Aspergillus and chronic lung allograft dysfunction: an immunophenotyping approach to optimise therapies

Lead Research Organisation: Imperial College London
Department Name: Infectious Disease

Abstract

Lung transplantation is an established treatment for patients with end stage lung disease. Survival following lung transplantation is the worst out of all the solid organ transplant groups with a median survival of only 6.5 years. The two most common causes of death after the first-year post transplant are infection and chronic lung allograft dysfunction (CLAD). Aspergillus fumigatus is a mould that can cause a wide spectrum of disease from asymptomatic colonisation to life-threatening infection. Invasive aspergillosis (IA) the most severe form of infection, predominantly affects immunocompromised patients and is a particular problem after lung transplant.
Colonisation with Aspergillus has been linked to the development of CLAD in a number of studies, however a recent international multi-center study with large numbers of lung transplant recipients refuted this. We recently studied Aspergillus in our patients and contrasted colonisation and infection in patients with and without CLAD. We discovered that Aspergillus colonisation was more frequent in patients without CLAD (32.7% vs 13.7%), whereas Aspergillus infection was more frequent in patients with CLAD (18.9% vs 11.3%) and was associated with high mortality. This supports the hypothesis that colonisation may not be linked to CLAD.
Despite no clear evidence that tells us when Aspergillus colonisation is causing inflammation that may lead to the development of CLAD, clinicians treat Aspergillus aggressively due to the potential risk of CLAD. Treatment for Aspergillus colonisation and infection requires long term therapy with tri-azole drugs. These are associated with significant side effects and long term toxicity. For example, pancreatitis, hepatotoxicity and squamous cell carcinomas. Additionally, there is increasing evidence that long term use is selecting out strains of Aspergillus that are resistant to tri-azole drugs. It is important to establish whether colonisation does lead to CLAD in order to avoid unnecessary side effects of tri-azole drugs.
We propose a cross-sectional study examining blood and bronchoalveolar lavage fluid (lung washings) from patients who have had a lung transplant. Patients will be grouped according to whether they have/do not have CLAD, and according to their Aspergillus status (no aspergillus/colonised/infected). We will undertake multi-parameter immune profiling to identify specific immunological and cytokine signatures associated with Aspergillus in combination with comprehensive clinical phenotype and physiological data to establish whether these biological signatures could act as markers for severity or offer prognostic value in identification of patients likely to progress to more severe disease/CLAD. We will run Aspergillus T-cell specific mechanistic studies in parallel which will complement the multiparameter immune profiling and provide further insights into the potential mechanisms that Aspergillosis may be associated with CLAD following lung transplant.
Finally, we will start to develop a lung transplant biobank framework. The initial phase will involve the two largest lung transplant centres (Harefield & Newcastle). Data generated through this MRC-CARP award will be used for a further grant application and will form the basis for ongoing study to further understand how specific risk factors for CLAD (Aspergillosis, Gastroesophageal reflux, bacterial & viral infection, episodes of acute rejection and the development of donor specific antibodies) may contribute to the final common pathway of graft destruction/CLAD.
CLAD shares similar features with other fibrotic and alveolar degradation processes seen in chronic respiratory diseases, such as asthma, chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis, and thus provides a unique window into pathobiology common to other chronic respiratory diseases and may provide valuable insights into novel strategies with wider therapeutic utility.

Technical Summary

Technical Summary
Colonisation or infection with the major mould pathogen Aspergillus fumigatus occurs in up to 50% of lung transplant recipients, leading to accelerated chronic lung allograft dysfunction (CLAD) and increased mortality. Better understanding is required of when the presence of Aspergillus in the airway is promoting pulmonary inflammation, and how this relates to the development of CLAD. This is clinically important, because it is currently unclear whether patients with co-existing airway Aspergillus and CLAD require either antifungal therapy, immunosuppression, or both. In particular, as CLAD may be multifactorial, better assays to identify when this is driven by Aspergillus are needed.
In order to better understand the interplay between Aspergillus, pulmonary inflammation and CLAD we will undertake a cross-sectional comparative study of lung transplant patients developing CLAD in comparison to control lung transplant recipients without CLAD, comparing subgroups with pulmonary aspergillosis, Aspergillus colonisation and no Aspergillus. We will adopt the recently developed and validated multi-parameter immunophenotyping approach developed by Prof. Hayday in order to identify immunological signatures associated with Aspergillus-driven pulmonary inflammation. To underpin these immunophenotyping studies we will also undertake Aspergillus antigen-specific T cell immunophenotyping, in order to identify where a particular inflammatory pathway is being driven by Aspergillus. Together, these studies will allow us to identify which patients with Aspergillus are developing lung inflammation, and what particular immune signatures are particularly associated with CLAD. This will allow better identification of when Aspergillus is driving CLAD, allowing us to target those individuals who clearly need to be treated with antifungals. It will also provide greater insight into what immunogical pathways may require immunotherapeutic targeting in this context.
 
Description Identification of clinically relevant non-invasive biomarkers to guide duration of anti-fungal therapy for lung transplant recipients with Aspergillus infection
Amount £126,000 (GBP)
Organisation Pfizer Ltd 
Sector Private
Country United Kingdom
Start 11/2022 
End 11/2023
 
Description Metagenomics analysis of bronchoalveolar lavage in lung transplant recipenets with and without chronic lung allograft dysfunction
Amount £75,000 (GBP)
Organisation King’s Health Partners 
Sector Academic/University
Country United Kingdom
Start 02/2022 
End 02/2024
 
Description Collaboration with Newcastle University and the Freeman Transplant Institute in Newcastle. Collaboration on the mechanistic aspects of an NIHR funded study of Extra-corporeal Photopheresis in Chronic Lung Allograft Dysfunction 
Organisation Newcastle University
Country United Kingdom 
Sector Academic/University 
PI Contribution This NIHR study was set up to evaluate the efficacy of extra-corporeal photopheresis (ECP) in chronic lung allograft dysfunction (CLAD). The mechanistic aspects of the study were defined but were difficult to deliver logistically. I set up the collaboration between Newcastle University and the IMU Biosciences group with whom I am working with to deliver the MRC CARP project. These projects dovetail well and we have started to develop future funding bids that will ultimately bring both projects together.
Collaborator Contribution The main partner is Professor Andrew Fisher's team in Newcastle. He is the CI on the NIHR grant. We are working together on the mechanistic aspects of the study.
Impact Clinical trial just started
Start Year 2022
 
Description Tissue Access for Patient Benefit Collaboration - Astra Zeneca 
Organisation AstraZeneca
Country United Kingdom 
Sector Private 
PI Contribution Created research strategy and have approached AZ for support - both financial and academic
Collaborator Contribution As above
Impact In set up phase
Start Year 2023
 
Description Transatlantic collaboration with Harvard Medical School in Boston. U.S.A. 
Organisation Harvard University
Department Harvard Medical School
Country United States 
Sector Academic/University 
PI Contribution Developed a collaboration with the Boston Lung Transplant Programme based at Mass Gen in conjunction with Harvard Medical School. Havard have an interest in the effects of the microbiome on development of CLAD and have a successful pipeline of clinical, translational and basic science. I was successful in an Academy of Sciences Award to support a travel fellowship to learn about the orthotropic mouse model of lung transplant that has been developed at Harvard and we will work together to develop the pipeline to understand the effects of the Mycome on CLAD development.
Collaborator Contribution They provide the mouse model. They will also provide clinical samples to act as a validation cohort for the Immune data in CLAD (directly from the MRC work).
Impact Just commenced this work. I will travel to Boston in the Autumn. We have monthly research meetings to develop the ideas and have appointed a PhD student to this project.
Start Year 2022