Organisation dynamics and pairing of the telomeres and sub-telomeres in Arabidopsis meiosis

Lead Research Organisation: University of Birmingham
Department Name: Sch of Biosciences

Abstract

The primary role of the telomeres is to stabilise the ends of the eukaryotic chromosome, but it is apparent that the telomere also has a role in the universal pathway of meiosis, a specialised type of cell division. Most living organisms, from animals to plants reproduce sexually. Briefly, during meiosis the chromosomes are copied, followed by 2 successive chromosome divisions. During the pathway to the first division the pairs of chromosomes find each other and are held together by exchanging part of their chromosomes with their partner, a process known as recombination, until the first division where they are separated. The second division is similar to mitosis. There are many outstanding questions in meiosis for example how do the chromosomes manage to pair and recombine? We think that the telomeres are important in early meiosis to move the chromosomes around until they are closely aligned with their partner. This grant proposal is concerned with understanding more about the organisation and pairing of the telomeric regions in meiosis as well as developing an imaging system to help elucidate the dynamics of telomere behaviour using the model plant, Arabidopsis. There are a number of advantages of using this model plant; for example it only has 5 pairs of chromosomes, its chromosomes have been sequenced and mutants affecting the progression of meiosis and telomere maintenance have been identified. We will use these significant advantages offered by Arabidopsis, in particular that there are only 5 pairs of chromosomes, to elucidate these fundamental aspects of telomere biology. Understanding of the meiotic process has been greatly advanced by biochemical, cytological and genetic analyses of the budding yeast, Saccharomyces cerevisiae and increasingly in a number of other model organisms. Arabidopsis is recognised as an excellent system for analysis of plant meiosis, and one of the aims of the current research is to understand whether and to what extent meiotic processes and controls are conserved across both plants and animals. Inclusion of a plant model is very important, particularly if we are to transfer our knowledge to crop species and traits related to their fertility. It is likely to provide support for key general principles; because meiosis is a universal process, information regarding telomere behaviour in plants is likely to be relevant to general telomere biology and therefore reproduction and telomere function in humans.

Technical Summary

The ends of linear eukaryotic chromosomes are protected from degradation by a complex specialised structure, the telomere, consisting of a repeated DNA motif, and its associated DNA binding proteins. The role of these proteins is to maintain and regulate the telomeres. Degradation of the telomeres leads to loss of genetic material and is linked to a cell senescence and apoptotic pathway. Although the telomere has a primary role in protecting the ends of the chromosomes there is evidence that it also has a role in chromosome movement and progression during the meiotic pathway. This project is concerned with understanding how the telomeres function during meiosis. Meiosis plays a central role in the life cycle of all sexually reproducing organisms, and understanding meiosis underpins our knowledge of fertility and genetic variability. Amongst the outstanding questions in meiosis is how the homologous chromosomes find each other and subsequently synapse and recombine during meiotic prophase. An early event in prophase I is the movement and clustering of the telomeres at the nuclear membrane, to form the so-called 'bouquet', that precedes chromosomal pairing and synapsis. In Arabidopsis we do not observe a bouquet and we have already shown that homologous telomeres are paired at an early stage in the meiotic pathway, before movement to the nuclear membrane. We will investigate how the Arabidopsis telomeres are organised throughout early meiosis at the ultra structural level with the electron microscope, investigate the nature of homologue pairing and develop imaging techniques to study the dynamics of telomere behaviour in vivo. We will use the significant advantages offered by Arabidopsis as a plant model for elucidating these fundamental aspects of telomere biology. Inclusion of a plant model is very important for meiotic research, particularly if we are to transfer our knowledge of Arabidopsis meiosis to crop species and their fertility.
 
Description rWe have identified a type of proteins associated with the chromosome movement that is found in early meiosis.This work will give us the opportunity to uncover the network of proteins involved in allowing this important process to occur in early meiosis.
Exploitation Route I jhave provided constructs that ere used for the project to other EU colleagues that are using them to study live imaging of chromosomes in meiosis
Sectors Agriculture, Food and Drink

URL https://www.researchgate.net/profile/Susan_Armstrong2
 
Description EU cost action
Amount € 1,000,000 (EUR)
Funding ID cost action CA 26212 in depth 
Organisation European Cooperation in Science and Technology (COST) 
Sector Public
Country Belgium
Start 06/2017 
End 06/2021
 
Description UNIVERSITY TRAVEL AWARD
Amount £1,500 (GBP)
Funding ID bibems award 
Organisation University of Birmingham 
Department School of Biosciences
Sector Academic/University
Country United Kingdom
Start 09/2008 
 
Title cytological methods foranalyss of Arabidopsis meiosis 
Description mrthods for hoe to aess meiotic tissue of ARABIDOPSIS, INCLUDING USE OF ANTIBODIES TO COMPONENTS PF MEIOSIS 
Type Of Material Biological samples 
Year Produced 2011 
Provided To Others? Yes  
Impact Our method has allowed researchers to translate what we have learnt from arabidopsis meiosis to important crop species 
 
Description Meiotic analysis of plants with disrupted telomeres 
Organisation Texas A&M University
Country United States 
Sector Academic/University 
PI Contribution we have given advice to this group regsrding meiosis
Collaborator Contribution They have provided antibodies e.g. Pot1
Impact There will be a llink to current project that my colleague from TAMU is submitting.
Start Year 2010
 
Description SUPPLYING DATA FOR A PHD 
Organisation Coventry University
Department Faculty of Engineering and Computing
Country United Kingdom 
Sector Academic/University 
PI Contribution WE HAVE FORMED A COLLABORATION BY COMRIBUTING OUR RNA SEQ DATAA FOR RESERCH PURPOSES
Collaborator Contribution tHEY ARE GOING TO USED OUR DATA FOR A PHD AT COVENRRY , SUPERVISED BY DR JIANHUA YANG
Impact WE EXPECT THE DATA WE HAVE PROVIDED TO BE USEFUL FOR CHARAERING OUR LOCUS FOR IDENTIFYING OUR HOMEOLOGOUS PAIRINF GENE
Start Year 2015
 
Description joint work using material provided by Isobel Parkin 
Organisation Agriculture and Agri-Food Canada
Country Canada 
Sector Public 
PI Contribution wE HAVE JOINTLY IDENTIFIED THE QTL CONTROLLING HOMEOLOGOUS PAIING IN B. NAPUS , BY DIFFERENT METHODS. WE HAVE USED A CYTOLOGICAL APPROACH.
Collaborator Contribution THE TEAM LED BY ISOBEL PARKIN HAVE ALSO IDENTIFIED A SIMILAR QTL BY USING MARKER ASSOCIATION
Impact wE ARE CURRENTLY WORKING IN TWO PAPERS TO ILLUSTRATE OUR JOINT APPROACHES,1Variation in distribution and levels of homoeologous recombination among Brassica napus lines identified using a genome-wide SNP array THIS PAPER HAS BEEN SUBMITTED TO GENES AND GENOMES AND IS CURRENTLY IN REVISION Isobel Parkin Susan Armstrong Erin Higgins Wayne Clarke Elaine Howell
 
Description the role of sun proteins in meiosis 
Organisation Oxford Brookes University
Country United Kingdom 
Sector Academic/University 
PI Contribution We are conriburing to a joint research project investigating on the role of telomerr in plant meiosis-
Collaborator Contribution THey have provided us with Antibodides to the the sun proteins
Impact Paper under review Grnt applicarion to bbsrc beig put togther fot Jan205 submission
Start Year 2010
 
Description PAG 2015 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact THIS OSTER WAS WIDELY SEEN BY BREEDERS BND OTHER SCIENTISTS AT THIS MEETING AND ALLOWED OUR PRESENTER MARA CUOCOS TO SPEAK ABOUT OUR PROJECT
Year(s) Of Engagement Activity 2015
URL https://pag.confex.com/pag/xxiii/webprogram/Paper15788.html
 
Description WORKSHOP 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact It started in usd getting s COST action underway
Year(s) Of Engagement Activity 2013,2014
 
Description presentation at Plant and animal genome conference (PAG, 2014) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? Yes
Geographic Reach International
Primary Audience Participants in your research and patient groups
Results and Impact The presentation sparked questions and discussion afterwards.

The presentation led to a suggestion for colabaration.
Year(s) Of Engagement Activity 2014