UK Renal Imaging Network (UKRIN): Enabling clinical translation of functional MRI for kidney disease

Lead Research Organisation: University of Nottingham
Department Name: Sch of Physics & Astronomy

Abstract

The global burden of kidney disease is significant; 10% of the world's population have chronic kidney disease (CKD). Causes of CKD include acute kidney Injury (AKI), diabetes and high blood pressure. Other risk factors include cardiovascular disease and obesity. CKD confers a large increase in cardiovascular events, cardiovascular mortality or end-stage kidney disease, with an annual estimated cost in England of >£1.5 billion. Treatment options are limited by a lack of validated methods for patient stratification and assessment of response to therapy. Magnetic Resonance Imaging (MRI) has emerged as a promising new approach for assessing, monitoring and managing kidney disease. However, the potential of MRI kidney biomarkers is underestimated and unexplored in both clinical practice and research. Numerous research studies report small numbers of patients and use different MRI methods, making results from different studies difficult to compare or extrapolate into clinical practice.
We propose to work together to tackle the challenges associated with moving renal MRI to clinical use. This Partnership proposal will capitalise on the UK Renal Imaging Network (UKRIN), an existing network of 13 UK renal MRI sites. Through the Partnership grant we aim to develop a renal MRI platform, share expertise, build capacity, and develop a harmonized approach thus enabling data sharing, and accelerating the clinical potential of renal MRI. This will facilitate larger cohort studies, providing a unique contribution to the understanding and treatment of kidney disease. This is a global 1st initiative bringing together patients, leading scientists and clinical researchers, other multidisciplinary experts, Kidney Research UK and industry scanner manufacturers. The Partnership will consolidate the UK's global pioneering role in this field; enable clinical translation of this novel technology; and continue to accelerate new technological advances. This will serve as a platform for future collaborative research programmes, including multi-site clinical studies.
Our specific objectives for the three-year Partnership grant period are to develop a platform to become a national standard for renal MRI:
1) We will share experience in renal MRI that has built up across UK sites.
2) We will organise a series of renal MRI Symposia and Workshops.
3) We will produce a set of optimised scanning protocols for renal imaging that can be used by all the UK sites. These will include: (i) relatively straightforward structural and functional renal imaging methods that can applied quickly; (ii) more advanced cutting-edge methods that require additional development work; (iii) standardised quality assurance protocols that can be used to maintain a high level of scanner performance at all sites.
4) We will develop a national image sharing and analysis platform to develop the capability to share and aggregate data acquired across UKRIN sites, and to develop analysis pipelines that are optimised for renal MRI data. This will follow the template currently employed by the Dementias Platform UK (DPUK), using the open source XNAT informatics software. We will also facilitate links with the UK Renal Registry.
This proposal will establish a standard of renal MRI measures by creating and validating a platform to form the national guide. These new functional non-invasive renal MRI methods will allow various different renal aspects of each kidney to be assessed independently, with results reflecting instantaneous kidney function, rather than the metabolic consequences over time. Imaging the kidney using MRI methods has the potential to improve the management of kidney patients through better diagnosis, better assessment of prognosis and the effect of therapy, and accelerating new drug discovery. The Partnership grant will address key areas of governance, patient engagement, business development and exploitation all supported by an integrated communications plan.

Technical Summary

We propose an MRC Partnership to build on the UK's pioneering role in the development and standardisation of renal MRI. This will bring together MR physicists, radiologists, and nephrologists from major UK renal MRI research centres to create a platform for sharing expertise, building capacity, resolving challenges in data acquisition and analysis, and providing support for data sharing. Once established, this will provide technical support and shared databases of normative data to enable clinical validation through multi-centre studies.
The Partnership Grant will allow us to:
1) Build capacity and enhance the UK's expertise in renal MRI, sharing expertise across the three main MR vendor platforms, and delivering a programme of network activities including Workshops and Symposia.
2) Produce a series of optimised and harmonized protocols for renal MRI comprising: (i) "standard" sequences (BOLD R2*, diffusion-weighted imaging, T1 and T2-weighted images, angiography and phase contrast MRI, T1 mapping); (ii) more advanced protocols (such as arterial spin labelling and magnetic resonance elastography); (iii) quality control protocols.
3a) Set up a Data Analysis Centre (DAC) to develop and validate a software framework for processing multi-parametric renal MRI data. This will support future clinical studies using renal MRI in study design and setup, and image quality assurance and processing.
3b) Develop a centralised platform for data sharing and analysis using the framework of the Dementias Platform UK (DPUK) national XNAT-based informatics platform.
4) Demonstrate the Partnership capability by performing a "travelling kidney" study and collecting a normative data set of subjects, providing data for testing within- and between-site reproducibility across the three MR vendors.
5) Ensure that the UK MR research community can exploit investment in renal MRI and provide sustainability through the establishment of the UKRIN Strategy Board.

Planned Impact

The MRC has recently invested heavily in MR equipment through the Clinical Research Infrastructure Initiative (CRII) and the Advanced Imaging Centre (AIC) in Leeds, and analysis hubs such as the Leeds MRC Medical Bioinformatics Centre, and the MRC's Dementia Platform UK (DPUK) Imaging Informatics initiative. This Partnership grant will extend the capabilities of these infrastructures in renal MRI, building on the UK's lead in this area to form a sustainable platform for future work. This will impact positively on the UK's medical technology, through working with the MR vendors, pharmaceutical sectors, ultimately leading to benefits for health and well-being.

This Partnership will benefit the following groups:

Project Staff: It will provide training/experience in renal MRI across MR vendor platforms. This will increase employability of the PDRAs, and increase the profile of UK research.

Renal medicine: Through workshops and Symposia we will share expertise across the UKRIN sites, the wider renal community, and specialists in other disciplines such as histopathology and cardiology. This will highlight the potential of renal MRI to clinicians who currently have no expertise in this area. UKRIN collaborates with the UKKRC's Clinical Study Groups (CSGs), ensuring accessibility across the nephrology sub-specialities. Clinicians are members of the Partnership Steering Committee to ensure the needs of the clinical community are met. Results of this Partnership will be published widely on the dedicated website and through specialist and general interest journals.

General Public: We are committed to public engagement as evidenced by the involvement in a wide range of outreach activities by the UKRIN sites. KRUK have many years of experience communicating science to lay groups including patients and patient engagement teams, carers and the general public, and through KRUK's integral role in the Partnership we will widely disseminate our findings. We will disseminate to the general public through a website hosted by KRUK, and via social media (Twitter/Facebook). Patients are also involved as key partners in the development and planning for future research that build on the outputs from this Partnership. KRUK also has an active public affairs programme engaging with parliamentarians and other key healthcare policy influencers.

Diagnostics and pharmaceutical industry: An important outcome of the Partnership is the establishment of a platform providing image acquisition and analysis support for future large, cross-site, clinical trials which will have significant impact upon human health and the pharmaceutical industry. Multi-site studies involving large cohorts are recognized as being essential if meaningful inferences are to be made at a population level. However there are significant barriers to the successful implementation of such studies. By focusing on delivering a portfolio of common protocols, coupled with the tools for data sharing and management, we will produce the infrastructure needed to enable such large scale studies to succeed.

NHS and patients: The Partnership will lead to longer-term potential benefits on patient outcome and sustainability of health care. Improved risk stratification will facilitate targeting of interventions to patients at risk, thereby reducing the proportion requiring renal replacement therapy, the most expensive component of CKD treatment. In addition, stratification of low risk patients will spare them the burden and cost of unnecessary treatment. Improved understanding of pathophysiological changes will generate insights which may lead to new treatments which benefit patients in the long term. Forming partnerships with pharmaceutical industries will help in the evaluation and development of new drugs for kidney disease, potentially allowing drugs to be evaluated in fewer participants and over shorter observation periods, resulting in substantial cost savings.

Publications

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Iglesias M (2022) Ensemble Kalman inversion for magnetic resonance elastography. in Physics in medicine and biology

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De Boer A (2022) Consensus-Based Technical Recommendations for Clinical Translation of Renal Phase Contrast MRI. in Journal of magnetic resonance imaging : JMRI

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Buchanan CE (2020) Quantitative assessment of renal structural and functional changes in chronic kidney disease using multi-parametric magnetic resonance imaging. in Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association

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Charlotte Buchanan (2019) Uk Renal Imaging Network

 
Description Application of functional MRI to improve assessment of chronic kidney disease (AFiRM study)
Amount £1,954,960 (GBP)
Funding ID NIHR128494 
Organisation National Institute for Health Research 
Sector Public
Country United Kingdom
Start 09/2020 
End 08/2027
 
Title T2-weighted Kidney MRI Segmentation Dataset. 
Description A data set comprising T2-weighted kidney images and associated masks 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact This dataset is being shared with other renal imaging groups, such as the RESPECT consortium. 
URL https://doi.org/10.5281/zenodo.4068851.
 
Description Collaboration with Gold Standard phantoms 
Organisation Gold Standard Phantoms Limited
Country United Kingdom 
Sector Private 
PI Contribution Running comparison data sets using the QASPER phantom
Collaborator Contribution Sharing results of using the QASPER phantom
Impact No formal outcomes to date - but data sets collected
Start Year 2020
 
Description Collaboration with the RESPECT consortium (comprising four University sites in EU with lead site in University of Bergamo) 
Organisation University of Bergamo
Country Italy 
Sector Academic/University 
PI Contribution Sharing of imaging protocols and datasets
Collaborator Contribution Input to future data sharing of harmonised data sets
Impact Sharing of data sets and protocols. Output publications
Start Year 2021
 
Description Quality in Organ Donation (QUOD) 
Organisation University of Oxford
Department Quality in Organ Donation
Country United Kingdom 
Sector Academic/University 
PI Contribution Development of protocols for ex-vivo imaging
Collaborator Contribution Access to discarded organs for ex-vivo imaging
Impact Compiling grant application
Start Year 2019
 
Title Renal Segmentor 
Description Machine learning segmentor to compute total kideny volume 
Type Of Technology Software 
Year Produced 2021 
Impact Data being applied to a number of multicentre studies including CMOR and AFIRM studies 
URL https://www.nottingham.ac.uk/research/groups/spmic/research/renal-mri-group/advanced-imaging-analysi...
 
Title UKRIN Kidney Analysis Toolbox. UKRIN-MAP 
Description Software developed for renal MRI analysis and made available as open source code 
Type Of Technology Software 
Year Produced 2020 
Impact Analysis of data across 3 main MRI vendors - Philips, Siemens and GE. Software shared across renal community. 
 
Description 3rd International Symposium on Functional Renal Imaging - organised by UK Renal Imagin Network 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact he symposium will be held from 15th -17th October at the East Midlands Conference Centre, University of Nottingham, UK.

The symposium brought together scientists and clinicians from several disciplines, in a unique attempt to shape the future of renal functional imaging. It provided an overview of cutting edge clinical and pre-clinical renal imaging techniques, and explored the clinical relevance of renal imaging, the future directions of renal functional MR, and the harmonization of these approaches with clinical applications.

It provided a platform for engagement with colleagues and peers, and fostered the development of local, national and international collaborations to explore multi-disciplinary imaging approaches. The symposium attracted basic scientists, clinical scientists and clinicians from physiology, nephrology, radiology, internal medicine and related fields, as well as experts in imaging sciences and physics from all levels, ranging from students to advanced users and international experts.
Year(s) Of Engagement Activity 2019
URL https://www.nottingham.ac.uk/research/groups/spmic/research/uk-renal-imaging-network/3rd-renal-sympo...
 
Description Applications of Machine Learning in Renal MRI, Renal MRI Study Group Virtual Meeting 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Outline of renal machine learning methods presented to other researchers in renal MRI
Year(s) Of Engagement Activity 2022
 
Description Cardiovascular, metabolic and kidney disease: crosscutting science and best practice 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact A 1-day workshop on 'Multimorbidity and clustering of common diseases are major problems for health service providers'. This 1-day conference aimed to stimulate discussion and ideas and help set the foundation for establishing strategic partnerships to ultimately improve the health of patients with multimorbidity.
Year(s) Of Engagement Activity 2019
URL https://www.rcplondon.ac.uk/events/cardiovascular-metabolic-and-kidney-disease-crosscutting-science-...
 
Description Frontiers masterclass for the undergrads Oct 2021: Renal MRI at Nottingham: Physics, Techniques, and Clinical Applications. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Undergraduate students
Results and Impact Outline of renal research to undergraduates
Year(s) Of Engagement Activity 2021
 
Description Meeting with MR Vendors 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Meeting with MRI vendors, charity KRUK and patient representatives
Year(s) Of Engagement Activity 2019
 
Description Multi-parametric MRI in Renal Disease - British Association of MR Radiographers (http://www.bamrr.org/home) Professor Sue Francis 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Talk to the British Association of MR Radiographers on renal MR imaging, and highlight of UKRIN grant aims and future directions
Year(s) Of Engagement Activity 2018
 
Description Multiparametric MRI in Renal Disease' - Talk at the IPEM Advanced Approaches to Body MRI' on Tuesday 26th February in Liverpool - Professor Sue Francis 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Talk to the Institute of Physics and Engineering in Medicine on renal MRI
Year(s) Of Engagement Activity 2019
 
Description Press release on UKRIN maps 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Press release on UKRIN maps partnership grant: https://www.nottingham.ac.uk/news/pressreleases/2018/november/imaging-project-launched-to-transform-treatment-of-kidney-disease.aspx
Year(s) Of Engagement Activity 2018
 
Description QUOD visit to UKRIN 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Third sector organisations
Results and Impact Meeting with QUOD (The Quality in Organ Donation) to discuss wider use of imaging in organs
Year(s) Of Engagement Activity 2019
 
Description Renal imaging glomcom - MRI to assess renal tissue oxygenation and function : A bold story - panellist 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Discussion of BOLD imaging
Year(s) Of Engagement Activity 2020
 
Description Talk - The UK Renal Imaging Network and UK partnership grant - 2018 plenary meeting of the PARENCHIMA project in Prague - Prof Sue Francis 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Talk onThe UK Renal Imaging Network and UK partnership grant at the 2018 plenary meeting of the PARENCHIMA project in Prague - Prof Sue Francis
Year(s) Of Engagement Activity 2018
 
Description Talk UK Kidney Week 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact This was part of a session on 'Working together to understand fibrosis and regeneration'.
Assessing the efficacy and safety of cell therapies in preclinical models of kidney -Bettina Wilm
Working together to bridge the gap to translation - Dr Claire Sharpe, Reader in Renal Medicine, King's College London/King's College Hospital
The potential of whole organ MRI and non-invasive assessment of renal fibrosis - Professor Susan Francis, Professor of MR Physics, University of Nottingham
The patient perspective
This sparked discussion in terms of using imaging to assess fibrosis - both with clinicians and with pharma industry
Year(s) Of Engagement Activity 2019
URL http://ukkw.org.uk/wp-content/uploads/2019/04/Programme-UKKW-2019.pdf
 
Description Talk to British Chapter of ISMRM - Shefiield September 2019 - Advances in reanl MRI 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Talk on 'Advances in Renal MRI' to promote work of UKRIN-MAPS to the MR community
Year(s) Of Engagement Activity 2019
URL https://www.bc-ismrm2019.org.uk/programme
 
Description The Renal MRI Group A Whistle-Stop Tour. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Postgraduate students
Results and Impact Postgraduate and academic staff at UoN, sparked questions and discussions and increased interest within the university in renal imaging
Year(s) Of Engagement Activity 2020
 
Description The UKRIN-MAPS Harmonised Renal Multiparametric MRI Protocol presented at ISMRM Workshop on Kidney MRI (Lisbon) 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Promoted renal protocols of UKRIN project
Year(s) Of Engagement Activity 2021
 
Description UK Renal Imaging Network at QUOD Symposium 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Presentation at the Quality in Organ Donation Symposium on UK Renal Imaging Network
Year(s) Of Engagement Activity 2019
 
Description UKRIN Meeting Sheffield 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Meeting or project partners and others interested in renal MRI in UK. Outline of results to-date of UKRIN_MAPS
Year(s) Of Engagement Activity 2020
 
Description Website promoting UKRIN Partnership grant 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Website to disseminate UKRIN Partnership outcomes: https://www.nottingham.ac.uk/research/groups/spmic/research/uk-renal-imaging-network/ukrin-maps.aspx
Year(s) Of Engagement Activity 2018,2019