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COPD-like airway inflammation during RSV infection of older volunteers: INFLAMMAGE

Lead Research Organisation: Imperial College London
Department Name: National Heart and Lung Institute

Abstract

Based on extensive preclinical and clinical research, we hypothesise that RSV disease represents a dysregulated and over-exuberant inflammatory response to infection. Steroids have limited efficacy, and identification of druggable inflammatory pathways in severe RSV disease would be of great potential value. There are promising clinical assets ready for investigation, however, our ability to test novel therapeutics is limited by the currently available models of viral disease and clinical endpoints tied to disease processes. Observational studies of natural infection are constrained by sampling, timing and access. We therefore propose to extend the experimental human RSV infection studies established at Imperial College to investigate the pulmonary response to RSV infection in older adult non-smokers and smokers, with the development of novel clinical endpoints which can then be used to evaluate the possible impact of treatment with validated novel anti-inflammatory agents from GSK in human RSV disease and therefore in COPD.

Technical Summary

Overall, the aims of this project are to investigate the mechanisms of inflammation in older adult volunteers during respiratory viral infection in vivo and in vitro to develop novel clinical end-points and biomarkers that correlate with infection outcome. In addition to elucidating the pathways involved in steroid-resistant inflammation triggered by viral infection, the future option of treatment with a validated novel therapeutic will allow us to determine if either reducing viral-driven inflammation or directly reducing viral load improves clinical outcome. The early Parts of this project will generate data which will enable selection of an appropriate clinical therapeutic agent for investigation.

Publications

10 25 50

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Sullivan MK (2022) Acute kidney injury in patients hospitalized with COVID-19 from the ISARIC WHO CCP-UK Study: a prospective, multicentre cohort study. in Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association

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Park M (2020) COVID-19: Lessons from SARS and MERS in European Journal of Immunology

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Openshaw PJM (2017) Protective and Harmful Immunity to RSV Infection. in Annual review of immunology

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Marchant A (2017) Maternal immunisation: collaborating with mother nature. in The Lancet. Infectious diseases

 
Description BSI President
Geographic Reach National 
Policy Influence Type Membership of a guideline committee
Impact The British Society for Immunology (BSI) is the largest immunology society in Europe and the second largest in the world. We are a learned society representing the interests of members working in academia, clinical medicine, and industry. Our main objective is to promote and support excellence in research, scholarship and clinical practice in immunology for the benefit of human and animal health.
URL https://immunology.org/resources-careers--education/policy-and-public-affairs/--bsi-resources-policy...
 
Description Developing ethical frameworks for human challenge studies
Geographic Reach Multiple continents/international 
Policy Influence Type Membership of a guideline committee
 
Description Member and Vice Chair NERVTAG
Geographic Reach National 
Policy Influence Type Membership of a guideline committee
 
Description Vaccine Taskforce Human Challenge Board
Geographic Reach National 
Policy Influence Type Participation in a guidance/advisory committee
 
Description A UK underpinning platform to study immunology and immunopathology of COVID-19:The UK Coronavirus Immunology Consortium
Amount £6,552,119 (GBP)
Funding ID MR/V028448/1 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 07/2020 
End 08/2022
 
Description A first-in-human open label wild-type SARS-CoV-2 dose-finding human infection challenge study
Amount £817,899 (GBP)
Organisation Department for Business, Energy & Industrial Strategy 
Sector Public
Country United Kingdom
Start 09/2020 
End 10/2023
 
Description ISARIC - Coronavirus Clinical Characterisation Consortium (ISARIC-4C)
Amount £490,894,600 (GBP)
Funding ID MC_PC_19059 
Organisation Medical Research Council (MRC) 
Sector Public
Country United Kingdom
Start 03/2020 
End 09/2021
 
Description NIHR Imperial Biomedical Research Centre
Amount £90,008,747 (GBP)
Organisation Barts Health NHS Trust 
Department NIHR Biomedical Research Unit
Sector Academic/University
Country United Kingdom
Start 03/2017 
End 03/2022
 
Description Senior Investigator Award
Amount £60,000 (GBP)
Organisation National Institute for Health and Care Research 
Sector Public
Country United Kingdom
Start 03/2020 
End 03/2021
 
Description Analysis Discussion with Investigators (monthly) 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact Analysis Discussion
Year(s) Of Engagement Activity 2023
 
Description Finalising Data 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact This Grant is coming to the end of it's tenure. There are no additional meetings planned at the moment as the two teams are finalising data and starting to write. Future meetings will be more focussed on draft reviews and planned in due course.
Year(s) Of Engagement Activity 2023
 
Description Inflammage Monthly Meeting Calls 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact Monthly Meeting calls to discuss data
Year(s) Of Engagement Activity 2023
 
Description Inflammage Transcriptomics Manuscript 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact Study group discussion with view to publishing a manuscript
Year(s) Of Engagement Activity 2024
 
Description Inflammage Analysis Discussion Monthly 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Study participants or study members
Results and Impact Status Updates with Questions and discussions with regard to the research
Year(s) Of Engagement Activity 2024
 
Description Inflammage Data Analysis Meeting at Imperial College NHLI 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact For progress of trial
• Update on RNA analysis (sample movement, timelines): ready to send off samples from different sites, waiting for purchase order.
Chris asked about ingenuity pathway analysis (IPA), but the licences are expensive and restrictive. This might be done at GSK.
• Update on biomarker analysis (timelines): Have viral load data coming soon. The competition ELISAs are underway. FACS is being done re pre-F and post-F reagents awaited for Bmem analysis. There is a lot of T cell data to be analysed. Panel 1 (activation markers) might be done by a student. Want a pre-F stable M37 antigen from NIH. A2 not so relevant.
Year(s) Of Engagement Activity 2023
 
Description Inflammage Review Data set & Manuscript Planning 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact • Team introductions - 5mins
Reviewing the Inlammage Part B data set and start to scope out manuscript planning from the primary data set.•
. Outputs from RNASeq analysis (led by Chris F, supported by team members) - 55mins
• Review of final symptom and biomarker data sets (led by Stef & Pete) - 30mins
• Discussion of next steps (any further analysis actions) - 15mins
• Discussion on manuscript preparation (All) - 15mins
Year(s) Of Engagement Activity 2023
 
Description Inflammage Review Data set & Manuscript Planning February 2024 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Study participants or study members
Results and Impact to review continued analysis of INFLAMMAGE with the aim to arrive at a manuscript structure (potentially two separate publications).
Outcome was:
• Additional in vitro experiments - comparison of young vs old ALIs (confocal staining combined with functional and infection data) - Action Jo
• Complete MSD analysis of lung cytokine samples from both young and old populations - Action Stef
• Comparison of young adult D7 with old adult D28 - Action Emilio
• Comparison of baseline of infected vs uninfected to see if there is anything obviously different in groups - Action Emilio
• Manuscript 1 (Action Pete to draft) - focus on younger adults data set; transcriptomics and inflammatory markers from lower airways. Focus on cilia observations as novel. Include ALI data with functional endpoints and CXCR3 antagonist.
• Manuscript 2 (Action Imperial to identify lead author(s) ) - focus on comparison of younger vs adult; kinetics and differences together with impaired immune response. Include MSD data and in vitro ALI comparison.
Year(s) Of Engagement Activity 2024
 
Description Interview with BBC Drive Time Hereford and Worcester 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Expert reaction to study looking at long-term symptoms after other acute respiratory infections (including the common cold) versus after COVID-19, as published in eClinicalMedicine* discussed on local radio with two others. Dr David Strain and Professor Paul Harrison
Year(s) Of Engagement Activity 2023
 
Description Interview with Luke Hanrahan of the BBC 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact This was an interview with regard to an update on the HIC VAC video
Year(s) Of Engagement Activity 2023
 
Description Meeting to finalise Manuscript 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact Paper 3 - Inflammaging of Elderly Adults Impacts Immune response to RSV

Hypothesis: older adults have subdued/delayed immune responses in lower airway than young (to be refined)
DEGs in elderly brushings & biopsies
BL infected vs uninfected
D7 vs BL infected
D28 vs BL infected
TBD: uninfected D7 vs BL; uninfected D28 vs BL; D7 infected vs uninfected; D28 infected vs uninfected
GSEA on all of above
Comparison of GSEA between older & young
Do kinetics or size of transcriptomic responses differ?
MSD bronchial SAM data to confirm
Consider lower airway flow/ICS data here

Your latest heatmaps are great, but as they convey so much data in one figure, I think alone people can struggle to grasp it all - despite your nice annotations. I think the above should help guide and orientate. The above list is the main request but if you have the opportunity, I had a few additional suggestions that I think might add to the paper.

Firstly, heatmaps of "leading edge" transcripts of the most interesting/relevant GO terms results (for clarity, I mean the most important genes that determine the enriched GSEA GO term) could be useful to see to highlight some expected genes (especially if DEGs don't show much).
Year(s) Of Engagement Activity 2024
 
Description Monthly Meeting June 2022 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact Welcoming new team member for translational statistical support for analysis for up coming data sets.
• Potential antibody binding assay - Monkia and Alex presented slides on their multiplex immunoassays for humoral immunity which were well received (I'll ask in an email to them for non-conf slides if possible). Briefly, assay capable of measuring endpoints from serum, plasma, saliva and nasal samples, and will detect multiple (up to 500) antibodies at the same time. Platform is semi-automated, accepting 96 or 384 well input, resulting in ~1500 samples per day. Have recently focused on SARS-CoV2 assay, which now detects ~40 antigens and is easily updated with emerging variants. Platform can differentiate between vaccine immunity and infection. Future work to prioritise RSV, influenza and measles assays including varus variants. For RSV the assay has been created with various antigens already, with excellent intra and inter assay performance, dilution linearity, freeze thaw tolerance and reproducibility over time. Team are looking for well characterised sample sets to increase validation of assay and increase our understanding of disease biology. INFLAMMAGE (and wider Imperial projects) have access to well characterised samples which could benefit development and disease understanding. Volume required is 5ul, but typically request 20ul of each sample. Assay development would benefit from expert insight into new antigens to add to the assay against different targets (including specific Memphis37 strain used in challenge studies). Imperial could also potentially provide access to sample from outside the INFLAMMAGE project.

ALI Cultures,.

Recruitment updates
Year(s) Of Engagement Activity 2022
 
Description Monthly Meeting to discuss recruitment 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact 1. Recruit and challenge non-smokers only. This will be the quickest way to complete the clinical study as we almost have the numbers already lined up, but would mean not doing something we originally proposed.
2. We make a protocol amendment to allow enrolment of non-smokers and smokers/ex-smokers with any pack year history. We then enrol 9 non-smokers (giving a total of 12 bronchoscoped non-smokers) and 9 smokers of any type (with the clinical team prioritising those with more pack years). In the meantime, we carry on looking for smokers with 20 pack years (recognising that we may not find any suitable). The amendment is likely to take 4-6 weeks plus local approvals. The other issue will be whether we have sufficient power to show anything with these subgroups. The major finding would be that RSV challenge in smokers is well tolerated.
Year(s) Of Engagement Activity 2022
 
Description Outcome from Dec 2022 Monthly Meeting 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact • Clinical Close out - all samples held, all D28 completed, first batch of D180 also captured. Previously agreed to process for RNASeq to avoid delays to timelines. We have duplicate biopsy samples which could be re-run with final D180 samples to understand any batch effect. Duplicate brushings samples retained for ALI culture work.
• RNA sample timelines - obtaining quote from Genewiz, can ship in Dec - quote will include timeslines (Pete - any update on this?) This enables comparison with existing Imperial data sets for rapid analysis. Malcolm to explore additional GSK support on data uploading and potential analysis.
• Biomarker analysis plans - All samples ready for analysis, with a number of downstream assays planned to fully interrogate the study. All symptom and demographic data collected - to be completed' viral load, IgA ELISA, serum IgG, neutrophil endpoints, flow cytometry endpoints including B-cell response, T-cell panels, BAL/serum/nasal MSDs
• Statistical support - Agreed Stef and Rachel would set up time early in 2023 on analysis plan - data overview and appropriate tools and approaches to analysis to make ready for interpretation and future journal submission.
Year(s) Of Engagement Activity 2022
 
Description Outcome from Monthly Meeting Call 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Study participants or study members
Results and Impact Update on recruitment
Feedback from RSV Meeting
Posters for BSI meeting
Antigen Work marking progress.
Year(s) Of Engagement Activity 2022
 
Description Podcast Zoom - International Federation on Ageing | Podcast to Raise Awareness of hMPV | Recording Session with Dr. Peter Openshaw 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Podcast to raise Awareness of hMPV for the International Federation on Ageing
Year(s) Of Engagement Activity 2024