Impact | not known |
| Start Year | 2017 |
| Description | NTI India - 2015 |
| Organisation | National Tuberculosis Institute (India) |
| Country | India |
| Sector | Private |
| PI Contribution | Hosted Dr.Vineet Chadha (leading TB epidemiologist in India) over a series of discussion meetings in Delhi, from which one manuscript is now in review and another in preparation. |
| Collaborator Contribution | Co-authored papers under review |
| Impact | One paper in review, one paper to be submitted. |
| Start Year | 2015 |
| Description | National Institute for Research on TB in India (NIRT) |
| Organisation | National Tuberculosis Institute (India) |
| Country | India |
| Sector | Private |
| PI Contribution | Project relates to TB control in Chennai and the collaboration is about modelling impact of interventions |
| Collaborator Contribution | Data analysis and model design |
| Impact | Grant awarded |
| Start Year | 2016 |
| Description | Oliver Morgan (WHO - Acting Director Health Information Systems) |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Establishment and identification of modelling needs for situational awareness during outbreak response |
| Collaborator Contribution | Establishment and identification of modelling needs for situational awareness during outbreak response |
| Impact | too early |
| Start Year | 2016 |
| Description | Oliver Morgan, Director (WHO - Director Health Emergency Information Systems) |
| Organisation | World Health Organization (WHO) |
| Department | Health Statistics and Information Systems |
| Country | Switzerland |
| Sector | Public |
| PI Contribution | Deployment to DRC for an ebola outbreak response through the global outbreak alert response network (GOARN) |
| Collaborator Contribution | Facilitation of deployment |
| Impact | Succesful containment of the outbreak |
| Start Year | 2016 |
| Description | Oxford University - Dr Robin Thompson |
| Organisation | University of Oxford |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Leading the analysis and package development |
| Collaborator Contribution | Contribute to R-package EpiEstim and draft a manuscript describing possible application of the package to analyse outbreak data |
| Impact | N/A |
| Start Year | 2016 |
| Description | Oxford University, Centre for Tropical Medicine and Global Health - Paul Turner |
| Organisation | University of Oxford |
| Department | Health Economics Research Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Data analysis and modelling to examine the evolution of resistance in pneumococcus |
| Collaborator Contribution | Provide data |
| Impact | DOI: 10.1073/pnas.1617849114 |
| Start Year | 2016 |
| Description | Oxitec (Luke Alphey and Andy McKemey) - 2015 |
| Organisation | Oxitec Ltd |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | Experimental design, statistical analysis and dynamical modelling |
| Collaborator Contribution | Ongoing collaboration on the evaluation of genetically modified insects for use in the control of disease risks (including transmission of dengue virus) |
| Impact | PMID: 26554922 |
| Start Year | 2012 |
| Description | PANGEA (2014) |
| Organisation | PANGEA Consortium |
| Country | Belgium |
| Sector | Charity/Non Profit |
| PI Contribution | Coordination of scientific analysis |
| Collaborator Contribution | Scientific collaboration; providing data, samples & laboratory analysis/work. |
| Impact | Too early to report scientific impacts. |
| Start Year | 2014 |
| Description | PEPFAR |
| Organisation | United States Agency for International Development |
| Country | United States |
| Sector | Public |
| PI Contribution | Generating estimates |
| Collaborator Contribution | Data |
| Impact | Publications Imperial producing estimates High profile generated estimate for wold aids day for the US government |
| Start Year | 2016 |
| Description | PHE HPRU (Public Health England) - 2015 |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Modelling and new testing of new samples |
| Collaborator Contribution | Modelling and new testing of new samples |
| Impact | NIHR Health Protection Research Unit in Respiratory Infections and NIHR Health Protection Research Unit in Modelling Methodology |
| Start Year | 2012 |
| Description | PHE through MRC grant MR/J008761/1 (2013) |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Modelling |
| Collaborator Contribution | Virology |
| Impact | none yet |
| Start Year | 2011 |
| Description | Past and current plague epidemics |
| Organisation | Max Planck Society |
| Country | Germany |
| Sector | Charity/Non Profit |
| PI Contribution | mathematical modelling and epidemiological genetics |
| Collaborator Contribution | Exchange of existing data, collaborative work on epidemiological genetics modelling |
| Impact | increased understanding of Plague |
| Start Year | 2009 |
| Description | Phylogenetics and Networks for Generalised HIV Epidemics in Africa |
| Organisation | PANGEA Consortium |
| Country | Belgium |
| Sector | Charity/Non Profit |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | HIV consensus sequences for 4000 samples and corresponding sequence alignment |
| Start Year | 2013 |
| Description | Phylogenetics and Networks for Generalised HIV Epidemics in Africa |
| Organisation | University College London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | HIV consensus sequences for 4000 samples and corresponding sequence alignment |
| Start Year | 2013 |
| Description | Polio Eradication |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | surveillance data, scientific collaboration |
| Collaborator Contribution | provision of surveillance data, academic collaboration |
| Impact | 19624278, 18923171, 17448821, 17110580 |
| Description | Polio vaccine clinical trials (2014) |
| Organisation | Christian Medical College, Vellore |
| Country | India |
| Sector | Academic/University |
| PI Contribution | grant writing, scientific analysis |
| Collaborator Contribution | grant writing, scientific analysis |
| Impact | John, J., et al. (2014). "Effect of a single inactivated poliovirus vaccine dose on intestinal immunity against poliovirus in children previously given oral vaccine: an open-label, randomised controlled trial." The Lancet. |
| Start Year | 2010 |
| Description | PopART Phylogentics Study (2014) |
| Organisation | PoPART Consortium |
| Country | France |
| Sector | Academic/University |
| PI Contribution | Leadership & scientific coordination |
| Collaborator Contribution | Scientific collaboration; providing data, samples & laboratory analysis/work. |
| Impact | Too early to report scientific impacts. |
| Start Year | 2013 |
| Description | Prevention and Restriction on Anti Microbial Resistance in Pneumococcal by Multi Level Modelling |
| Organisation | Joint Programming Initiative on Antimicrobial Resistance |
| Country | Sweden |
| Sector | Public |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | Nothing yet |
| Start Year | 2017 |
| Description | ProMed |
| Organisation | International Society for Infectious Diseases (ISID) |
| Department | Program for Monitoring Emerging Diseases |
| Country | United States |
| Sector | Charity/Non Profit |
| PI Contribution | Gather data from various sources and build a model to estimate a risk of transmission of a pathogen from one country to another |
| Collaborator Contribution | Project coordination and data on case counts |
| Impact | N/A |
| Start Year | 2016 |
| Description | Public Health England (Dr Dale Weston and Dr Richard Amlot) - 2015 |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Literature review on how studies incorporate behavior into mathematical transmission models of infecticious disease |
| Collaborator Contribution | Analysis |
| Impact | Final draft of the paper under way |
| Start Year | 2015 |
| Description | Public Health England, HIV molecular epidemiology (2014) |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Analysis of HIV-1 sequence data from the UK drug resistance database |
| Collaborator Contribution | Provision of data and cleaning data. Direction of policy questions. |
| Impact | No outcomes. |
| Start Year | 2014 |
| Description | Public Health England, Tim Dallman & Amy Mikhail - collaboration on development of clustering methods for genomic outbreak surveillance |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Analysis of foodborne outbreaks data |
| Collaborator Contribution | Provided data |
| Impact | None yet |
| Start Year | 2015 |
| Description | Public health modelling (2014) |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | Infectious-disease transmission-dynamic modelling |
| Collaborator Contribution | Infectious-disease transmission-dynamic modelling |
| Impact | Multiple publications, reported elsewhere. |
| Start Year | 2009 |
| Description | Rabies and Canine Distemper |
| Organisation | Experimental Zooprophylactic Institute of the Venezie |
| Department | Research and Development (IZSVe) |
| Country | Italy |
| Sector | Public |
| PI Contribution | statistical analysis and modelling of canine distemper and rabies in Italian foxes |
| Collaborator Contribution | access to data on rabies and canine distemper virus in Italian foxes. |
| Impact | Rhodes, C. J., Donnelly, C. A., De Nardi, M. and Cattoli, G. Epidemiology of rabies and distemper infection in the fox population of north-eastern Italy. 2010c (in revision) |
| Start Year | 2010 |
| Description | Rakai Community Cohort Study (RCCS) |
| Organisation | Johns Hopkins University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Data analysis and modelling to examine the evolution of virulence in HIV |
| Collaborator Contribution | Provide data |
| Impact | DOI: http://dx.doi.org/10.7554/eLife.20492 |
| Start Year | 2014 |
| Description | Rakai Community Cohort Study (RCCS) |
| Organisation | Makerere University |
| Country | Uganda |
| Sector | Academic/University |
| PI Contribution | Data analysis and modelling to examine the evolution of virulence in HIV |
| Collaborator Contribution | Provide data |
| Impact | DOI: http://dx.doi.org/10.7554/eLife.20492 |
| Start Year | 2014 |
| Description | Read - 2013 |
| Organisation | Emory University |
| Department | Division of Infectious Diseases |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from Chlamydia trachomatis and psittaci. |
| Collaborator Contribution | Whole-genome sequencing of bacterial isolates. |
| Impact | PMID 22891032, 23532978. PMID 27633769, 27576537 |
| Start Year | 2010 |
| Description | Reconstructing the early spread of HIV in South Africa |
| Organisation | University of KwaZulu-Natal |
| Country | South Africa |
| Sector | Academic/University |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | Publication: Reconstructing the early spread of HIV in South Africa |
| Start Year | 2016 |
| Description | Review on school closure and flu pandemics |
| Organisation | European Centre for Disease Prevention and Control (ECDC) |
| Country | Sweden |
| Sector | Public |
| PI Contribution | performed the literature review and drafted the paper |
| Collaborator Contribution | collaborative interaction |
| Impact | 19628172 |
| Start Year | 2008 |
| Description | Roma Chilengi (Dr-Mr) |
| Organisation | Centre for Infectious Disease Research in Zambia |
| Country | Zambia |
| Sector | Charity/Non Profit |
| PI Contribution | Guidance and analysis of immunology data for a rotavirus study |
| Collaborator Contribution | Recruitment of infants an dstudy design for clinical trials |
| Impact | Not yet |
| Start Year | 2017 |
| Description | Sanger Institute and Wellcome Trust - 2015 |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | N/A |
| Collaborator Contribution | N/A |
| Impact | Forthcoming |
| Start Year | 2014 |
| Description | Sara Machado |
| Organisation | London School of Economics and Political Science (University of London) |
| Department | Department of Social Policy |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Managing the collaboration |
| Collaborator Contribution | expertise in experimental and behavioural economics |
| Impact | Data from final survey awaited. Likelihood check. Then apply for grant in the future to expand detail and scale of experiment (including lab experiments) |
| Start Year | 2016 |
| Description | Sarah Cleveland - Glasgow |
| Organisation | University of Glasgow |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Centre Investigator, Christl Donnelly directly involved in the design and analysis of epidemological and ecological data relating to rabies control in Tanzania |
| Collaborator Contribution | Provide data and ecological expertise |
| Impact | A PhD student, Sarah Hayes -SPH EPSRC scholarship |
| Start Year | 2016 |
| Description | Sheppard |
| Organisation | Swansea University |
| Department | College of Medicine |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from Campylobacter jejuni and coli. |
| Collaborator Contribution | Sampling of isolates, whole-genome sequencing, in vitro experiments. |
| Impact | PMID 23279096, 23818615, 24586045. PMID 28493321, 27883255, 26516092 |
| Start Year | 2010 |
| Description | Singapore Wolbachia Project |
| Organisation | National Environment Agency |
| Country | Singapore |
| Sector | Public |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | None yet |
| Start Year | 2017 |
| Description | Stellenbosch University (Prof Ronelle Burger) - 2015 |
| Organisation | University of Stellenbosch |
| Country | South Africa |
| Sector | Academic/University |
| PI Contribution | Econometric analysis of changes in hypertensive status and awareness of status in a cohort of individuals from the National Income Dynamics Survey of South Africa. |
| Collaborator Contribution | Co-author |
| Impact | Paper submitted |
| Start Year | 2015 |
| Description | Subcontract with Rathbone Medical Centre funded by MVI (2014) |
| Organisation | PATH |
| Department | PATH Malaria Vaccine Initiative |
| Country | Global |
| Sector | Charity/Non Profit |
| PI Contribution | mathematical models of data generated in the lab |
| Collaborator Contribution | generating the data in the lab |
| Impact | nothing yet |
| Start Year | 2014 |
| Description | Subcontract with Rathbone Medical Centre funded by MVI - 2015 |
| Organisation | PATH |
| Department | PATH Malaria Vaccine Initiative |
| Country | Global |
| Sector | Charity/Non Profit |
| PI Contribution | Mathematical models of data generated in the lab |
| Collaborator Contribution | Generating the data in the lab |
| Impact | PMID: 26063320, 25541384, 25597498 and other forthcoming papers |
| Start Year | 2014 |
| Description | Suerbaum - 2013 and 2014 |
| Organisation | Hannover Medical School |
| Department | Institute for Medical Microbiology |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | Statistical analysis of genomic data from Campylobacter jejuni and Helicobacter pylori. Statistical analysis of in vitro experiments in Helicobacter pylori. |
| Collaborator Contribution | Sampling of isolates, whole-genome sequencing, in vitro experiments. |
| Impact | PMID 23898187, 23836820, 25218701. PMID 28698561, 27329939 |
| Start Year | 2010 |
| Description | TB-Mac Global targets exercise (2014) |
| Organisation | Bill and Melinda Gates Foundation |
| Department | TB Modelling and Analysis Consortium TBMAC |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Exercise involved three different countries: Dr Nimalan Arinaminpathy led the and coordinated the effort from India |
| Collaborator Contribution | Coordinating the whole exercise amongst India, China and South Africa groups |
| Impact | Papers in progress; multidisciplinary collaboration with health economists |
| Start Year | 2014 |
| Description | TB-Mac Global targets exercise - 2014 |
| Organisation | Bill and Melinda Gates Foundation |
| Department | TB Modelling and Analysis Consortium TBMAC |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Exercise involved three different countries: I led the and coordinated the effort from India |
| Collaborator Contribution | Coordinating the whole exercise amongst India, China and South Africa groups |
| Impact | Papers in progress; multidisciplinary collaboration with health economists |
| Start Year | 2014 |
| Description | The Copenhagen Consensus - "TB Control in India" |
| Organisation | Copenhagen Consensus Center |
| Country | United States |
| Sector | Charity/Non Profit |
| PI Contribution | Contributed to cost-effectiveness analysis of TB interventions in two major states in India |
| Collaborator Contribution | Provide the coordination amongst the research group and dissemination of the research at political leadership level |
| Impact | A publication about the consensus to be published in April A series of meetings with the aim to launch the report and a publication in April |
| Start Year | 2017 |
| Description | The Gates Foundation PANGEA HIV Consortium - 2015 |
| Organisation | PANGEA Consortium |
| Country | Belgium |
| Sector | Charity/Non Profit |
| PI Contribution | Participated in a large simulation exercise to evaluate epidemiological inference methods |
| Collaborator Contribution | Organization of the simulation exercise |
| Impact | Publications summarising the findings of the exercise. |
| Start Year | 2015 |
| Description | Trachoma Research |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | expertise in mathematical modelling |
| Collaborator Contribution | provision of intervention study data |
| Impact | 19529762, 19333364, 17521595 |
| Description | Treating malaria in pregnancy and drug resistance |
| Organisation | Kenyan Institute for Medical Research (KEMRI) |
| Country | Kenya |
| Sector | Public |
| PI Contribution | data analysis for modelling |
| Collaborator Contribution | data collection |
| Impact | None yet. |
| Start Year | 2016 |
| Description | Treating malaria in pregnancy and drug resistance |
| Organisation | Wellcome Trust |
| Department | Malawi-Liverpool Wellcome Trust Clinical Research Programme |
| Country | Malawi |
| Sector | Academic/University |
| PI Contribution | data analysis for modelling and post doc supervision time |
| Collaborator Contribution | data collection and post doc supervision in country |
| Impact | Collaborated in successful grant application. No other impacts yet. |
| Start Year | 2016 |
| Description | UCL - Andrew Phillips , Tim Colborne |
| Organisation | University College London |
| Department | Institute For Global Health |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Modelling expertise |
| Collaborator Contribution | Statistics expertise |
| Impact | GCRF grant awarded (2017) |
| Start Year | 2016 |
| Description | UCSF School of Medicine - 2015 |
| Organisation | University of California, San Francisco |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Modelling and data analysis |
| Collaborator Contribution | Genetic analysis and clinical work |
| Impact | Project on HIV epidemiology and a publication PMID: 25542958 |
| Start Year | 2015 |
| Description | UNAIDS (HIV) - Mary Mahy and Peter Ghys |
| Organisation | Joint United Nations Programme on HIV/AIDS (UNAIDS) |
| Country | Global |
| Sector | Public |
| PI Contribution | Provide estimates for country cop planning |
| Collaborator Contribution | None so far |
| Impact | Provide estimates for country cop planning |
| Start Year | 2017 |
| Description | US Centers for Disease Control |
| Organisation | Centers for Disease Control and Prevention (CDC) |
| Country | United States |
| Sector | Public |
| PI Contribution | mathematical modelling and statistics relating to the 2009 H1N1 pandemic, seasonal influenza and the recent pertussis epidemic in the US |
| Collaborator Contribution | In exchange for our modelling and statistical expertise we have been provided with data on H1N1 pandemic influenza, seasonal influenza and pertussis. |
| Impact | Publication on the H1N1 pandemic influenza outbreak in a school in Pennsylvania (paper under revision in PNAS) |
| Start Year | 2009 |
| Description | USAID |
| Organisation | United States Agency for International Development |
| Country | United States |
| Sector | Public |
| PI Contribution | Expanding their surveillance capacity focusing on key populations (not concerned with research outputs) |
| Collaborator Contribution | Grant |
| Impact | One paper was submitted in Jan 2017 |
| Start Year | 2017 |
| Description | University of Aarhus - Thomas Bataillon |
| Organisation | Aarhus University |
| Country | Denmark |
| Sector | Academic/University |
| PI Contribution | Modelling parallel evolution in bacteria |
| Collaborator Contribution | Modelling parallel evolution in bacteria |
| Impact | DOI: 10.1002/bies.201600176 |
| Start Year | 2014 |
| Description | University of Hong Kong - 2015 |
| Organisation | University of Hong Kong |
| Department | School of Public Health and Department of Community Medicine |
| Country | Hong Kong |
| Sector | Academic/University |
| PI Contribution | Collaboration on fieldwork and analysis |
| Collaborator Contribution | Helped to win grants and publish papers |
| Impact | Several publications and successful new awards (Any paper with Dr Kendra Wu and Dr Kin On Kwok as the co-authors) |
| Start Year | 2010 |
| Description | University of Liverpool (Prof Miren Iturriza-Gomara ) - 2015 |
| Organisation | University of Liverpool |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Analysis and sequencing of the microbiota for multi-site clinical trial |
| Collaborator Contribution | Running of a clinical trial site |
| Impact | Forthcoming |
| Start Year | 2015 |
| Description | University of Liverpool - 2015 |
| Organisation | University of Liverpool |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Consultancy work for Global Fund project |
| Collaborator Contribution | Fit a transmission dynamics mathematical to a meta-analysis of published entomological studies to predict the added public health benefit of switching from standard to PBO bednets for mosquito control. |
| Impact | Applied for a new award from the Wellcome Trust via University of Liverpool, which was successful. |
| Start Year | 2015 |
| Description | University of Oxford (Prof Charles Vincent) - 2015 |
| Organisation | University of Oxford |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Econometric anlaysis of patient safety incidents/medical errors in hospitals, in particular of the number of life years lost and the cost of increased length of stay attributable to adverse events. |
| Collaborator Contribution | Sponsor of the study and co-author |
| Impact | Paper submitted |
| Start Year | 2015 |
| Description | University of Oxford (Prof Holm Uhlig) - 2015 |
| Organisation | University of Oxford |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Collaboration on Gates study |
| Collaborator Contribution | Training in flow cytometry |
| Impact | Forthcoming |
| Start Year | 2015 |
| Description | University of Oxford (Prof Pete Gething) - 2015 |
| Organisation | University of Oxford |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Working together to develop spatial estimates of AIDS statistics. |
| Collaborator Contribution | Working together to develop spatial estimates of AIDS statistics. |
| Impact | Several papers in progress |
| Start Year | 2014 |
| Description | University of Toronto (Dr Ophira Ginsburg) - 2015 |
| Organisation | University of Toronto |
| Country | Canada |
| Sector | Academic/University |
| PI Contribution | Health equity and women's cancer review for Lancet series |
| Collaborator Contribution | Co-author |
| Impact | Paper forthcoming |
| Start Year | 2015 |
| Description | University of Warwick |
| Organisation | University of Warwick |
| Department | Warwick Mathematics Institute |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Mathematical modelling to inform targeted vaccination against H1N1 pandemic influenza |
| Impact | Targeting vaccination against novel infections: risk, age and spatial structure for pandemic influenza in Great Britain. Keeling MJ, White PJ. J R Soc Interface. 2010 Oct 13. |
| Start Year | 2010 |
| Description | University of York (Prof Karl Claxton) - 2015 |
| Organisation | University of York |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Working together to understand optimal decision making in resource allocation in the face of uncertainty |
| Collaborator Contribution | Working together to understand optimal decision making in resource allocation in the face of uncertainty |
| Impact | Several papers in progress |
| Start Year | 2014 |
| Description | University of York (Prof Steve Martin) - 2015 |
| Organisation | University of York |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Econometric analysis of determinants of life expectancy, identifying what determinants have shown strongest association with life expectancy over the last 20 years. |
| Collaborator Contribution | Contributor to the analysis |
| Impact | Paper submitted |
| Start Year | 2015 |
| Description | VANTDET, PI Ajit Lalvani |
| Organisation | Imperial College London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Infectious disease modelling |
| Collaborator Contribution | Clinical data |
| Impact | too early |
| Start Year | 2014 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | Center for Infectious Disease Modeling and Analysis |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | Kaiser Permanente Washington Health Research Institute |
| Country | United States |
| Sector | Hospitals |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | London School of Hygiene and Tropical Medicine (LSHTM) |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | Penn State University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | Public Health England |
| Country | United Kingdom |
| Sector | Public |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | University of Cambridge |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine Impact Modelling Consortium-Sub-contracted modelling groups |
| Organisation | University of Oxford |
| Department | Oxford University Clinical Research Unit Vietnam (OUCRU) |
| Country | Viet Nam |
| Sector | Academic/University |
| PI Contribution | London School of Hygiene & Tropical Medicine (PIs: Mark Jit & Andrew Clark);Penn State University (PI: Matt Ferrari);Kaiser Permanente Washington Health Research Institute (PI: Mike Jackson);University of Cambridge (PI: Caroline Trotter);Centre for Disease Analysis (PI: Homie Razavi);Public Health England (PI: Emilia Vynnycky);Oxford University Clinical Research Unit (PI: Hannah Clapham). The Consortium secretariat coordinates the work of the modelling groups, and translates their disease burden estimates into vaccine impact estimates. |
| Collaborator Contribution | The subcontracted modelling groups provide disease burden estimates for a specific disease portfolio. |
| Impact | not yet |
| Start Year | 2017 |
| Description | Vaccine immune responses |
| Organisation | Antigen Discovery Inc |
| Country | United States |
| Sector | Private |
| PI Contribution | Data analysis |
| Collaborator Contribution | Data provision |
| Impact | Publication. Information on vaccine responses in a clinical trial will be available in the future. |
| Start Year | 2014 |
| Description | WHO (Malaria) Richard Cibulskis & A. Noor |
| Organisation | World Health Organization (WHO) |
| Department | Global Malaria Programme |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Generated ITN estimates for the world malaria report |
| Collaborator Contribution | None yet |
| Impact | none yet |
| Start Year | 2017 |
| Description | WHO - Global Influenza programme |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Coordinate network of scientists and provide analysis |
| Collaborator Contribution | Provide policy questions and improve data access |
| Impact | Teleconference calls between modelling group country, epidemiologists and WHO |
| Start Year | 2017 |
| Description | WHO - Laurence Cibrelus, Justus Benzler (EYE strategy - Elimination of Yellow Fever Epidemics) and going forwards William Perea |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Informing the EYE strategy to help target yellow fever vaccination in Africa for next decadeand support the Nigeria yellow fever outbreak response to target vaccination |
| Collaborator Contribution | Provide information on vaccination activities |
| Impact | Produced reports to inform Nigeria vaccination strategy Participated at EYE strategy meeting with regards to yellow fever risk mapping |
| Start Year | 2011 |
| Description | WHO - Margaret Lamunu |
| Organisation | World Health Organization (WHO) |
| Department | Department of Pandemic and Epidemic Diseases |
| Country | Global |
| Sector | Public |
| PI Contribution | Support Angola yellow fever outbreak response work by informing the vaccination strategy through modelling |
| Collaborator Contribution | Provided primarily case data from Angola and the DRC, and some local geographic data |
| Impact | 7 short reports and one report on long-term vaccination strategy, these informed decisions made by SAGE |
| Start Year | 2016 |
| Description | WHO - Vaccines for public health emergencies (FWC/IVB/IVR/IMR) |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Work is still on-going. To produce a WHO blueprint, statistical and epidemiological design and analysis plan. |
| Collaborator Contribution | Contributions to the design and plan for analysis of vaccine studies during public health emergencies. |
| Impact | Two papers submitted for WHO- Vaccines for public health emergencies Natalie E. Dean1*, Pierre-Stéphane Gsell2, Ron Brookmeyer3, Victor De Gruttola4, Christl A. Donnelly5, M. Elizabeth Halloran6,7, Momodou Jasseh8, Martha Nason9, Ximena Riveros2, Conall Watson10, Ana Maria Henao-Restrepo2, Ira M. Longini, Jr.1* Considerations for the design of vaccine efficacy trials during public health emergencies. In press (Science Translational Medicine) Natalie E. Dean1*, Ira M. Longini, Jr1, Ron Brookmeyer2, Christl A. Donnelly3, M. Elizabeth Halloran4,5, Pierre-Stéphane Gsell6, Peter W. Horby7, Martha C. Nason8, Victor De Gruttola9* Combining evidence from randomized clinical trials across outbreaks. Under review with Clinical Infectious Diseases. |
| Start Year | 2016 |
| Description | WHO - malaria vaccine cost effectiveness |
| Organisation | World Health Organization (WHO) |
| Department | Initiative for Vaccine Research |
| Country | Switzerland |
| Sector | Public |
| PI Contribution | Literature review of the cost effectiveness of delivering malaria interventions |
| Impact | Presentation to the WHO QUIVER meeting and preparation of a formal report/paper for use by the WHO Initiative for Vaccine Research unit. |
| Start Year | 2010 |
| Description | WHO Collaborating Centre |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Further to our interactions with WHO during the 2009 H1N1 pandemic, we have formalised our relationship as a Collaborating Center. |
| Collaborator Contribution | We have established a formal partnership with the leading organisation for global health and gained access to invaluable data to inform our research as well as an opportunity to interact with experts, both in country and at the WHO, working on a variety of infectious diseases. |
| Impact | Along with publications previously reported on e-Val in 2009, there have been numerous internal WHO reports (see example below) and contributions to data analysis made by the Outbreak Centre in the last year. e.g.: WHO (2010) Seroepidemiologic studies for the 2009 influenza A H1N1 pandemic. Wkly Epidemiol Rec, June, No. 24, 2010, 85, 229-236. Available at: http://www.who.int/wer/2010/wer8524.pdf The Terms of Reference for the Collaborating Center are: 1) to provide rapid analysis of urgent infectious disease problems, notably outbreaks and events of international concern. 2) to provide technical research capability in specific disease areas. 3) to provide training/capacity building in modelling 4) coordination of expertise in infectious disease modelling 5) Contribute to WHO information products as indicated and related activities in the work plan subject to WHO approval. |
| Start Year | 2009 |
| Description | WHO Ebola Response Group - 2014 |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Data cleaning and analysis; Pubmed ID 25244186 |
| Collaborator Contribution | Access to data; Collaboration on pubmed ID 25244186 |
| Impact | Pubmed ID 25244186 |
| Start Year | 2014 |
| Description | WHO GMP -2013 |
| Organisation | World Health Organization (WHO) |
| Department | Global Malaria Programme |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Collaboration on various topics - input into burden estimation, cost-effectiveness of malaria interventions, drug resistance, insecticide resistance, elimination strategies. Collaboration on scenario analysis and cost-efefctiveness for the Global Technical Strategy. |
| Collaborator Contribution | Intellectual partnership, relevant questions to support public health policy |
| Impact | PMID: 22673908; PMID: 22050911; PMID 23550770 |
| Start Year | 2011 |
| Description | WHO Gates Malaria Programme - Conteh |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Systematic review of economic factors determining access to malaira interventions |
| Collaborator Contribution | Synthesis writing and presenting at WHO |
| Impact | Presentation, report, publication in preparation |
| Start Year | 2017 |
| Description | WHO South East Asia (SEARO). TB Modelling and Control Priorities. |
| Organisation | World Health Organization (WHO) |
| Country | Global |
| Sector | Public |
| PI Contribution | Presentation preparation to a ministerial meeting. Development of Mathematical Models, including health economics. |
| Collaborator Contribution | Programmatic people, crafting the message, collaborating with stakeholder |
| Impact | Dissemination of preliminary outputs among expert groups. Ministerial meeting completed in 2017. Ministerial declaration on END TB. A follow up to take place in March 2018. 1 pub in review - BMJ |
| Start Year | 2016 |
| Description | Within host diversity |
| Organisation | The Wellcome Trust Sanger Institute |
| Country | United Kingdom |
| Sector | Charity/Non Profit |
| PI Contribution | Data analysis and laboratory work |
| Collaborator Contribution | Data provision |
| Impact | Sequenced data has emerged. Work ongoing on publication. |
| Start Year | 2015 |
| Description | Worldwide Antimalarial Resistance Network / Sanofi Limited / DNDI |
| Organisation | Drugs for Neglected Diseases initiative (DNDi) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Analysis of data to estimate the profilactic effect of anti-malerials |
| Collaborator Contribution | Provided data and scientific advice |
| Impact | Forthcoming |
| Start Year | 2013 |
| Description | Worldwide Antimalarial Resistance Network / Sanofi Limited / DNDI |
| Organisation | Sanofi |
| Country | Global |
| Sector | Private |
| PI Contribution | Analysis of data to estimate the profilactic effect of anti-malerials |
| Collaborator Contribution | Provided data and scientific advice |
| Impact | Forthcoming |
| Start Year | 2013 |
| Description | Worldwide Antimalarial Resistance Network / Sanofi Limited / DNDI |
| Organisation | Worldwide Antimalarial Resistance Network |
| Country | Global |
| Sector | Charity/Non Profit |
| PI Contribution | Analysis of data to estimate the profilactic effect of anti-malerials |
| Collaborator Contribution | Provided data and scientific advice |
| Impact | Forthcoming |
| Start Year | 2013 |
| Description | Yellow Fever Collaboration - 2015 |
| Organisation | Bill and Melinda Gates Foundation |
| Department | Global Alliance for Vaccination and Immunisation (GAVI) |
| Country | Switzerland |
| Sector | Charity/Non Profit |
| PI Contribution | Estimating the impact of yellow fever vaccination in Africa |
| Collaborator Contribution | WHO - data provision on yellow fever occurance; GAVI - data on vaccination activity |
| Impact | PMID: 24800812 |
| Start Year | 2013 |
| Description | Zika - Institut Pasteur |
| Organisation | Pasteur Institute, Paris |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Investigators from the MRC Centre for Outbreak Analysis and Modelling designed the collaboration and are now overseeing it. |
| Collaborator Contribution | Training of lab techniques and provision of reagents. |
| Impact | Too early to report |
| Start Year | 2016 |
| Description | Zika - University of Santander |
| Organisation | Industrial University of Santander |
| Country | Colombia |
| Sector | Academic/University |
| PI Contribution | Investigators from the MRC Centre for Outbreak Analysis and Modelling designed the collaboration and are now overseeing it. |
| Collaborator Contribution | Serological surveys, fieldwork, and testing. |
| Impact | Too early to report |
| Start Year | 2016 |
| Description | Zika - University of Wisconsin |
| Organisation | University of Wisconsin-Milwaukee |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Investigators from the MRC Centre for Outbreak Analysis and Modelling designed the collaboration and are now overseeing it. |
| Collaborator Contribution | Serological surveys, fieldwork, and testing. |
| Impact | too early to report |
| Start Year | 2016 |
| Description | Zika Collaboration - 2015 |
| Organisation | Industrial University of Santander |
| Country | Colombia |
| Sector | Academic/University |
| PI Contribution | Modelling of the Zika virus to characterise the transmission dynamics of the first wave of Zika in Colombia |
| Collaborator Contribution | Epidemiological research on flaviviruses |
| Impact | Forthcoming |
| Start Year | 2016 |
| Description | Zika in Columbia: early characterisation of epidemiological potential |
| Organisation | Industrial University of Santander |
| Country | Colombia |
| Sector | Academic/University |
| PI Contribution | Analyse data |
| Collaborator Contribution | Processing of samples, serosurveys and analysing data |
| Impact | DOI: 10.1126/science.aag0219 |
| Start Year | 2016 |
| Description | Zika in Columbia: early characterisation of epidemiological potential |
| Organisation | Johns Hopkins University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Analyse data |
| Collaborator Contribution | Processing of samples, serosurveys and analysing data |
| Impact | DOI: 10.1126/science.aag0219 |
| Start Year | 2016 |
| Description | Zika in Columbia: early characterisation of epidemiological potential |
| Organisation | Pasteur Institute, Paris |
| Department | Laboratory for Urgent Response to Biological Threats |
| Country | France |
| Sector | Charity/Non Profit |
| PI Contribution | Analyse data |
| Collaborator Contribution | Processing of samples, serosurveys and analysing data |
| Impact | DOI: 10.1126/science.aag0219 |
| Start Year | 2016 |
| Description | Zika in Columbia: early characterisation of epidemiological potential |
| Organisation | University of Wisconsin-Madison |
| Department | Department of Pathobiological Sciences |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Analyse data |
| Collaborator Contribution | Processing of samples, serosurveys and analysing data |
| Impact | DOI: 10.1126/science.aag0219 |
| Start Year | 2016 |
| Description | i-sense |
| Organisation | University College London |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Infectious disease modelling |
| Collaborator Contribution | statisical analysis |
| Impact | presentation at isense consortium meetings, a paper in press (Influenza and other respiratory viruses) |
| Start Year | 2016 |
| Title | ClonalFrame XD |
| Description | Suite of statistical software to analyse the effect of homologous and non-homologous recombination events on bacterial genome sequences |
| Type Of Technology | Software |
| Year Produced | 2007 |
| Open Source License? | Yes |
| Impact | This suite of methods includes ClonalFrame, ClonalOrigin, GenoPlast and SimMLST. All methods are distributed freely through an internet website: http://tinyurl.com/9dhhgqj and code is open source and free under the terms of the GNU Public Licence (GPL). These tools have been used and cited in over 200 publications. |
| URL | http://tinyurl.com/9dhhgqj |
| Title | ClonalFrameML (Updated ClonalFrame) - 2015 |
| Description | ClonalFrameML can analyse hundreds of genomes in a matter of hours. It uses maximum likelihood inference to simultaneously detect recombination in bacterial genomes and account for it in phylogenetic reconstruction. |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | The software received 9 citations within the first few weeks of publication and its predecessor software package received over 500 citations. |
| URL | http://clonalframeml.googlecode.com/ |
| Title | Contributed to the methods in the software developed by UNAIDS for global AIDS statistics |
| Description | Contribution with methods |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Not known |
| Title | EPI ESTIM - 2013 |
| Description | Model of mechanisms or symptoms - human |
| Type Of Technology | Software |
| Year Produced | 2013 |
| Impact | Used for HIV & Ebola modelling |
| Title | EbolaDiagnostics - 2015 |
| Description | The software allows researchers, policy makers and public health practitioners to assess the impact of various testing strategy in the context of an Ebola outbreak. The users can explore the implication of the strategies in term of patient or transmission perceptive with the former focusing on Case Fatality Ratio and the latter focussing on the Reproduction number. |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | N/A - Published in Nature publication - http://www.nature.com/nature/journal/v528/n7580_supp_custom/full/nature16041.html |
| URL | http://tools.epidemiology.net/EbolaRDTs.jar |
| Title | Elimination Scenario Planning and Malaria Tools Software - 2014 |
| Description | Computer software to evaluate the potential impact of malaria interventions in African countries |
| Type Of Technology | Software |
| Year Produced | 2012 |
| Impact | The tool has been formally released as part of a WHO guidance document. It was applied in Rwanda in September 2014 as part of their assessment of the feasibility of malaria elimination |
| URL | http://www.who.int/malaria/publications/atoz/9789241507028/en/ |
| Title | EpiEstim (upgrade to the next version) |
| Description | A tool to quantify the transmissibility of a pathogen over time; the next version will allow to cope with epidemics where some cases are improted from animal reservoir or a different location, and allow using contact tracing data for intrinsict estimation of parameters |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Will be publically available for download |
| URL | https://github.com/annecori/EpiEstim |
| Title | EpiGen |
| Description | Software to analyse pathogen genetics |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | N/A |
| URL | https://github.com/lucymli/EpiGenR |
| Title | EpiJSON a generic JSON format for storing epidemiological data |
| Description | EpiJSON' is a flexible and standards-compliant format for the interchange of epidemiological data using JavaScript Object Notation. This format is designed to enable the widest range of epidemiological data to be unambiguously held and transferred between people, software and institutions. |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Open Source License? | Yes |
| Impact | No formal impact yet, informally there is interest at meetings when mentioned |
| Title | Epicontacts |
| Description | Visualisation and analysis of epidemiological contact networks |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | none yet |
| URL | http://www.repidemicsconsortium.org/ |
| Title | Exploration of phylogenetic tree landscapes - 2015 |
| Description | R package and web interface for exploring phylogenetic tree landscapes and detecting phylogenetic incongruence |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | This package is currently the object of publication to be submitted in 2016. |
| URL | https://github.com/thibautjombart/treescape |
| Title | Gubbins |
| Description | Method for reconstructing bacterial evolution |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Open Source License? | Yes |
| Impact | Available to the public and frequently cited in publications |
| URL | http://sanger-pathogens.github.io/gubbins |
| Title | HIV care cascade modelling tool |
| Description | Helps country program teams to understand the strengths and weaknesses of the programs that they offer for the care of people living with HIV |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | Has been used in various WHO workshops, in 23 countries |
| URL | https://jackolney.shinyapps.io/ShinyCascade/ |
| Title | Incidence |
| Description | computation and visualisation of incidence |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | none yet |
| URL | http://www.repidemicsconsortium.org/ |
| Title | Interfacing GIS layers and spatial graphs - 2015 |
| Description | R package interfacing GIS and graph algorithms to model dispersal/diffusion processes on the geographic space |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | This package has been used in a previous form for several publications aiming to infer the historical origin of anatomically modern Humans as well as infectious diseases including plague (Y. pestis) and malaria (P. falciparum). It is also used and presented in a study of T. gondii to be submitted in 2016. |
| URL | https://github.com/thibautjombart/geograph |
| Title | Malaria Tools - 2013 and 2014 |
| Description | Software interface provided to run our published transmission model |
| Type Of Technology | Software |
| Year Produced | 2013 |
| Open Source License? | Yes |
| Impact | - Malaria Tools is a user-interface to our combined intervention model for P.falciparum malaria. The model can be used to explore the impact of bednets, indoor residual spraying, mass treatment, IPTi and a pre-erythrocytic vaccine on transmision. Various options are available to define the coverage, start-time and properties of each of these interventions. - The tool was used as part of a WHO workshop for elimination scenario planning held with the Gambia & Senegal national malaria control programmes. - The tool will be released as part of the Elimination Scenario Planning Country Guidance document. The tool was reviewed by the WHO Malaria Policy Advisory Committee in 2013. It was also used by CHAI as part of an elimination planning document provided to the Haitian government in September 2013. Collaboration with WHO . www.imperial.ac.uk/malariamodelling/toolsdata |
| URL | http://www.who.int/malaria/publications/atoz/9789241507028/en/ |
| Title | Montagu |
| Description | Delivery platform to hold estimates of vaccination coverage, the impact of vaccination, to facilitate generating these estimates, to aggregate and visualise them |
| Type Of Technology | Webtool/Application |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Integral to deliver the outputs of the VIMC |
| URL | https://montagu.vaccineimpact.org/ |
| Title | OutbreakTools (Epibase) - 2013 |
| Description | epibase is the R package created during "Hackout", a hackathon for the analysis of disease outbreaks using R, which took place at the MRC Centre for Outbreak Analysis and Modeling at Imperial College, London, in January 2013. It implements essential tools for handling, visualizing, and analyzing disease outbreak data. |
| Type Of Technology | Software |
| Year Produced | 2013 |
| Open Source License? | Yes |
| Impact | The creation of epibase set up the basis of a new framework for disease outbreak analysis using free, open-source software. It gathered a community of worldwide experts in infectious disease modelling, statistics and bioinformatics working collectively on its development. It is also an essential piece of episerve, a new web-based platform for the collection and analysis of disease outbreaks, developed by Thibaut Jombart and David Aanensen, in collaboration with the Alert & Response Team at WHO. |
| URL | https://sites.google.com/site/therepiproject/r-pac/about |
| Title | Outbreaker - 2013 |
| Description | outbreaker is a new approach for reconstructing densely sampled epidemics and inferring transmission trees ('who infected whom') from pathogen genomic sequences. It is also the first approach of this kind of be widely available as a free and open-source software. |
| Type Of Technology | Software |
| Year Produced | 2013 |
| Open Source License? | Yes |
| Impact | While the method is still under evaluation, it has already received noticeable interest from the community, with two workshops having been dedicated to its presentation the "Genepi workshop", London, UK 2013 and the "pre-ESCAIDES workshop on molecular outbreak epidemiology", Stockholm, Sweden, 2013. |
| URL | https://sites.google.com/site/therepiproject/r-pac/outbreaker |
| Title | Outbreaker 2 |
| Description | initiated new collaborations |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Development of Outbreaker2 |
| URL | http://www.repidemicsconsortium.org/outbreaker2 |
| Title | PANGEA HIV Simulator |
| Description | Simulation code - publicly available and in use (GPL 3 License) |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | facilitates ongoing research |
| URL | http://github.com/olli0601/PANGEA.HIV.sim |
| Title | PhyDyn |
| Description | Phylogenetic and Phylodynamic Inference |
| Type Of Technology | Software |
| Year Produced | 2018 |
| Open Source License? | Yes |
| Impact | PhyDyn - First public release |
| URL | https://github.com/mrc-ide/PhyDyn |
| Title | Phylogenetics with multiple genes - 2015 |
| Description | R package for phylogenetic reconstruction using multiple genes |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | This package is currently the object of an invited publication in Molecular Ecology Resource, to be submitted in 2016 |
| URL | https://github.com/thibautjombart/geograph |
| Title | RShiny app for yellow fever vaccination coverage in Africa |
| Description | App to be potentially used by WHO and other stakeholders involved |
| Type Of Technology | Webtool/Application |
| Year Produced | 2016 |
| Impact | Used by decision makers |
| URL | https://polici.shinyapps.io/yellow_fever_africa/ |
| Title | SNCdater - 2015 |
| Description | SNCdater is a method for dating a common ancestor of genetic sequences while simultaneously fitting a population shape model (ex. estimating transmission rates based on a random sample of pathogen genetic sequences) |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | No impact yet. |
| Title | SimBac -2015 |
| Description | SimBAc is whole-genome bacterial evolution simulator that is roughly two orders of magnitude faster than previous software and includes a more general model of bacterial evolution, allowing both within- and between-species homologous recombination. |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | Since methods modelling bacterial recombination generally focus on only one of these two modes of recombination, the possibility to simulate both allows for a general and fair benchmarking. |
| URL | https://github.com/tbrown91/SimBac |
| Title | Skygrowth |
| Description | Phylodynamic Inference |
| Type Of Technology | Software |
| Year Produced | 2018 |
| Open Source License? | Yes |
| Impact | Skygrowth- 1 publication in Systematic Biology New version released |
| URL | https://github.com/mrc-ide/skygrowth |
| Title | Skyspline |
| Description | Phylodynamic inference of epidemic population size and reproduction numbers given time scaled pathogen phylogenies. This package supports standard coalescent models and multi-scale coalescent models that account for within-host evolution. Methods are provided for simulating trees. Estimation of standard errors can be accomplished by likelihood profiling or parametric bootstrap. |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | increased kudos |
| URL | https://github.com/emvolz-phylodynamics/skyspline |
| Title | Super DCA |
| Description | For Genetic Analysis for detecting interacting sites |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | https://www.biorxiv.org/content/early/2017/08/30/182527 |
| URL | https://www.biorxiv.org/content/early/2017/08/30/182527 |
| Title | Three R packages 1- epitrix 2-earlyR 3-projections (preserve case) |
| Description | Tools for early outbreak assessment |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Used in training |
| URL | http://www.repidemicsconsortium.org/projects/ |
| Title | TransPhylo |
| Description | Reconstructs transmission networks using genomic data |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | none yet |
| URL | https://github.com/xavierdidelot/TransPhylo |
| Title | Transphylo |
| Description | Reconstructs transmission networks using genomic data |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | Available to the public. Expected future use in publications. |
| URL | https://github.com/xavierdidelot/Transphylo |
| Title | Treedater |
| Description | Fast molecular clock dating of phylogenetic trees with rate variation |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | Fast molecular clock dating of phylogenetic trees with rate variation |
| URL | https://github.com/emvolz/treedater |
| Title | Treedater |
| Description | Phylogenetics |
| Type Of Technology | Software |
| Year Produced | 2018 |
| Open Source License? | Yes |
| Impact | Treedater- 1 pub in Virus Evolution New version released |
| URL | https://github.com/emvolz/treedater |
| Title | Treewas |
| Description | A phylogenetic tree-based approach to genome-wide association studies in microbes |
| Type Of Technology | Software |
| Year Produced | 2016 |
| Open Source License? | Yes |
| Impact | Available to the public. Expected use in future publications. |
| URL | https://github.com/caitiecollins/treeWAS |
| Title | multilocusNFDS |
| Description | Modelling the impact of vaccination on bacterial populations |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Meeting with Public Health England to discuss use with UK surveillance data; 1 paper published in Nat. Ecol. Evol. |
| URL | https://www.ncbi.nlm.nih.gov/pubmed/29038424 |
| Title | rEpiJson: tools for handling EpiJSON (epidemiological data) files - 2015 |
| Description | R package for handling and converting files with the EpiJSON format |
| Type Of Technology | Software |
| Year Produced | 2015 |
| Impact | Publication in the journal "Epidemics"; used internally by staff at PHE |
| URL | https://github.com/Hackout2/repijson |
| Title | treeWAS |
| Description | A phylogenetic tree-based approach to genome-wide association studies in microbes |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | none yet |
| URL | https://github.com/caitiecollins/treeWAS |
| Title | vimes |
| Description | vimes provides tools for integrating various types of surveillance data for detecting disease outbreak, |
| Type Of Technology | Webtool/Application |
| Year Produced | 2017 |
| Open Source License? | Yes |
| Impact | Used in training |
| URL | http://www.repidemicsconsortium.org/vimes/ |
| Description | "Mathematical modelling of interventions against tuberculosis" presentation at Fogarty TB scientific workshop organized by the National Institute of Research in Tuberculosis (NIRT) (Pune, India) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | New ongoing collaboration with the Institute and broader network of colleagues. |
| Year(s) Of Engagement Activity | 2015 |
| Description | 2020 Vision lecture to school children |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Lecture to 500 school children at a 1 day '2020 vision' science meeting for children in London Awareness of science behind pandemic planning |
| Year(s) Of Engagement Activity | 2007 |
| Description | A practical short course on influenza and other infectious disease modelling (for WHO, Dubai) (2014) |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Public health practitioners were informed and enthused Stimulated discussions on future collaborations with WHO and wider use of modelling techniques |
| Year(s) Of Engagement Activity | 2014 |
| Description | A short scientific meeting to celebrate the opening of the MRC CLIMB Centre in Swansea, UK (22-23-Oct-2015) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Expanding professional network and stimulating questions |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www.sheppardlab.com/notmolepi2015 |
| Description | A talk in a sixth form school about career development |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | several dozen school children attended |
| Year(s) Of Engagement Activity | 2017 |
| Description | APPMGv |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Presented at the All Party Parliamentary Malaria Group at the House of Commons, where the Imperial College Malaria Network was launched. It was attended by MP's, Lords and scientists from other institutions |
| Year(s) Of Engagement Activity | 2018 |
| Description | Abingdon School - Careers evening |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Mixed group |
| Year(s) Of Engagement Activity | 2017 |
| Description | Advisory Committee on Polio Eradication |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Technical advisor Research has led to explicit immunity targets for programmes and supported use of new vaccines. |
| Year(s) Of Engagement Activity | 2006,2007,2008,2009 |
| Description | Aix-en-Provence talk to students from primary school to A-levels (Anne Cori) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | A stall at a science fair on the topic: "How can maths help understand epidemic dynamics?" |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://www.matheopolis.fr/MPT/crbst_28.html |
| Description | An introduction to infectious-disease modelling: Infectious Disease Research Network (supported by MRC Centre for Outbreak Analysis and Modelling) - 2014 |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | workshop facilitator |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Scientists were informed and enthused. Informed public health professionals: what infectious diseases modelling can and can not do; what its data requirements are; how to critically appraise models. |
| Year(s) Of Engagement Activity | 2014 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | Annual Conference of the Society of General Microbiology (2014) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Gave presentation. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | 2014 |
| Description | Article written for Significance: Heroic Sacrifice or tragic mistake? Revisiting the Eyam Plague 30 years on |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Article written for Significance magazine. Readership of 28,000 in bi-monthly magazine. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.significancemagazine.com |
| Description | Attendance at World Economic Forum, Davos |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Attended WEF meeting to talk about pandemics, emergin infections, modelling Increased awareness |
| Year(s) Of Engagement Activity | 2007 |
| Description | Badger Culling Debate - London Zoo |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | public debate on the impact of badger culling on the transmission of bovine tuberculosis http://www.zsl.org/zsl-london-zoo/whats-on/communicating-science-debate-badgers-bovine-tb,451,EV.html |
| Year(s) Of Engagement Activity | 2010 |
| URL | http://www.zsl.org/zsl-london-zoo/whats-on/communicating-science-debate-badgers-bovine-tb,451,EV.htm... |
| Description | Bath University |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Public lecture entitled, 'Epidemics - How to Control the Risks to Public Health none |
| Year(s) Of Engagement Activity | 2010 |
| Description | Big Bang - CD - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Over 1000 school children visited the MRC Centre for Outbreak Analysis and Modelling's stand, where children were 'infected' and 'vaccinated' to teach the basics of infectious disease epidemiology. none recorded |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/newssummary/news_19-3-2013-13... |
| Description | Big Bang - PW - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Over 1000 school children visited the MRC Centre for Outbreak Analysis and Modelling's stand, where children were 'infected' and 'vaccinated' to teach the basics of infectious disease epidemiology. unknown |
| Year(s) Of Engagement Activity | 2013 |
| Description | Big Push - 2013 |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Centre Investigator, Professor Tim Hallett, wrote a feature analysis for the Huffington Post as a part of their 'Big Push' campaign in partnership with The Global Fund. too early to say |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | Bill And Melinda Gates Strategy and Advisory Group |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Provided advice and influence on strategy - participated in an experts' panel |
| Year(s) Of Engagement Activity | 2017 |
| Description | Blood Safety Meeting |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Talk at an evening event increased understanding of spongiform encephalopathies to inform policy |
| Year(s) Of Engagement Activity | 2009 |
| Description | British Science Festival talks |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Presentation of Modelling Epidemics at Science Festival in Liverpool, Sept 08 increased public understanding of science |
| Year(s) Of Engagement Activity | 2008 |
| Description | CDC Plenary Talk |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | Plenary lecture at the International Conference for Emerging Infectious Diseases (Centers for Disease Control and Prevention, Atlanta, USA) none |
| Year(s) Of Engagement Activity | 2010 |
| Description | CDC Summit on HIV Prevention |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Two day workshop of key academics CDC policy document on ART as prevention |
| Year(s) Of Engagement Activity | 2009 |
| Description | Cambridge Science Festival |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Keynote/Invited Speaker |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Festival talk followed by lively discussion with the audience. http://www.cam.ac.uk/sciencefestival/files/2012/02/Cambridge-Science-Festival-2012-Programme.pdf 6pm - 7pm, 15 March 2012, University of Cambridge "Outbreak: how epidemiologists work to protect you" _ |
| Year(s) Of Engagement Activity | 2012 |
| URL | http://www.cam.ac.uk/sciencefestival/files/2012/02/Cambridge-Science-Festival-2012-Programme.pdf |
| Description | Centre for Global Development, Washington DC |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Topic - International Target Setting in Health - Ongoing |
| Year(s) Of Engagement Activity | 2017 |
| Description | Chagas-Symposium-IC 18: "How can modelling contribute to achieving the goals for Chagas disease in the horizon 2020 and beyond?" |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Chagas disease remains as a major cause of heart disease morbidity and mortality in Latin American countries. In the last three decades, most endemic countries have made great strides towards the control of Chagas disease by implementing mainly vector and blood transfusion control. However, the impact of such interventions has, by and large, not been rigorously quantified, and questions remain as how to address old and new challenges as countries progress towards the goals proposed by the World Health Organization (WHO) in the horizon 2020 and beyond. These goals aim to achieve interruption of intra-domiciliary (vectorial) transmission in all endemic countries and to have all infected/ill patients under care. However, estimates of the current status of intra-domiciliary transmission and burden of disease in endemic countries remain poorly documented, making it difficult to ascertain progress, identify areas that need strengthening, and make programmatic decisions about deploying the most cost-effective interventions. The Department of Infectious Disease Epidemiology at Imperial College London in collaboration with Princeton University and the Pan American Health Organization (PAHO) is convening a symposium funded by the Neglected Tropical Disease Modelling Consortium to define overarching challenges and research priorities, explore opportunities, develop collaborations, and build strategies towards a research agenda for rigorous mathematical modelling to help measure and inform progress on control and elimination of Chagas disease in Latin America. Specifically, discussions will be centred around the theme of how can mathematical models help to highlight country programme priorities and measure the progress made, and how can endemic countries help to inform the models and make best use of them to plan, deploy and evaluate country-specific and cost-effective interventions. The meeting will bring together representatives of international organizations, scientific researchers, programme managers, non-government and non-profit organizations, industry partners, government representatives, and community stakeholders to identify and articulate opportunities for long-term, impactful, and country-relevant collaborative research. |
| Year(s) Of Engagement Activity | 2018 |
| URL | http://www.chagas.co.uk |
| Description | Chair of UNAIDS HIV Reference Group (2014) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Developed methods for generating AIDS statistics. |
| Year(s) Of Engagement Activity | 2014 |
| URL | http://www.epidem.org |
| Description | Cheltenham Science Festival |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Talk on pandemic modelling and the H1N1 pandemic increased public understanding of the H1N1 pandemic and the role of mathematical modelling |
| Year(s) Of Engagement Activity | 2009 |
| Description | Code Club - 2015 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Ran an afterschool club for primary level pupils. |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://www.codeclub.org.uk/ |
| Description | Collaboration with Oxford Clinical Micriobiology (2014) |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | workshop facilitator |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Seminar and day of meetings. Sponsored postdoctoral fellowship application. Made plans for future meetings. Sponsored postdoctoral fellowship application |
| Year(s) Of Engagement Activity | 2014 |
| Description | College de France talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Gave presentation. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Consise meetings - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Attending two Concise workshops (Hong Kong and Cape Town) Infuenza seroepidemiology meetings to develop protocol for investigation of closed settings. |
| Year(s) Of Engagement Activity | 2013 |
| URL | https://consise.tghn.org/ |
| Description | Coordination of the H1N1 informal mathematical modelling network - WHO Engagement MVK |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Meetings, teleconferences, peer-revoewed publications Real-rime results for decision making; Results add to evidence base to make policy decisions and for future pandemic planning |
| Year(s) Of Engagement Activity | 2009,2010,2011 |
| Description | Cosy Science - Café Scientifque - Zika virus (Pierre) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | A public talk/café scientifique on the zika virus transmission and epidemiology |
| Year(s) Of Engagement Activity | 2016 |
| Description | Country-specific technical advisory groups on polio eradication |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Technical advisor Provided evidence to support decision making on vaccine use |
| Year(s) Of Engagement Activity | 2006,2007,2008 |
| Description | Crest Awards: Surpervising sixth former science project |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Visit school monthly and supervise sixth former to develop and carry out her own research project |
| Year(s) Of Engagement Activity | 2016,2017 |
| URL | http://www.crestawards.org/ |
| Description | DIDE Short Course: Introduction to Mathematical Models of the Epidemiology & Control of Infectious Diseases; An interactive short course for professionals - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | The course was organised and co-hosted by Dr Anne Cori; a core member of Centre PI Professor Christophe Fraser's HIV research group. There were approximately 40 attendees. 40 attendees. Outreach and networking with health professionals from all over the world, leading to new collaborations and the implementation of MRC Centre-developed models, techniques, and tools in health institutions across the globe. |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www.infectiousdiseasemodels.org/ |
| Description | DIDE Short Course: Introduction to Mathematical Models of the Epidemiology and Control of Infectious Diseases (2015) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Outreach and networking with health professionals from all over the world, leading to new collaborations and the implementation of MRC Centre-developed models, techniques, and tools in health institutions across the globe. |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www.infectiousdiseasemodels.org |
| Description | DIDE Short Course: Introduction to Mathematical Models of the Epidemiology and Control of Infectious Diseases - 2014 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | 40 attendees. Outreach and networking with health professionals from all over the world, leading to new collaborations and the implementation of MRC Centre-developed models, techniques, and tools in health institutions across the globe. |
| Year(s) Of Engagement Activity | 2014 |
| URL | http://www.infectiousdiseasemodels.org/ |
| Description | DNA Extraction in a primary school in London |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Showed students how to extract DNA from a strawberry |
| Year(s) Of Engagement Activity | 2017 |
| Description | Data and modelling working group. Gates Foundation, India (2014) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Decisions were reached that were important for several Gates-funded studies in India. Criteria decided upon in the meeting became part of organisational practice |
| Year(s) Of Engagement Activity | 2014 |
| Description | Department of Health Scientific Influenza Surveillance Steering Group (ISSG) PW |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | 2010-date Improvements in surveillance systems. Funding of studies to develop new surveillance systems. Revisions to pandemic planning. Bolotin et al. PLoS ONE paper. Other papers being written. |
| Year(s) Of Engagement Activity | 2010,2011,2012 |
| Description | Department of Health Scientific Pandemic Influenza advisory committee modeling sub-group (SPI-M) PW |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | 2009 - date Influence on policy Revisions to pandemic planning |
| Year(s) Of Engagement Activity | 2009,2010,2011,2012 |
| Description | Designing Phase III Trials for potential transmission blocking vaccines in malaria (2014) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Report submitted to Federal Drugs Administration (USA) based on the groups recommendations Pending FDA decision |
| Year(s) Of Engagement Activity | 2014 |
| Description | EFSA - Blue Tongue Virus |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Health professionals |
| Results and Impact | Modelling work undertaken to assess risks of movement of BTV-affected animals EFSA report & recommendations |
| Year(s) Of Engagement Activity | 2008 |
| Description | EYE strategy subgroup for risk assessment (with WHO) (also relevant to influence on policy) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | EYE strategy subgroup for risk assessment (with WHO) - participation with other academics to provide advice (to policy makers) in WHO |
| Year(s) Of Engagement Activity | 2017 |
| Description | Edinburgh Science Festival |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Presented a public lecture on Tracking Infection in the 21st Century to ~100 people at the Edinburgh Science Festival. none |
| Year(s) Of Engagement Activity | 2010 |
| Description | Estimating Yellow Fever Disease Burden in Africa - WHO Engagement MVK |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Coordination of expert panel, presentations and peer-revewed publication (in preparation) Results add to evidence base to make policy decisions |
| Year(s) Of Engagement Activity | 2011,2012 |
| Description | Estimating mortality of the influenza A H1N1 pandemic - WHO Engagement MVK |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Coordination of 30+ expert panel, face-to-face meeting in London, numerous presentations at scientific conferences and to WHO audiances, peer-reviewed publication(s) Results add to evidence base to make policy decisions and for future pandemic planning |
| Year(s) Of Engagement Activity | 2010,2011,2012 |
| Description | FAO Workshops on H5N1 in South East Asia |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Workshops in Cambodia and Thailand increased understanding of the epidemiology of H5N1 in South East Asia |
| Year(s) Of Engagement Activity | 2008 |
| Description | Glasgow Science Festival 2017 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Glasgow Science Festival, Glasgow, Scotland |
| Year(s) Of Engagement Activity | 2017 |
| Description | Global TB burden was revised in relation to 2016 paper. High degree of coverage (Daily Mail, New York Times). |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Press and media engagement following publication of TB burden paper. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://timesofindia.indiatimes.com/india/No-of-Indias-TB-patients-may-be-double-the-estimate-Lancet/... |
| Description | Guardian Q and A - 2013 |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | I wrote a non-technical Q&A article to inform the public about the scientific evidence on badger culling and bovine TB. Article appeared online and remains there as a resource. It has been tweeted among those interested in bovine TB. |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www.theguardian.com/environment/2013/oct/11/badger-cull-key-science-questions-answered |
| Description | HIV transmission elimination initiative, Amsterdam |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Coordination of current research in HIV epidemiology in Amsterdam, and advice on methodology |
| Year(s) Of Engagement Activity | 2016,2017 |
| URL | http://hteam.nl |
| Description | HPA2012 XD |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | HPA conference "Health Protection 2012" in the University of Warwick on 12th September 2012. Website URL: https://www.hpa-events.org.uk/hpa/frontend/reg/thome.csp?pageID=64783&eventID=144&eventID=144 . Title of presentation: "Whole-genome sequencing reveals limited hospital transmission of Clostridium difficile" Interest of audience shown by many questions and positive feedback at the end of the presentation. Slides of talk are available on the conference website. |
| Year(s) Of Engagement Activity | 2012 |
| Description | Harriet Code Club (2014) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | ~30 pupils each week attended a code club at a local school Positive feedback from school and good attendence |
| Year(s) Of Engagement Activity | 2013,2014 |
| URL | https://www.codeclub.org.uk/ |
| Description | Heron-Allen Lecture at Lady Margaret Hall Oxford |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Public lecture Increased awareness |
| Year(s) Of Engagement Activity | 2006 |
| Description | Highdown School - 2014 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | 200 Year 8 pupils attended a science fair. We ran an interactive stall including background poster, a demonstration game and computer-based models of influenza transmission. Informed students about malaria. The school is interested in continuing this for future years. |
| Year(s) Of Engagement Activity | 2012,2014 |
| Description | House of Lords Science Select Committee |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Presentation to select committee on pandemic flu Better understanding of potential threat and impact of responses |
| Year(s) Of Engagement Activity | 2008 |
| Description | ITM Colloquium 2014 - The Human Factor: Social Science in Global Health (24-27 November, 2014) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Patients, carers and/or patient groups |
| Results and Impact | Beyond the Clinical Trial: A Health Economics Perspective presentation as part of panel on 'Global health and clinical research: empowerment, exploitation or partnership?' Disseminate research, provoke questions and expand professional network |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www.itg.be/internet/colloq2014/index |
| Description | Imperial College CREST Academy mentors 2017-18 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | The scheme partners researchers who act as mentors to 6th form pupils undertaking the CREST Award scheme. The pupils come up with their own STEM research idea, and we, the mentors, meet with them every couple of months to discuss their approaches to research, results so far, and offer suggestions for future project directions. The scheme also exposes 6th form students to real STEM researchers, allowing students to gain insight into the diverse backgrounds of researchers and different career paths that can be followed. The students have not yet completed the project so we do not yet know what level of award they will achieve. |
| Year(s) Of Engagement Activity | 2017,2018 |
| URL | https://www.imperial.ac.uk/be-inspired/student-recruitment-and-outreach/schools-and-colleges/student... |
| Description | Imperial Festival (May 2015) |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Over 400 researchers and exhibitors Imperial College and partner institutes across the local area and the wider academic community demonstrated the livelier side of science to thousands of people throughout the weekend, following events for school children and youngsters at Imperial's Early Years Education Centre earlier in the week. The main outcome was the dissemination of research outcomes to wider public and spreading the word about the work of the Centre. |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://www.imperial.ac.uk/be-inspired/festival/about/festival-2015 |
| Description | Imperial Festival - James Hay |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Imperial Festival event development (with Harriet Mills - now at Bristol having left in 2016) |
| Year(s) Of Engagement Activity | 2016 |
| Description | Imperial Fringe - 2013 |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | Yes |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Members of the public attended the event to learn about infectious disease outbreaks through intercative activities. Not known |
| Year(s) Of Engagement Activity | 2012 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/newssummary/news_1-11-2012-13-44-43 |
| Description | Infectious Disease Genomics Symposium Beer & Pizza Science Evening (20-Oct-2015) at University College London |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Postgraduate students |
| Results and Impact | Expanding professional network, influencing younger researchers and stimulating questions |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://www.ucl.ac.uk/ugi/ugi-seminar-events-publication/beerpizzaOct1015 |
| Description | Infectious Disease Modelling Short Courses - WHO Engagement MVK |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Meeting held with WHO staff Raising awareness/education of use of mathematical modelling for decision making |
| Year(s) Of Engagement Activity | 2009,2010,2011,2012 |
| Description | Interview on Radio 4 programme Material World - Badger Culling |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | http://www.bbc.co.uk/programmes/b012r7tk none |
| Year(s) Of Engagement Activity | 2011 |
| Description | Intl Union Against TB & Lung Dis conference PW |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | Poster Presentation |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | International Union Against TB & Lung Disease conference, London, 4-6 July 2012. https://www.hpa-events.org.uk/hpa/frontend/reg/thome.csp?pageID=56137&eventID=125&eventID=125 (1) Tackling TB in the Age of Austerity: is the London TB Find & Treat service cost-effective? Peter J White, Mark Jit, Helen R Stagg, Robert W Aldridge, Ibrahim Abubakar; (2) Tailoring tuberculosis interventions in different hard-to-reach population settings to ensure valuable resources are used cost-effectively. T Mugwagwa, M Jit, H Stagg, L Pimpin, Y Choi, A Hayward, A Story, R Aldridge, J Lord, I Abubakar, P White Too soon to say |
| Year(s) Of Engagement Activity | 2012 |
| Description | Introduction to Infectious Disease Modelling Course for 6th form pupils (April 2015) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Raising awareness on the practical use of mathematics; Influencing young students and sharing scientific information |
| Year(s) Of Engagement Activity | 2015 |
| Description | Introduction to Infectious Disease Modelling to inform policy making (April 2017) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Raising awareness on the practical use of mathematics and modelling to inform policy |
| Year(s) Of Engagement Activity | 2017 |
| Description | Introduction to Infectious Disease Modelling to inform policy making (Mar 2016) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Day-long workshop on infectious disease epidemiology hosted by MRC Centre Investigators and with a focus on influencing policy making. Attended by ~100 public health practitioners, students, and researchers. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Invited talk at Society for Molecular Biology and Evolution Meeting |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Invited talk at Society for Molecular Biology and Evolution Meeting |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.pneuomogen.net/smbe |
| Description | Invited to a school as a STEM Ambassador (secondary) - March 2018 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Gave a talk about Mathematics as a career and about infectious diseases |
| Year(s) Of Engagement Activity | 2018 |
| Description | Isaac Newton Institute lecture - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Attended by about 50 researchers and invited guests - but the talk was widely advertised and tweeted. The talk was live streamed and available online afterwards so was available to the wider public. The talk was reported in an article in the Sunday Times newspaper. http://www.thesundaytimes.co.uk/sto/news/uk_news/Environment/article1310810.ece |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www.newton.ac.uk/programmes/IDD/special_lecture |
| Description | KoR Primary School visits NG |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | This in collaboration with the illustration company "House of illustration", where we taught children about micro-organisms, through art and scientific facts about each example. I helped develop the ideas with the illustrator, who visited the school ~6 times. I ensured that the micro-organisms chosen were relevant and there would be learning outcomes for the children. I also visited the school twice, gave a short lesson and practical and helped with the children's activities Presentation was made to 2 classes of school children (KS2, age ~8). Hands on demonstration of the use of microscopes, which involved looking at swimming Artemia, and fungi. Children were very excited about seeing live animals and fungi under the microscope and on the projector. One child commented with certainty that she was going to be a parasitologist when she was older, once I told her what the name was of someone that looked at worms! |
| Year(s) Of Engagement Activity | 2012 |
| Description | Life Festival - SR - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Over 1200 visitors attended the MRC centenary 'Life Festival' at the Science Museum. Through participation in our games and activities visitors learned about the concepts of infection, vaccination, and herd immunity. 97% of event visitors rated their experience as 'positive', with many visitors leaving specific positive feedback about our activities. |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | Life Festival - WH - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | Over 1200 visitors attended the MRC centenary 'Life Festival' at the Science Museum. Through participation in our games and activities visitors learned about the concepts of infection, vaccination, and herd immunity. 97% of event visitors rated their experience as 'positive', with many visitors leaving specific positive feedback about our activities. |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | MALEra Modelling Group |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | Development of research agenda for modelling for malaria eradication White Report Due 2010 |
| Year(s) Of Engagement Activity | 2008 |
| Description | MIDAS Dynamics of Preparedness conference PW |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | MIDAS Dynamics of Preparedness conference, Pittsburgh, 22-24 October 2012. https://midas.pitt.edu/index.php?option=com_fabrik&view=form&formid=20&Itemid=473 Performance of England's National Pandemic Flu Service in mass treatment and rapid surveillance. Peter White, Tom Nichols, Barry Evans, Richard Pebody, André Charlett, Gillian Smith, Xu-Sheng Zhang, Neil Ferguson Too soon to say |
| Year(s) Of Engagement Activity | 2012 |
| Description | MRC Life Fesitival (2013) |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | The MRC Centre for Outbreak Analysis and Modelling joined several London-based MRC Centres to collaborate with theatre company Non Zero One and the Science Museum to deliver "LIFE: a healthy game of chance and choice" to launch the MRC Centenary Open Week in June 2013. Members of the public attended the event to learn about infectious disease outbreaks through intercative activities. Not known |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | Malaria No More Events in Parliament - 2014 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Stall as part of an event organised by Malaria No More to engage politicians with the need for the UK to continue to support global malaria programs. We ran a computer game in which the MPs were asked to allocate the UK malaria budget to different interventions and see how many lives they saved. Engaged with politicians |
| Year(s) Of Engagement Activity | 2014 |
| Description | Masterclass in Mathematics - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | The Royal Instititution organises Saturday morning maths Masterclasses for 50-60 year 9's from schools in London. The Masterclass Harriet teaches on is called "Networks Rule the World" and covers epidemic spread on networks. The children learn how the structure of contact networks can influence disease spread, how vaccination works and how travel and transport networks can influence disease spread. http://www.rigb.org/education/masterclasses Each session has received positive feedback from the children and helpers involved. The children have been very engaged with the session, with many being inspired by the use of mathematics on a "real world" and easily relatable problem. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Media Interviews |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Numerous interviews by all MRC Outbreak Centre staff to the media (e.g. Times, Guardian, Telegraph, Radio 4, BBC News, Sky, ITN) increased public understanding of infectious disease modelling and epidemics/pandemics |
| Year(s) Of Engagement Activity | 2008,2009 |
| Description | Microbial source attribution using genetic data workshop |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Source attribution workshop at Imperial. People from around the world came to discuss and present upon the subject. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://whoinfectedwhom.org/ |
| Description | Mobile pathogens in a changing world: impacts on ecosystem, human and wildlife health - Grantham Institute (June 2015) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | This public lecture was recorded and made accessible online. Broaden professional network. |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/naturalsciences/climatechange/eventssu... |
| Description | Modelling Course, Delhi (2014) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Centre members ran a modelling course in Delhi in collaboration with the Public Health Foundation India. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Modelling options for enhanced malaria control and elimination in Bioko Island |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Talk to program managers, companies and the program funder Marathon Oil followed by questions and discussion. ~ 30 participants none |
| Year(s) Of Engagement Activity | 2011 |
| Description | Models for malaria control and elimination |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Presentation to Global Malaria Program staff, ~15 participants none |
| Year(s) Of Engagement Activity | 2011 |
| Description | NIH Workshop (November 2015) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | National Institute of Allergy and Indecticious Disease (USA) workshop: Infectious Disease Research: Quantitative Methods and Models in the era of Big Data; Presentation title: Scalable Phylogenetic and Phylodynamic Inference in the Era of Big Data; November 9-10, 2015. The NIH meeting generated a publicly available presentation describing our recent work on statistical methods for analysing pathogen genetic data. This meeting also fostered collaborations between contributors to the workshop. Volz initiated a new collaboration with Marc Suchard (Professor of Statistics, University of California Los Angeles) to improve on the methods presented at the meeting. |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://respond.niaid.nih.gov/conferences/infectiousdiseaseresearch/pages/agenda.aspx |
| Description | NIHR HPRU Open Day (5 March, 2015) |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Three National Institute for Health Research Health Protection Research Units (NIHR HPRUs) based at Imperial College London organzied their first joint open day. Following the talks, guests were invited to speak to researchers about their work and take part in interactive displays, including a game showing how infection can spread and growing bacteria from fingertip swabs. |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/departmentofmedicine/healthpr... |
| Description | Northampton High School - Global health and career opportunities in the field |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Talk about various career opportunities in the field of global health to school pupils |
| Year(s) Of Engagement Activity | 2016 |
| Description | Oxford Cherwell talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | 100 students in attendance. Too soon to say |
| Year(s) Of Engagement Activity | 2013 |
| Description | Oxford talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Gave presentation. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Pandemic Influenza workshop at the Science Museum (31 July 2015) - INfluENCE Project (Department of Health) |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Discuss and disseminate research outcomes of the project with stakeholders from across the government and commercial organizations, but also with members of public. Discussion of effective messaging, behaviour change and communication and the research on the National Pandemic flu service. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Panelist Centre for Global Development, Washington DC - Hauck |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | How to incorporate economic evaluation in WHO guidelines and target setting? |
| Year(s) Of Engagement Activity | 2017 |
| Description | Panelist at the web summit Lisbon - Hauck |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Is Medicine a legal right? |
| Year(s) Of Engagement Activity | 2017 |
| Description | Participation in WHO Initiative for Vaccine Research |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | ~30 attendees, questions, discussion White MT, Conteh L, Cibulskis R, Ghani AC (2011). Cost and cost-effectiveness of malaria control interventions - a systematic review. Malaria Journal, 10:337 |
| Year(s) Of Engagement Activity | 2011 |
| Description | Plenary talk at the International Symposium on Pneumococcai and Pneumococcal Diseases |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Industry/Business |
| Results and Impact | Invited to give a plenary talk at the International Symposium on Pneumococcai and Pneumococcal Diseases |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.isppd2016.kenes.com |
| Description | Presentation at Institut Pasteur in Paris (also relevant for award /recognition or last section outputs) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Professional Practitioners |
| Results and Impact | Research Presentation on the VIMC to academics and students of the institute, to raise awareness and educate about the research |
| Year(s) Of Engagement Activity | 2017 |
| Description | Presentation to WHO China |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Talk on the use of modelling for determining vaccination strategy |
| Year(s) Of Engagement Activity | 2016 |
| Description | Presentation to parliament: pandemic flu |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Presentation to cross-party group on pandemic flu (incl SofS DH and shadow) Better understanding of potential threat and impact of responses |
| Year(s) Of Engagement Activity | 2008 |
| Description | Presentation to the Gates Foundation leadership |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Supporters |
| Results and Impact | Advising the Gates Foundation leadership on the Foundation research priorities for the next 5 years |
| Year(s) Of Engagement Activity | 2016 |
| Description | Presenting current understanding of the problems of insecticide resistance for malaria control to funding bodies (Gates Foundation) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Supporters |
| Results and Impact | Presenting current understanding of the problems of insecticide resistance for malaria control to funding bodies (Gates Foundation). |
| Year(s) Of Engagement Activity | 2016 |
| Description | Press interviews re Dengue Vaccine - international scientific press and mainstream media |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Press interviews re Dengue Vaccine - international scientific press and mainstream media with international reach. |
| Year(s) Of Engagement Activity | 2017,2018 |
| URL | https://www.reuters.com/article/us-sanofi-dengue-science-insight/did-sanofi-who-ignore-warning-signa... |
| Description | Press release issue |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Issued a press release for publication in PLoS Medicine of paper entitled "Quantifying the fitness benefit and cost of cefixime resistance in Neisseria gonorrhoeae to inform prescription policy: A modelling study". |
| Year(s) Of Engagement Activity | 2017 |
| Description | Public Health Foundation of India (PHFI) - 2013 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Delivering a mathematics course workshop at PHFI too soon to say |
| Year(s) Of Engagement Activity | 2013 |
| Description | Public Lecture at Imperial (Riley) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | The friend's of Imperial Lecture series |
| Year(s) Of Engagement Activity | 2018 |
| Description | Public Lecture in Cardiff |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Neil Ferguson public lecture at Cardiff University increased public understanding of science |
| Year(s) Of Engagement Activity | 2008 |
| Description | Public choice analysis of priority setting in health, presentation at the roundtable meeting 'Political Economy of Priority Setting in Health', Center for Global Development, Washington, D.C., February 2015 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Expanding the network of collaborators. A working paper published based on the presentation in partnership with someone present at the event. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Public lecture Biosys, Copenhagen |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | public lecture none |
| Year(s) Of Engagement Activity | 2008 |
| Description | RAPIDD (Research and Policy for Infectious Disease Dynamics) Evoluiton Meeting (Cambridge) - 2015 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Marc Lipsitch, Colin Russell and Steven Riley as key organizers. Exchange of scientific ideas, and draft paper to describe the potential and predict evolution. |
| Year(s) Of Engagement Activity | 2015 |
| Description | RAPIDD (Research and Policy for Infectious Disease Dynamics) workshop on Gravity Models, Disease Spread, and Spatial Scales (Cambridge University) (Sept 7-9, 2015) |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Main goal was exchange of scientific ideas; outcome new collaborations with participants |
| Year(s) Of Engagement Activity | 2015 |
| Description | RAPIDD workshop - 2013 |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | workshop facilitator |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Member of organising committee, helped select participants and organise the workshop. Gave a 30 minutes presentation on "Recombination and association mapping in bacteria", University of Glasgow, 4th September 2013 Very successful workshop as evidenced by good attendence and discussions. |
| Year(s) Of Engagement Activity | 2013 |
| Description | RSS Journalists Day, December 2010. |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Audience - ~50 journalists with Q&A follow-up contact from 2 journalists |
| Year(s) Of Engagement Activity | 2010 |
| Description | Radio Interbiew on BBC 4 - Inside Science with Adam Rutherford |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Public/other audiences |
| Results and Impact | Weekly scientific magazine programme: marking major developments and major scientific breakthroughs to help the audience better understand the scientific process and scientific disciplines. |
| Year(s) Of Engagement Activity | 2016 |
| URL | http://www.bbc.co.uk/programmes/b036f7w2 |
| Description | Rapid Response to events of international concern - WHO Engagement MVK |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Type Of Presentation | Paper Presentation |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | We provided summary results for internal WHO use; peer-reviewed publications; technical expertise in teleconferences with other experts, etc. Real-rime results for decision making; Results add to evidence base to make policy decisions and for future pandemic planning |
| Year(s) Of Engagement Activity | 2009,2010,2011,2012 |
| Description | Royal Institution Masterclasses for Year 9s |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Schools |
| Results and Impact | Organized a special class/experience for students on the theme of epidemics and networks. To engage students with mathematics and its application. |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www.rigb.org/education/masterclasses |
| Description | Royal Society - Computational Frontiers |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Participants in your research and patient groups |
| Results and Impact | Plenary lecture at Royal Society meeting on Computational Frontiers in Science none |
| Year(s) Of Engagement Activity | 2010 |
| Description | Royal Society - Pandemic Flu |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Health professionals |
| Results and Impact | Plenary lecture at a Royal Society Conference on Pandemic Influenza none |
| Year(s) Of Engagement Activity | 2010 |
| Description | Royal Society Café Scientifique AG |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Keynote/Invited Speaker |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | An informal discussion on a set topic. I gave a 10 minute introduction and then there was a 1 hour discussion involving around 25 members of the general public. _ |
| Year(s) Of Engagement Activity | 2012 |
| Description | Royal Society Discussion Meeting CF |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Royal Society Discussion Meeting and Kavli Symposium Meeting, "Next-generation molecular and evolutionary epidemiology of infectious diseases' 14-17 May, London and Kavli. Led to editing a special issue of Philosophical Transactions of the Royal Society Series B, in production. |
| Year(s) Of Engagement Activity | 2012 |
| Description | Royal Society Meeting in collaboration with Christian Medical College (CMC) - 2015 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | Discussions around biological challenges to effective vaccines in the developing world. Sharing latest research, new collaborations and disseminating research outcomes. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Royal Society Workshop XD |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | Keynote/Invited Speaker |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | Royal Society Workshop on "Next-generation epidemiology of infectious disease", taking place in Chicheley Hall, Buckinghamshire on 15-17th May 2012. Website URL: http://royalsociety.org/events/2012/epidemiology-infectious-disease/ . Title of presentation: "Microevolution in Clostridium difficile genomes reveals limited hospital transmission" Interest of audience shown by many questions and positive feedback at the end of the presentation. Audio recording of talk available on the conference website. |
| Year(s) Of Engagement Activity | 2012 |
| Description | Royal Society of Tropical Medicine and Hygiene - debate on the non-specific effects of vaccines (Sept 2016) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Had to take the opposing side on the issue of vaccines having strong non-specific effects |
| Year(s) Of Engagement Activity | 2016 |
| Description | Royal Statistical Society |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | One day workshops on statistics for journalists none |
| Year(s) Of Engagement Activity | 2007,2008,2009 |
| Description | SAGE Working Group on Polio vaccines |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | member of committee Will produce WHO position paper on polio vaccines |
| Year(s) Of Engagement Activity | 2008,2009 |
| Description | SEAC |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Provide scientific advice on Spongiform Encephalopathy epidemiology government reports and policy recommendations |
| Year(s) Of Engagement Activity | 2007,2008 |
| Description | SMBE2012 XD |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | No |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Conference of the Society of Molecular Biology and Evolution taking place from 23rd to 27th June 2012 in Dublin, Ireland. I was organising a symposium on Microbial Genome Evolution, which involved inviting keynote speakers, selecting contributed presentations, chairing the symposium, selecting poster contributions, etc. This symposium was very successful as shown by high levels of attendence (in spite of other symposia running in parallel) and fruitful discussions that followed. |
| Year(s) Of Engagement Activity | 2012 |
| Description | School Talk NG - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | Fitzjohn's Primary School talk on Infectious Diseases, with microscopes practical session. 40 pupils (8-9 yrs old). none yet |
| Year(s) Of Engagement Activity | 2013 |
| Description | School presentation CF |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | 60 final year primary school pupils attended a workshop I organised centred around understanding the wonderful and sometimes dangerous world of bacteria. Generated enthusiasm, and managed to avoid embarassing my son too much. |
| Year(s) Of Engagement Activity | 2012 |
| Description | Science Media Centre |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Press briefing on H1N1 Increased public understanding of the H1N1 pandemic |
| Year(s) Of Engagement Activity | 2009 |
| Description | Science Media Centre - Seasonal Flu Briefing |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Brief presentation followed by a question and answer session. Audience: ~20 journalists. several follow-up interviews with Centre staff |
| Year(s) Of Engagement Activity | 2011 |
| Description | Science Uncovered TH |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | _ |
| Year(s) Of Engagement Activity | 2012 |
| Description | Science media centre briefing SR |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Type Of Presentation | Keynote/Invited Speaker |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | _ |
| Year(s) Of Engagement Activity | 2011 |
| Description | Seminar series at University of Pavia, Italy "Epidemiology of the 2014 Ebola outbreak in West Africa" (May 2015) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Seminar in the series on Modern and Ancient Plagues (malaria, tuberculosis, HIV and Ebola). Disseminating research outcomes and influencing younger researchers. |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://www.collegiovolta.org/articles/ebola-seminar |
| Description | Sense About Science |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Media (as a channel to the public) |
| Results and Impact | Introduction to interacting with the media none |
| Year(s) Of Engagement Activity | 2008 |
| Description | Short Course in Bogota: Epidemics Analysis, Modelling and Response |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | The course will provide an introduction to modelling and statistical techniques for analysing infectious disease epidemics. The methods presented will include tools for visualising epicurves, estimating transmissibility, deriving short term predictions of incidence, modelling infectious disease dynamics and assessing the impact of intervention strategies. The course will consist of lectures during the mornings and hands-on practical in the afternoon. All practicals will be using the R software. A basic knowledge of R will be assumed from the participants. The entirety of the course and teaching material will be in English. A certificate of attendance will be delivered upon completion of the course. |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://epicoursebogota.netlify.com/ |
| Description | Short Course in Infectious Disease Epidemiology CF |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | International |
| Primary Audience | Health professionals |
| Results and Impact | >40 Public Health Professionals (and some Academics) attended our Annual 2 week short course in infectious disease modelling. This course continues to be highly succesful, and over the years has proven to be influential due to the large number of influential 'graduates' of the course. |
| Year(s) Of Engagement Activity | 2012 |
| Description | Sources of HIV transmission in the Netherlands |
| Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Guiding future provision strategies in HIV amongst MSN |
| Year(s) Of Engagement Activity | 2016 |
| Description | Stakeholder conferences for HIV - 2015 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Meet and present to borad cross-sectional stakeholders from programme managers to policy leaders in Kenya, the DR, Botswana, Malawi, China and Brazil. Sharing actionable information, influence on country-level policy making. |
| Year(s) Of Engagement Activity | 2015 |
| Description | Summer Science NP - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | Café Scientifique (Royal Society Summer Science Exhibition). Dr Nim Pathy gave a talk on the impact of increasing globalisation upon infectious disease risk. Around 75-100 people attended the event and took active part in discussions, raising several questions about pandemics and diseases. Not known yet. |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/medicine/publichealth/mrscentreforoutb... |
| Description | Swansea talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Gave presentation. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Tackling Public Health Priorities Through the Social Determinants of Health, University of Newcastle, May 2015 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Exchange of scientific ideas. Broader network of collaborators |
| Year(s) Of Engagement Activity | 2015 |
| Description | Talk at New Hinksey Primary School, Oxford, Years 5 and 6. Rachael Tucker teacher CD |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Type Of Presentation | Workshop Facilitator |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | 30 children heard about disease transmission, how outbreaks are studied and the importance of handwashing. _ |
| Year(s) Of Engagement Activity | 2012 |
| Description | Talk at St Ebbe's Primary School, Oxford, Year 1. Mrs Godby teacher CD |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Type Of Presentation | Keynote/Invited Speaker |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | 30 children heard about 'germs', transmission and the importance of handwashing. _ |
| Year(s) Of Engagement Activity | 2012 |
| Description | Talk at UNION Conference at end of 2016 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Other audiences |
| Results and Impact | presentation |
| Year(s) Of Engagement Activity | 2016 |
| Description | Talk to All-Party Parliamentary Group on AIDS, TB and Malaria - 2014 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Presentation to parliamentarians and other interested groups on the progress towards malaria elimination Informed parliamentarians and other interested groups |
| Year(s) Of Engagement Activity | 2014 |
| Description | Taming the BEAST 2017 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Professional Practitioners |
| Results and Impact | Teach how to use the software BEAST |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://www.lshtm.ac.uk/newsevents/events/taming-beast-2017 |
| Description | Technology Strategy Board Oxford - 2013 |
| Form Of Engagement Activity | Scientific meeting (conference/symposium etc.) |
| Part Of Official Scheme? | Yes |
| Type Of Presentation | keynote/invited speaker |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Health economic assessment of diagnostics. The public health angle. The UK diagnostics forum is a government funded iniative to support private sector innovations none yet |
| Year(s) Of Engagement Activity | 2013 |
| Description | The Royal Society, London - Ebola: Inside an Epidemic (9 March, 2015) |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Share information about epidemiology of Ebola and research outcomes of recent work on the outbreak in West Africa. Audience received comprehensive information on the Ebola epidemic. |
| Year(s) Of Engagement Activity | 2015 |
| URL | https://royalsociety.org/events/2015/03/ebola-panel/ |
| Description | The UNION Conference on Lung Health (Cape Town, RSA) December 2015 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presenation on 'Pricing and market impact of new TB medicines and regimens' as part of the 'Access to TB medicines beyond 2015: the dynamics of demand and supply' panel |
| Year(s) Of Engagement Activity | 2015 |
| URL | http://capetown.worldlunghealth.org/body/Programme-2015-web.pdf |
| Description | Times profile piece on Neil Ferguson |
| Form Of Engagement Activity | A magazine, newsletter or online publication |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Times piece on prominent young(ish) scientists increased public understanding of science and scientists |
| Year(s) Of Engagement Activity | 2008 |
| Description | Training provided in malaria control to MSF country managers |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Gave lecture, workshop and ran discussion on the best way to control malaria using vector control in humanitarian settings. This will enable the audience to implement best pratice in their local settings. |
| Year(s) Of Engagement Activity | 2016 |
| Description | Training provided in malaria control to MSF country managers. |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Third sector organisations |
| Results and Impact | Presentation on malaria control |
| Year(s) Of Engagement Activity | 2017 |
| Description | U of Reading talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Talk to Department of Mathematics and Statistics, University of Reading, 7th June 2013. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | Pre-2006,2006,2013 |
| Description | UK Govt. Scientific Advisory Group for Emergencies - 2014 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | National |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Informed UK and international decision-making on responding to the West African Ebola epidemic. Improved efficiency & effectiveness of UK response in West Africa. |
| Year(s) Of Engagement Activity | 2014 |
| Description | UK HIV Molecular Epidemiology Group |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Coordination of current research in HIV epidemiology in the UK |
| Year(s) Of Engagement Activity | 2013,2014,2015,2016,2017 |
| Description | UNAIDS/WHO/SACEMA Male Circumcision |
| Form Of Engagement Activity | Participation in an open day or visit at my research institution |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Two day workshop of key academics 19901974 / UNAIDS report |
| Year(s) Of Engagement Activity | 2008 |
| Description | UNICEF, Cambodia Office |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Public/other audiences |
| Results and Impact | Presentation of research findings none |
| Year(s) Of Engagement Activity | 2008 |
| Description | WHO Global Technical Strategy Steering Committee, Regional Workshops and international advisory committee presentations - 2014 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Member of the steering committee and participant in regional workshop engaging country programmes, WHO country and regional officers and other stakeholders. The presentations made as part of the committee were used to gather feedback for the development of the strategy for malaria for 2016-2030. Development of Global Technical Strategy document |
| Year(s) Of Engagement Activity | 2014 |
| URL | http://www.who.int/malaria/areas/global_technical_strategy/en/ |
| Description | WHO HIV Guidelines Committees (2014) |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Updated WHO guidelines on HIV treatment & circumcision. |
| Year(s) Of Engagement Activity | 2014 |
| Description | WHO Patient Safety Program |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | multiple meetings, presentations and reports Leading to a global patient safety challenge on antimicrobial resistance |
| Year(s) Of Engagement Activity | 2007,2008,2009 |
| Description | WISDOM - Women in Science Doing Outstanding Mathematics |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Schools |
| Results and Impact | Girls and accompanying adults |
| Year(s) Of Engagement Activity | 2017 |
| Description | Warwick - Bovine TB |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Participants in your research and patient groups |
| Results and Impact | Participant/Instructor on a workshop on Bovine TB attended by both academics and farmers. none |
| Year(s) Of Engagement Activity | 2010 |
| Description | Warwick talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Gave presentation. Interest of audience shown by many questions and positive feedback at the end of the presentation. |
| Year(s) Of Engagement Activity | 2013 |
| Description | Wellcome Trust Conference talk - 2013 |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | Yes |
| Geographic Reach | International |
| Primary Audience | Other academic audiences (collaborators, peers etc.) |
| Results and Impact | Infectious Disease Genomics & Global Health. 16-18 Oct 2013. Cambrige. Enhancing epidemiological surveillance of HIV with molecular data. none yet |
| Year(s) Of Engagement Activity | 2013 |
| URL | http://www.hinxton.wellcome.ac.uk/advancedcourses/IDG&GHprogramme.pdf |
| Description | William Guy Lecturer - Royal Statistical Society |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Schools |
| Results and Impact | William Guy Lecturer for Royal Statistical Society 2016-17 - "Statisctics and Epidemiology, how numbers help to control diseases". Talks in schools and other events in UK and US Abingdon Prep School,Frilford, Oxfordshire Henry Box School, Whitney, Oxfordshire Mishawaka High School, Mishawaka, Indiana Walt Disney School, Mishawaka, Indiana Beal High School (Redbridge), Ilford, Essex Abingdon School (and invitations to St Helen and St Katharine girls school), Abingdon, Oxfordshire Kingston University Northern Ireland Science Festival, Belfast Wycombe High School, High Wycombe |
| Year(s) Of Engagement Activity | 2016,2017,2018 |
| URL | http://www.rss.org.uk/Images/PDF/influencing-change/2017/2017-09-15-History-William-Guy-Lecture.pdf |
| Description | Wilton Park Talk |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Talk to 2 day Foreign-Office organised meeting with policy makers from multiple countries discussing pandemic response and preparedness Better understanding of potential/actual threat of flu pandemic and impact of responses |
| Year(s) Of Engagement Activity | 2009 |
| Description | Women in maths |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Schools |
| Results and Impact | It was a talk to children year 10. Supported by the Further Maths Support Programme: |
| Year(s) Of Engagement Activity | 2017 |
| URL | http://furthermaths.org.uk/ |
| Description | World Economic Forum Davos - 2017 |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Gave a lecture and participated in an expert panel |
| Year(s) Of Engagement Activity | 2017 |
| Description | World Economic Forum Davos - 2017 presentation |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Policymakers/politicians |
| Results and Impact | Gave a lecture and participated in an expert panel |
| Year(s) Of Engagement Activity | 2017 |
| URL | https://m.youtube.com/watch?v=wrXWgNBJCL8 |
| Description | mathematical modeling of malaria at RBM/WHO Monitoring and Evaluation Research Group meeting |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Participants in your research and patient groups |
| Results and Impact | Presentation to research group members (composed of WHO, RBM and Global Fund staff, local staff involved in the resistance containment project and academic advisors/invitees followed by questions and discussion. ~ 30 participants none |
| Year(s) Of Engagement Activity | 2011 |