Candidate genes for host association in aphids

Lead Research Organisation: University of York
Department Name: Biology

Abstract

The origin of new biological species depends on the evolution of characters that prevent them from mating and producing successful offspring. This evolutionary process may start with adaptation to new environments but this rarely creates a complete reproductive barrier. If some interbreeding occurs, then genes which are not directly involved in adaptation to different habitats can still be shared. We still have little understanding of how evolution proceeds from this point to the point of complete prevention of interbreeding.
In this project, we propose to study the pea aphid because its genome has been sequenced and it is known to feed on several different host plant, which represent distinct environments. We know that aphids tend to reproduce with others that use the same plant. This tendency is stronger in some cases than others so we have several points on the progression towards new species that we can compare.
Aphids use chemical cues to choose the plant on which they feed and we now know the types of genes underlying recognition of these cues. We have already found some of these genes that are likely to be involved in the differences in behaviour between aphids that use different plants. In this new project we want to find out how these genes are influenced by natural selection and how they affect the sharing of other genes between host races of aphids. We also want to find out which chemicals in the plants are used in the recognition process.
This will help us to understand the origin of species and it may also help in control of aphids that are pests of crops. Understanding how aphids choose the plants they want to feed on can provide new tools to prevent aphid damage.

Planned Impact

Who will benefit from this research?

In addition to academic beneficiaries, we identify two interested groups:

1. Agriculturalists and horticulturists - many aphid species are agricultural or horticultural pests. Most are host specialists. Understanding how aphids discriminate host plants from non-host plants holds great interest in these sectors.
2. The public - evolution is of great public interest, and is often a controversial topic. The origin of species is of particular interest, partly because of the title of Darwin's book and partly because some groups find modification within species easier to accept than the origin of new species. Speciation is a slow process and therefore difficult to demonstrate in a satisfactory way. Cases like the pea aphid, where mutliple different stages in the process of divergence are available, are good vehicles for education about speciation.

How will they benefit from the research?

1. We do not expect directly exploitable results from this project but it may indicate new strategies for aphid control. We will ensure that relevant results are communicated to potential beneficiaries through appropriate publications, attendance at meetings and direct contacts with companies.
2. Public understanding of evolution contributes to the quality of life, particularly in modern society where evolution is relevant to many societal problems ranging from antibiotic resistance to management of fish stocks. We will communicate our results to the public through appropriate publications and other means of dissemination.

Publications

10 25 50
 
Description Our aim was to understand how adaptation to a new environment can lead to reproductive isolation, by using pea aphids that are specialised on different plants as a model. Specifically, we hypothesised that chemosensory genes play a key role in host plant adaptation and the evolution of specialisation.
We tested for the role of chemosensory genes in the divergence between eight host plant species that that are genetically differentiated to different extents. We have shown that there is higher differentiation in chemosensory genes than in control genes, confirming our hypothesis and indicating that selection on smell and taste is indeed one of the major reasons for host race formation in the pea aphid.
We also investigated gene expression when aphids that are specialised on different plants were reared on a common host plant or their typical host. The host races could be distinguished on the basis of gene expression, with more divergent races having higher numbers of differentially expressed genes. Genes that were differentially expressed on the two host plants were not necessarily those that were differentially expressed between races.
We are currently in the process of analysing the association between host acceptance and candidate loci using QTL mapping of an F2 family.
Exploitation Route This will help to understand how aphids make feeding decisions and may eventually help in development of methods for aphid control.
Sectors Agriculture, Food and Drink

 
Description Speciaphid 
Organisation French National Institute of Agricultural Research
Department INRA Rennes Centre
Country France 
Sector Public 
PI Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Collaborator Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Impact The collaboration involves researchers specialising in ecology, evolutionary biology, agricultural sciences, genomics and bioinformatics.
Start Year 2012
 
Description Speciaphid 
Organisation University of Montpellier
Department Institute of Evolutionary Sciences (ISEM)
Country France 
Sector Academic/University 
PI Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Collaborator Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Impact The collaboration involves researchers specialising in ecology, evolutionary biology, agricultural sciences, genomics and bioinformatics.
Start Year 2012
 
Description Speciaphid 
Organisation University of Oxford
Department Department of Zoology
Country United Kingdom 
Sector Academic/University 
PI Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Collaborator Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Impact The collaboration involves researchers specialising in ecology, evolutionary biology, agricultural sciences, genomics and bioinformatics.
Start Year 2012
 
Description Speciaphid 
Organisation University of Sheffield
Country United Kingdom 
Sector Academic/University 
PI Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Collaborator Contribution Our work on speciation in aphids and on the role of bacterial symbionts in aphids is done under the speciaphid agreement, an agreement between French and British researchers to coordinate their research efforts on this system, collaborate and share material. We have exchanged samples, data as well as meeting on a regular basis.
Impact The collaboration involves researchers specialising in ecology, evolutionary biology, agricultural sciences, genomics and bioinformatics.
Start Year 2012
 
Description Hosting school pupils 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Two students visited the lab for a day to learn more about our research.
Year(s) Of Engagement Activity 2016
 
Description School Visit (York) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact 60 primary school children attended this session, which sparked interest in entomology, aphids and ecology more generally
Year(s) Of Engagement Activity 2017