The structure and dynamics of the plant endoplasmic reticulum - WCUB, ENWW

Lead Research Organisation: Oxford Brookes University

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

People

ORCID iD

Publications

10 25 50

Studentship Projects

Project Reference Relationship Related To Start End Student Name
BB/M011224/1 30/09/2015 29/09/2023
1810146 Studentship BB/M011224/1 30/09/2015 29/09/2019
 
Description Software developed for the analysis of a plant membrane bound cell structure termed the "endoplasmic reticulum".
Exploitation Route Software will be made publically available.
Sectors Agriculture, Food and Drink,Manufacturing, including Industrial Biotechology

 
Title AnalyzER 
Description We developed a software package (AnalyzER) to automatically extract ER tubules and cisternae from multi-dimensional fluorescence images of plant ER. Which characterises the structure, topology, protein-localisation patterns, and dynamics are automatically quantified using spatial, intensity and graph-theoretic metrics. 
Type Of Technology Software 
Year Produced 2019 
Open Source License? Yes  
Impact None so far, it was released 2 weeks ago 
URL https://www.nature.com/articles/s41467-019-08893-9#data-availability