Fire-adapted seed traits in Cerrado species
Lead Research Organisation:
Royal Holloway, University of London
Department Name: Biological Sciences
Abstract
NERC-FAPESP Seedcorn Fund Collaboration Project "Fire-adapted seed traits in Cerrado species" between RHUL (UK) and UNESP (Brazil)
Fire is a global phenomenon which together with climate shapes the vegetation of natural and agricultural land. Our interaction with fire is characterised by both positive and negative aspects for mankind. Humans have long used fire including for landscape and weed management, and as tool to improve crop growth on arable land. Controlled fire is necessary to preserve the health and stimulate rejuvenation of wildland ecosystems such as the Brazilian Cerrado, the Mediterranean, as well as UK peatland and moorland. In these fire-prone regions plant regeneration is achieved to a large extent from soil-stored plant seeds. Depending on the species, environment, season and seed properties, the germination of the soil-stored seeds may be stimulated by compounds derived from the smoke or by the fire-generated heat-shock. The aim of the project is to comparatively investigate seeds from species adapted to fire-prone regions to identify novel mechanisms underpinning fire-generated heat-shock and smoke as germination cues. The derived mechanisms will be tested as tools for weed management and crop seed enhancement.
Treatment with smoke and various smoke-derived compounds can stimulate the germination of certain weed seeds. This can be used as a weed management tool to deprive the soil from weeds prior to crop seed sowing. We however do not know why this does not work with all weed species, at all ambient conditions (temperature, seasons), and what seed structures and seed coat properties determine the effectiveness of the treatment. Smoke, various smoke-derived compounds, as well as heat-shock treatment can also improve the seed quality and performance of seedling establishment of certain vegetable crops. Again, we do not know what seed structures, seed coat properties and genes are responsible for these effects and why it only works with certain crop species. To advance our knowledge in this topic the leading seed science lab of Royal Holloway University of London (RHUK, United Kingdom) will collaborate with experts for fire vegetation management and Brazilian Cerrado species properties of Sao Paulo State University (UNESP, Brazil). The FAPESP-NERC programme is especially suited to support this collaboration based on the agreement of the two funding agencies.
In the project we will investigate seeds of different fire-adapted species to identify novel mechanisms controlling how fire-derived smoke and heat-shock affect their germination, storability, and seedling establishment. This work will be conducted using methods from different science and engineering fields (including molecular biology, microscopy/imaging, biomechanical engineering, physiology) through interdisciplinary collaboration in a comparative approach with many fire-adapted species. This approach will for example identify certain seed coat properties or certain genes associated with the adaptation to fire-derived cues. Seeds of weed and crop species with similar properties/genes will then be used to test if the identified novel mechanism has potential for weed control or improving crop seed quality. The consortium has solid fire vegetation management and agri-technological expertise in these applications to provide solutions for this global challenge in climate change, healthy environment and food security.
Fire is a global phenomenon which together with climate shapes the vegetation of natural and agricultural land. Our interaction with fire is characterised by both positive and negative aspects for mankind. Humans have long used fire including for landscape and weed management, and as tool to improve crop growth on arable land. Controlled fire is necessary to preserve the health and stimulate rejuvenation of wildland ecosystems such as the Brazilian Cerrado, the Mediterranean, as well as UK peatland and moorland. In these fire-prone regions plant regeneration is achieved to a large extent from soil-stored plant seeds. Depending on the species, environment, season and seed properties, the germination of the soil-stored seeds may be stimulated by compounds derived from the smoke or by the fire-generated heat-shock. The aim of the project is to comparatively investigate seeds from species adapted to fire-prone regions to identify novel mechanisms underpinning fire-generated heat-shock and smoke as germination cues. The derived mechanisms will be tested as tools for weed management and crop seed enhancement.
Treatment with smoke and various smoke-derived compounds can stimulate the germination of certain weed seeds. This can be used as a weed management tool to deprive the soil from weeds prior to crop seed sowing. We however do not know why this does not work with all weed species, at all ambient conditions (temperature, seasons), and what seed structures and seed coat properties determine the effectiveness of the treatment. Smoke, various smoke-derived compounds, as well as heat-shock treatment can also improve the seed quality and performance of seedling establishment of certain vegetable crops. Again, we do not know what seed structures, seed coat properties and genes are responsible for these effects and why it only works with certain crop species. To advance our knowledge in this topic the leading seed science lab of Royal Holloway University of London (RHUK, United Kingdom) will collaborate with experts for fire vegetation management and Brazilian Cerrado species properties of Sao Paulo State University (UNESP, Brazil). The FAPESP-NERC programme is especially suited to support this collaboration based on the agreement of the two funding agencies.
In the project we will investigate seeds of different fire-adapted species to identify novel mechanisms controlling how fire-derived smoke and heat-shock affect their germination, storability, and seedling establishment. This work will be conducted using methods from different science and engineering fields (including molecular biology, microscopy/imaging, biomechanical engineering, physiology) through interdisciplinary collaboration in a comparative approach with many fire-adapted species. This approach will for example identify certain seed coat properties or certain genes associated with the adaptation to fire-derived cues. Seeds of weed and crop species with similar properties/genes will then be used to test if the identified novel mechanism has potential for weed control or improving crop seed quality. The consortium has solid fire vegetation management and agri-technological expertise in these applications to provide solutions for this global challenge in climate change, healthy environment and food security.
Planned Impact
Beyond academic beneficiaries, professionals in man-made fire and wildfire, vegetation and land management and policy making are beneficiaries from our research. Both countries, Brazil and the UK have a long-established wildfire research and management experience with the Brazilian Cerrado and UK peatland and moorland as major fire-prone national ecosystems. There is a need for a consistent fire policy for Cerrado conservation in Brazil, and the non-existing national wildfire agency or strategy in England as well as the role of fire in UK peatland and moorland management are a matter of ongoing discussions. Wildfires have shaped the fire-adapted ecosystems, but the vegetation and land management consequences of the intense 2018 fires are beyond the natural fire regimes (intensity and severity). A Royal Society workshop on the interaction of fire and mankind concluded that wildfire research should be integrated across disciplinary and national academic frameworks so that research and policy can tackle 21st century fire problems. Brazil's EMBRAPA-Cenargen, which focuses on conservation and management of genetic resources of the Cerrado.
Beyond ecosystem services for natural landscapes, prescribed burning has been used for managing arable land. Farmers, the agricultural and horticultural sector, the seed technology, crop breeding and weed management industry are key beneficiaries of our Brazil-UK research project into "fire: heat-shock and smoke". Smoke water is used in to enhance germination and trigger a flush emergence in arable weed management strategies; Prof Leubner's interview "Smoking out blackgrass seeds" at the SEB Annual Meeting 2016 in Brighton is an example for this (Science Daily https://www.sciencedaily.com/releases/2016/07/160706091510.htm). The seed germination of vegetable crops can be improved with smoke water priming treatment and heat-shock of crop seeds is a technology to improve the storage resilience of commercial seed. Seed industry, including major collaboration partners of RHUL's Seed Science Group (KWS Seed SE, Syngenta, Tozer Seeds, Elsoms Seeds, Croda/Incotec, Royal Horticultural Society - RHS) are therefore key stakeholders for both aspects of our fire research: heat-shock and smoke. Brazil is a world leader in applied seed technology and many seed companies have a research base in the country. The global seed market has a value of $50billion (2012) and of this the EU ranks 3rd (20%) and Brazil 4th (6%). Seed industry in Brazil and the UK is among the beneficiaries of our research collaboration.
For the impact in potential applied follow-up projects improving Cerrado seed quality for restoration projects is also a very timely topic and crucial need. Our experience seed science and technology applied to this challenge together with the smoke water and heatshock results from the Seedcorn project will certainly be important to achieve this in applied follow-up projects. Restoration of Cerrado is of great challenge, mostly because Cerrado's resilience is being lost due to changes in land use. The use of novel direct seeding with seed technology refined native seed therefore holds great potential for preserving the Cerrado biodiversity.
Finally, there are direct and indirect socioeconomic and health impacts of fire and smoke on people and society. Fire can destroy livelihoods and smoke pollution from different sources is a public health problem. This is also a focus RHUL's Wildfire Research Hub (Leverhulme Trust) which is into fire, climate change, people & habitat protection in several global regions one of which is the Brazilian Cerrado. Their fire social-ecological and policy-related research is very different to our project into the mechanisms of fire-adapted seed traits, but there will be opportunities for synergism with fire-related impact activities and networking, especially if it is associated with the Brazilian Cerrado. The general public is also among our stakeholders.
Beyond ecosystem services for natural landscapes, prescribed burning has been used for managing arable land. Farmers, the agricultural and horticultural sector, the seed technology, crop breeding and weed management industry are key beneficiaries of our Brazil-UK research project into "fire: heat-shock and smoke". Smoke water is used in to enhance germination and trigger a flush emergence in arable weed management strategies; Prof Leubner's interview "Smoking out blackgrass seeds" at the SEB Annual Meeting 2016 in Brighton is an example for this (Science Daily https://www.sciencedaily.com/releases/2016/07/160706091510.htm). The seed germination of vegetable crops can be improved with smoke water priming treatment and heat-shock of crop seeds is a technology to improve the storage resilience of commercial seed. Seed industry, including major collaboration partners of RHUL's Seed Science Group (KWS Seed SE, Syngenta, Tozer Seeds, Elsoms Seeds, Croda/Incotec, Royal Horticultural Society - RHS) are therefore key stakeholders for both aspects of our fire research: heat-shock and smoke. Brazil is a world leader in applied seed technology and many seed companies have a research base in the country. The global seed market has a value of $50billion (2012) and of this the EU ranks 3rd (20%) and Brazil 4th (6%). Seed industry in Brazil and the UK is among the beneficiaries of our research collaboration.
For the impact in potential applied follow-up projects improving Cerrado seed quality for restoration projects is also a very timely topic and crucial need. Our experience seed science and technology applied to this challenge together with the smoke water and heatshock results from the Seedcorn project will certainly be important to achieve this in applied follow-up projects. Restoration of Cerrado is of great challenge, mostly because Cerrado's resilience is being lost due to changes in land use. The use of novel direct seeding with seed technology refined native seed therefore holds great potential for preserving the Cerrado biodiversity.
Finally, there are direct and indirect socioeconomic and health impacts of fire and smoke on people and society. Fire can destroy livelihoods and smoke pollution from different sources is a public health problem. This is also a focus RHUL's Wildfire Research Hub (Leverhulme Trust) which is into fire, climate change, people & habitat protection in several global regions one of which is the Brazilian Cerrado. Their fire social-ecological and policy-related research is very different to our project into the mechanisms of fire-adapted seed traits, but there will be opportunities for synergism with fire-related impact activities and networking, especially if it is associated with the Brazilian Cerrado. The general public is also among our stakeholders.
Description | NE/T004851/1 - NERC/FAPESP Global Partnership Seedcorn Fund - 'Fire adapted seed traits in Cerrado species' joint project UK-Brazil: Our COVID-19 related grant extension request was approved and allowed to conduct our revised time plan and deliver some output. (1) Cerrado seeds were collected in the next rainy season (from January 2021 onwards), exchange these seed lots was in March 2021 and research conducted. (2) Germination results upon smoke water treatment and heat shock were obtained and compiled (data will be available on EIDC) (3) Structural data of seeds were obtained based on various types of microscopy and Videometerlab MultispectralImaging (4) RNA extraction protocols were improved and RNA successfully extracted from several seedlots and endemic species representing three families (5) A UK-Brazil online workshop was conducted with presentation of collaboration results and guest presentations from the Leverhulme Wildfire Centre (6) Collaboration publications are in preparation, but require some additional work for completion for which funding is currently lacking |
Exploitation Route | It was agreed to try to sustain the established UK-Brazilian partnership with future collaboration which requires funding. The biggest problem was that due the pandemic none of the mutual research visits were possible, especially not the visit of the Brazilian PhD student at Royal Holloway. Funding for follow-up research is needed. |
Sectors | Agriculture, Food and Drink,Education,Environment |
Description | NE/T004851/1 - NERC/FAPESP Global Partnership Seedcorn Fund - 'Fire adapted seed traits in Cerrado species' joint project UK-Brazil: We have successfully started our new international collaboration the COVID-19 pandemic prevented the seed exchange, networking and collaboration research which are impossible to be accomplished this year (2020). The project was extended (no-cost) for 2021. Findings were used to establish the collaboration and to engage with the Leverhulme Centre for Wildfires, Environment and Society. Routes to impact were therefore initiated, but getting there requires follow-up funding. |
First Year Of Impact | 2022 |
Sector | Agriculture, Food and Drink,Education,Environment |
Impact Types | Societal |
Title | Expansion of seed and food biomechanics technology platform by a nano indentation device |
Description | A Bruker TS 77 Select Nanoindentation System (ca. £130k) was acquired 2021/22 as capital equipment to expand the seed and food biomechanics technology platform. This is a key expertise of Dr Tina Steinbrecher. Nanoindentation is an established tool to determine mechanical properties of materials, such as hardness and elastic modulus, on a nano- to micrometer length scale. The main advantage of this technique is the high spatial resolution while only a small probe size is required. Nanoindentation has been shown to be a valuable tool to examine even complex biological samples. In recent years the application of nanoindentation methods in the areas of soft tissues and biological materials has increased significantly. |
Type Of Material | Improvements to research infrastructure |
Year Produced | 2022 |
Provided To Others? | Yes |
Impact | Expansion of generic core technology platforms enable strengthening research. Securing unique staff expertise and expanding capabilities in multidisciplinary cross-cutting technology platforms to address the challenges across the Plant, Seed and Food Supply Chain Security and Sustainability. The vulnerability of food supply chains was exposed by COVID-19 (Garnett et al, Nature Food 1:315-318) and by the Climate Crisis. Food supply chain security and sustainability depends on quality crop seeds (input), environmental-friendly crop production and food processing. |
Title | Expansion of seed and food imaging technology platform by a VideometerLab Multispectral Imaging device |
Description | MultiSpectral Imaging (MSI) will be conducted with a VideometerLab4 device possessing 19 high power LED sources with a range from 365 nm to 970 nm. An integrating sphere provides a homogeneous and diffuse illumination, allowing spectral imaging in 5-10 seconds. For an automated reliable image analysis to distinguish between infested and 'clean' seeds, an optimised downstream analysis is needed. Nondestructive method for detecting and diagnosing seed-borne pathogens in crop seed batches |
Type Of Material | Improvements to research infrastructure |
Year Produced | 2021 |
Provided To Others? | Yes |
Impact | Acquired additional funding. Expansion of generic core technology platforms enable strengthening research. Securing unique staff expertise and expanding capabilities in multidisciplinary cross-cutting technology platforms to address the challenges across the Plant, Seed and Food Supply Chain Security and Sustainability. The vulnerability of food supply chains was exposed by COVID-19 (Garnett et al, Nature Food 1:315-318) and by the Climate Crisis. Food supply chain security and sustainability depends on quality crop seeds (input), environmental-friendly crop production and food processing. |
Title | EIDC Research Dataset: Seedcorn Fire - Fire adapted seed traits in Cerrado species |
Description | Collaboration project "Fire adapted seed traits in Cerrado species" generated data will be available via EIDC: (i) Germination/Growth data will be collected for both fruit, seed and seedling types (ii) Environmental data (temperature, precipitation, etc.) in the field (GPS data, Data Logger data) (iii) Information on the fruit and seed structure (morphological and mechanical data based in images) in the form of electron/light microscope images (iv) Gene transcript abundances quantified by RT-qPCR |
Type Of Material | Database/Collection of data |
Year Produced | 2022 |
Provided To Others? | No |
Impact | Too early, dataset will be uploaded in 2022 and made available to the public later together with publication |
Description | Fire-adapted seed traits in Cerrado species |
Organisation | Sao Paulo State University |
Country | Brazil |
Sector | Academic/University |
PI Contribution | The Collaboration Project was extended to autumn 2021. Reason for grant extension: The coronavirus (COVID-19) pandemic has impacted our collaboration/networking project "Fire-adapted seed traits in Cerrado species" (NE/T004851/1 & FAPESP 2019/09903-0), funded by the NERC/FAPESP (UK/Brazil) Global Partnership Seedcorn Fund (GPSF 2019 call) with severe disruption and currently continues to prevent travel, research visits and seed collection/exchange between the teams in London and Sao Paulo. We however have several online meetings and are currently in the process to receive seeds from Brazil |
Collaborator Contribution | The Collaboration Project was extended to autumn 2021. Reason for grant extension: The coronavirus (COVID-19) pandemic has impacted our collaboration/networking project "Fire-adapted seed traits in Cerrado species" (NE/T004851/1 & FAPESP 2019/09903-0), funded by the NERC/FAPESP (UK/Brazil) Global Partnership Seedcorn Fund (GPSF 2019 call) with severe disruption and currently continues to prevent travel, research visits and seed collection/exchange between the teams in London and Sao Paulo. We however have several online meetings and are currently in the process to receive seeds from Brazil, they collected seeds. |
Impact | The Collaboration Project was extended to autumn 2021. Reason for grant extension: The coronavirus (COVID-19) pandemic has impacted our collaboration/networking project "Fire-adapted seed traits in Cerrado species" (NE/T004851/1 & FAPESP 2019/09903-0), funded by the NERC/FAPESP (UK/Brazil) Global Partnership Seedcorn Fund (GPSF 2019 call) with severe disruption and currently continues to prevent travel, research visits and seed collection/exchange between the teams in London and Sao Paulo. We however have several online meetings and are currently in the process to receive seeds from Brazil |
Start Year | 2019 |
Description | UK-Brazil Workshop. Talk "Smoke-derived chemicals and heat-shock as germination cues" |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Postgraduate students |
Results and Impact | Interdisciplinary Workshop UK-Brazil with mainly presentations and participation of PhD students, my presentation was the more general introductory talk to smoke and fire as germination cues. Plans for near-future publications and applications were discussed. |
Year(s) Of Engagement Activity | 2021 |