Interactions between Notch signalling and SoxB transcription factors during the development and regeneration of sensory hair cells

Lead Research Organisation: University College London
Department Name: Ear Institute

Abstract

The inner ear contains different sensory organs responsible for hearing and the perception of head movements. Each sensory organ contains a limited number of sensory cells, named hair cells. In mammals, the loss of auditory hair cells following a noise trauma, ototoxicity, or during aging is irreversible and causes permanent deafness. But in birds, fish and amphibians, inner ear hair cells are produced throughout life and regenerate following tissue injury. Our main objective is to identify the genes and signals involved in the production of hair cells during embryonic development and their post-traumatic regeneration in the chick inner ear. In the long term, our findings could contribute to the development of new therapies for deafness.

Technical Summary

The overall objective of this project is to gain a better understanding of the mechanisms regulating the production of sensory hair cells in the inner ear. All sensory epithelia of the inner ear are composed of a regular mosaic of sensory hair cells separated from one another by non-sensory supporting cells. In mammals, the loss of auditory hair cells following an acoustic trauma, ototoxicity, or during aging is irreversible and is a major cause of deafness. On the other hand, hair cells can regenerate in birds and cold-blooded vertebrates. This is because in these species, the supporting cells can act as 'tissue stem cells' to generate on demand new hair cells throughout life. The signals and genetic networks controlling hair cell development and regeneration are just beginning to be elucidated. Among these are the Notch signalling pathway and the Sox2 transcription factor: both are required for the normal production of hair cells, and our preliminary data suggest that Notch regulates Sox2 expression in the developing chick inner ear. We will further investigate this question and the role of additional Sox genes during hair cell formation using gain-of-function and loss-of-function approaches. The experiments will be performed in two different contexts 1) during the embryonic production of hair cells, and 2) during the post-traumatic regeneration of hair cells, using the chick inner ear as a model system. Our findings will contribute to a better understanding of the genetic networks controlling sensory cell production and renewal in the ear, and could promote in the long term the development of new cures for human deafness. They could also have implications for other stem cell compartments where Notch signalling and Sox transcription factors are active.
 
Description This project has improved our understanding of the molecular mechanisms controlling the development and regeneration of sensory 'hair' cells in the inner ear. Using newly developed tools for very precisely manipulating gene expression in the avian inner ear, we have found that the Sox21 transcription factor can promote hair cell formation during embryonic development. We have also clarified the mechanisms whereby Notch signalling regulates the formation of a precise cellular mosaic of hair cells and supporting cells during the development of the inner ear, and during its regeneration in birds. In addition, we have identified a new gene that could be implicated in certain forms of deafness in humans.
Exploitation Route We have shown that manipulating the levels of expression of the Sox21 transcription factor can promote hair cell differentiation in the avian inner ear. This result could be very important for the design of future gene therapies aiming at stimulating hair cell regeneration in the mammalian inner ear. This research contributes to a better understanding of the genetic networks controlling sensory formation in the inner ear, an important step towards the development of the 'next-generation' therapies for deafness.
The identification of plastin 1 as a candidate gene for hereditary forms of progressive hearing loss could also lead to better diagnosis and prevention of this condition in the future.
Sectors Healthcare,Pharmaceuticals and Medical Biotechnology

 
Description My research is in the area of basic science, and as far as I am aware, it has not resulted in any direct economic impact. The wide societal/cultural impact that could arise from this work is difficult to measure, but some of our findings (e.g. the implication of plastin 1 in hearing loss) have been highlighted on external websites of the charities supporting our work (Action on Hearing Loss and Deafness Research UK, which have now merged) which are directed towards the wider public and hearing loss sufferers. An additional tangible impact is the exposure of supporters of these charities to our work when they visit my lab and the Ear Institute.
First Year Of Impact 2009
Sector Healthcare,Other
Impact Types Cultural,Societal

 
Description The grant was obtained to fund the visit of a post doctoral fellow to the lab of Dr Raj Ladher at the RIKEN centre for developmental Biology in Kobe (Japan).
Amount £4,000 (GBP)
Funding ID ISIS 2081 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 06/2010 
End 08/2010
 
Title Tol2 transposon vectors 
Description We have generated new Tol2 DNA vectors that can be used for analysis of gene expression and testing gene function. 
Type Of Material Technology assay or reagent 
Year Produced 2010 
Provided To Others? Yes  
Impact Transposon vectors are now the most common tool used in my lab for long term manipulation of gene expression in the avian inner ear and have already been used in 3 of our recent publications. Other groups using the avian embryo as a model system for organogenesis studies are also using this tool, but the Tol2 vectors are not species-specific and are therefore extremely versatile. 
 
Description Collaboration Prestin 
Organisation University College London
Country United Kingdom 
Sector Academic/University 
PI Contribution I provided expertise in molecular cloning for generating new DNA plasmids for functional studies in mammalian cells.
Collaborator Contribution The partners provided expertise in cell physiology and performed most of the experimental work.
Impact Mistrík, P., Daudet, N., Morandell, K., Ashmore, J.F. (2012). Mammalian prestin is a weak Cl?/HCO3? electrogenic antiporter.. J Physiol, 590 (Pt 22), 5597-5610. doi:10.1113/jphysiol.2012.241448 multidisciplinary collaboration, molecular biology/cloning, cell physiology/imaging.
Start Year 2009
 
Description Collaboration imaging/actin 
Organisation University College London
Country United Kingdom 
Sector Academic/University 
PI Contribution provided training and expertise in molecular biology and in ovo electroporation methods.
Collaborator Contribution provided training and expertise in live-imaging techniques.
Impact Chrysostomou, E., Gale, J.E., Daudet, N. (2012). Delta-like 1 and lateral inhibition during hair cell formation in the chicken inner ear: evidence against cis-inhibition.. Development, 139 (20), 3764-3774. doi:10.1242/dev.074476 (recommended in Faculty of 1000) Bird, J.E., Daudet, N., Warchol, M.E., Gale, J.E. (2010). Supporting cells eliminate dying sensory hair cells to maintain epithelial integrity in the avian inner ear.. J Neurosci, 30 (37), 12545-12556. doi:10.1523/JNEUROSCI.3042-10.2010
Start Year 2008
 
Description Collaboration with Raj Ladher, Kobe Riken Centre for Developmental Biology 
Organisation RIKEN
Department RIKEN Center for Developmental Biology
Country Japan 
Sector Public 
PI Contribution A new collaboration was established with RIKEN Centre for Developmental Biology to start a project investigating the function of sulfatases during otic induction.
Collaborator Contribution partner provided training to the PDRA SF during a visit to the RIKEN CDB.
Impact partnership resulted in training of PDRA SF and him subsequently joining the lab of R. Ladher as a research associate.
Start Year 2010
 
Description Tol2-mediated gene transfer and in ovo electroporation of the otic placode: a powerful and versatile approach for investigating embryonic development and regeneration of the chicken inner ear. 
Organisation Nara Institute of Science and Technology
Country Japan 
Sector Academic/University 
PI Contribution A collaboration was established with Nara Institute of Science and Technology, Japan to use new molecular tools for studying gene function in the avian inner ear.
Collaborator Contribution Partners supplied DNA plasmids to be used for in ovo electroporation.
Impact Freeman, S., Chrysostomou, E., Kawakami, K., Takahashi, Y., Daudet, N. (2012). Tol2-mediated gene transfer and in ovo electroporation of the otic placode: a powerful and versatile approach for investigating embryonic development and regeneration of the chicken inner ear.. Methods Mol Biol, 916 127-139. doi:10.1007/978-1-61779-980-8_10 This is not a multidisciplinary collaboration.
Start Year 2007
 
Description collaboration plastin 
Organisation University of Sheffield
Country United Kingdom 
Sector Academic/University 
PI Contribution I conceived/wrote the study and initiated the partnership.
Collaborator Contribution The partners performed in vitro experiments to investigate the contribution of plastin1 to hair cell mechanotransduction.
Impact Taylor, R., Bullen, A., Johnson, S.L., Grimm-Günter, E.M., Rivero, F., Marcotti, W., Forge, A., Daudet, N. (2014). Absence of plastin 1 causes abnormal maintenance of hair cell stereocilia and a moderate form of hearing loss in mice.. Hum Mol Genet, doi:10.1093/hmg/ddu417
Start Year 2011
 
Description collaboration regeneration 
Organisation University of Washington
Country United States 
Sector Academic/University 
PI Contribution I performed expression studies on fixed tissue, and contributed to the design/writing of the study,
Collaborator Contribution the partner performed in vivo and in vitro experiments, and conceived/wrote the study.
Impact Daudet, N., Gibson, R., Shang, J., Bernard, A., Lewis, J., Stone, J. (2009). Notch regulation of progenitor cell behaviour in quiescent and regenerating auditory epithelium of mature birds.. Developmental Biology, Feb 1:326 (1), 86-100. doi:10.1016/j.ydbio.2008.10.033
Start Year 2007
 
Description visit of Action on Hearing Loss and Deafness Research UK supporters 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? Yes
Geographic Reach Local
Primary Audience Supporters
Results and Impact talk helped supporters and fund raisers to understand the basic research performed in my lab. Students were also involved and gained training in communicating science to the general public.

I have been told that some donors offered extra funding to the charity after visiting the lab.
Year(s) Of Engagement Activity 2007,2008,2009,2010,2011,2012,2013,2014,2015