Adaptive phenotypes and the barrier to introgression between ecotypes
Lead Research Organisation:
University of Sheffield
Department Name: Animal and Plant Sciences
Abstract
Even though is is now more than 150 years since Darwin's famous book, there is still much to learn about the origin of new species. The problem is fundamentally one of genetics because species are characterised by their inability to exchange genes with other species. This 'reproductive isolation' can be due to chance changes that reduce the fitness of hybrid offspring, to adaptation to different environments or to changes in habitat choice and mating behaviour that prevent the species from interbreeding. In general, it is not known which type of reproductive isolation appears first or how the different types come together to produce completely isolated species.
In this project, we propose to study two forms of winkle, a type of snail that lives on rocky coasts. One form is adapted to wave-exposed environments without crab predators (W) and the other to sheltered environments with any crabs (C). Where these environments meet, the different types can interbreed although they prefer to mate with their own type. On the Swedish coast there are many contact points between the two types which we can use as replicates. In each contact, we will examine genetic markers throughout the winkles' genomes. For some parts of the genome, we expect to see sharp changes close to the environmental boundary. These regions are experiencing partial reproductive isolation. For other parts of the genome, we expect to see little or no change because they are not connected to any traits involved in reproductive isolation. Comparing mutliple contacts gives us a very powerful way to find the parts of the genome that experience the strongest reproductive isolation.
The next question will be why each of these regions experiences reproductive isolation. To answer this question, we will determine several important characteristics of each winkle that we study genetically. The characteristics include shell size and shape, and the 'boldness' of the snail (its willingness to come out of its shell). The characters are all associated with a trade-off between adaptation to wave exposure and adaptation to crab predation. We will also measure the preference of males for different sized females and the reproductive success of females (number and development of embryos). We can then test whether genes in the regions that experience isolation contribute to variation in these important traits and so whether reproductive isolation is due mainly to adaptation, to offspring fitness or to mate choice. Some regions may not be associated with any of these traits and these will be very interesting, pointing to forms of isolation that we have not studied to date.
This will be one of the first studies to find isolated regions of the genome and to explain the sources of isolation. Therefore, it will take us a step closer to solving Darwin's 'mystery of mysteries', the origin of species.
In this project, we propose to study two forms of winkle, a type of snail that lives on rocky coasts. One form is adapted to wave-exposed environments without crab predators (W) and the other to sheltered environments with any crabs (C). Where these environments meet, the different types can interbreed although they prefer to mate with their own type. On the Swedish coast there are many contact points between the two types which we can use as replicates. In each contact, we will examine genetic markers throughout the winkles' genomes. For some parts of the genome, we expect to see sharp changes close to the environmental boundary. These regions are experiencing partial reproductive isolation. For other parts of the genome, we expect to see little or no change because they are not connected to any traits involved in reproductive isolation. Comparing mutliple contacts gives us a very powerful way to find the parts of the genome that experience the strongest reproductive isolation.
The next question will be why each of these regions experiences reproductive isolation. To answer this question, we will determine several important characteristics of each winkle that we study genetically. The characteristics include shell size and shape, and the 'boldness' of the snail (its willingness to come out of its shell). The characters are all associated with a trade-off between adaptation to wave exposure and adaptation to crab predation. We will also measure the preference of males for different sized females and the reproductive success of females (number and development of embryos). We can then test whether genes in the regions that experience isolation contribute to variation in these important traits and so whether reproductive isolation is due mainly to adaptation, to offspring fitness or to mate choice. Some regions may not be associated with any of these traits and these will be very interesting, pointing to forms of isolation that we have not studied to date.
This will be one of the first studies to find isolated regions of the genome and to explain the sources of isolation. Therefore, it will take us a step closer to solving Darwin's 'mystery of mysteries', the origin of species.
Planned Impact
While the primary beneficiaries of this research are academic scientists interested in evolutionary processes, we see two other groups of beneficiaries:
1. Policy makers and practitioners concerned with the management of biological diversity in the face of climate change. The effectiveness of management measures will be enhanced by better understanding of the process of adaptation to changing environments (both spatially and temporally), the nature of differentiation among populations and the nature of species. We propose to address this group by summarising our results and their implications in a report suitable for biodiversity management professionals, primarily aimed at a senior level in Natural England, and by an article aimed at a wider audience in a periodical such as British Wildlife.
2. The public, whose interest in biological diversity and evolution is clear but whose knowledge and undertanding of evolutionary processes is generally quite limited. We will exploit the fact that our field sites in the UK include popular holiday destinations. We will provide intepretation and demonstrations at appropriate sites where our previous experience suggest that it is easy to attract attention.
1. Policy makers and practitioners concerned with the management of biological diversity in the face of climate change. The effectiveness of management measures will be enhanced by better understanding of the process of adaptation to changing environments (both spatially and temporally), the nature of differentiation among populations and the nature of species. We propose to address this group by summarising our results and their implications in a report suitable for biodiversity management professionals, primarily aimed at a senior level in Natural England, and by an article aimed at a wider audience in a periodical such as British Wildlife.
2. The public, whose interest in biological diversity and evolution is clear but whose knowledge and undertanding of evolutionary processes is generally quite limited. We will exploit the fact that our field sites in the UK include popular holiday destinations. We will provide intepretation and demonstrations at appropriate sites where our previous experience suggest that it is easy to attract attention.
Publications
Westram AM
(2016)
Targeted resequencing reveals geographical patterns of differentiation for loci implicated in parallel evolution.
in Molecular ecology
Westram AM
(2021)
Using replicate hybrid zones to understand the genomic basis of adaptive divergence.
in Molecular ecology
Westram AM
(2018)
Clines on the seashore: The genomic architecture underlying rapid divergence in the face of gene flow.
in Evolution letters
Seehausen O
(2014)
Genomics and the origin of species
in Nature Reviews Genetics
Perini S
(2020)
Assortative mating, sexual selection, and their consequences for gene flow in Littorina.
in Evolution; international journal of organic evolution
Morales HE
(2019)
Genomic architecture of parallel ecological divergence: Beyond a single environmental contrast.
in Science advances
Le Pennec G
(2017)
Adaptation to dislodgement risk on wave-swept rocky shores in the snail Littorina saxatilis
in PLOS ONE
Koch EL
(2021)
Genetic variation for adaptive traits is associated with polymorphic inversions in Littorina saxatilis.
in Evolution letters
Johannesson K
(2017)
What explains rare and conspicuous colours in a snail? A test of time-series data against models of drift, migration or selection.
in Heredity
Hollander J
(2015)
Selection on outlier loci and their association with adaptive phenotypes in Littorina saxatilis contact zones.
in Journal of evolutionary biology
Faria R
(2019)
Evolving Inversions.
in Trends in ecology & evolution
Faria R
(2019)
Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes.
in Molecular ecology
Faria R
(2014)
Advances in Ecological Speciation: an integrative approach.
in Molecular ecology
Butlin RK
(2021)
Homage to Felsenstein 1981, or why are there so few/many species?
in Evolution; international journal of organic evolution
Butlin RK
(2013)
Pulling together or pulling apart: hybridization in theory and practice.
in Journal of evolutionary biology
Butlin RK
(2014)
Parallel evolution of local adaptation and reproductive isolation in the face of gene flow.
in Evolution; international journal of organic evolution
Bourdeau PE
(2015)
What can aquatic gastropods tell us about phenotypic plasticity? A review and meta-analysis.
in Heredity
Abbott R
(2013)
Hybridization and speciation.
in Journal of evolutionary biology
Description | Analysis of phenotypic and genetic change across sharp boundaries between different habitat types has revealed new information on the genetic basis of local adaptation. |
Exploitation Route | Our findings contribute to understanding of evolutionary change, especially speciation. |
Sectors | Environment |
Description | We have contributed to the public understanding of science through displays and activities that use local adaptation in snails to illustrate evolutionary processes. |
First Year Of Impact | 2016 |
Sector | Other |
Impact Types | Societal |
Description | SciLife National Biodiversity projects |
Amount | 618,750 kr (SEK) |
Organisation | Science for Life Laboratory |
Department | National Genomics Infrastructure |
Sector | Academic/University |
Country | Sweden |
Start | 05/2015 |
Description | Waernska Guest Professorship |
Amount | 500,000 kr (SEK) |
Organisation | University of Gothenburg |
Sector | Academic/University |
Country | Sweden |
Start | 05/2014 |
End | 06/2015 |
Description | CeMEB |
Organisation | University of Montana |
Department | Marine Sciences |
Country | United States |
Sector | Academic/University |
PI Contribution | Expertise in population genetics/genomics. Joint working. |
Collaborator Contribution | Field facilities. System expertise. Joint working. |
Impact | Tage Erlander, Waernska and SciLife funding opportunities relied on this partnership. Multiple publications also relied on the interaction. |
Start Year | 2009 |