Research Development Fellowship. Towards biorefineries based on wastes: efficient enzymatic lignin degradation

Lead Research Organisation: University of Nottingham
Department Name: Div of Process and Environmental Eng

Abstract

Dwindling oil reserves and climate change represent major challenges for society over the next 50-100 years. A number of solutions are being developed, one of which is the replacement of fossil fuels with liquid biofuels. Biofuels are produced by fermenting plant-derived sugars to produce ethanol and butanol. The easiest way to produce biofuels is to ferment food crops, such as sugar cane, cereals, rice or maize, but the increase in industrial biofuel production from starch-containing food crops is already leading to increasing food prices. This raises the spectre of widespread starvation if the developed world continues to meet the need for liquid transportation fuels at the expense of food supplies for developing countries. One solution might be to increase the area of land cultivated to produce starch-containing crops. However, this would reduce biodiversity, with the inevitable environmental consequences. Furthermore, increasing crop cultivation would increase water use, at a time when there is already a serious problem with providing enough fresh water for the human population to drink. Therefore, the solution is obvious: instead of using starch as the primary feedstock for biofuel production, we must use waste materials that are left over after harvesting food crops and after processing food for human consumption. We must also learn to make use of materials that we currently send to landfill as rubbish. The big problem is that agricultural and food wastes are composed primarily of lignocellulose, and municipal wastes are also mixed with plastics from packaging. Whilst cellulose can already be used as a feedstock for biofuel production, lignin and waste plastics are much more difficult to break down into useful chemicals except under harsh reaction conditions and at high temperatures. Therefore, the aim of this project is to develop new enzymatic methods to degrade lignin and plastics which will work at low temperatures with environmentally benign reagents. We shall use unusual enzymes called ligninases, which are able to produce reactive reaction products, called free radicals. Free radicals are chemical terrorists - they literally blow apart any molecule that they come into contact with. Ligninases are produced by wood rotting fungi, and their natural function is to break down lignin in wood. However, ligninases are also exploited in industry to smash up all sorts of molecules, including dyes, chemical intermediates and plastics. The enzymes do not work very well under natural conditions because lignin is not soluble in water and the enzymes cannot get close enough to smash the lignin efficiently. Therefore, we plan to use ionic liquids instead of water to bring the enzyme and the lignin into contact. Ionic liquids are salts, but unlike the familiar crystalline salts (e.g. sodium choride), they are unable to form proper crystals except at sub-zero temperatures. At room temperature, they are liquids, and they have very unusual properties, including the ability to dissolve lignin and support enzymatic activity. Therefore, the ionic liquids will help to dissolve the lignin and the enzyme will break it down to form useful products. This will make it possible to degrade lignin much more quickly than in water. In this project, we shall develop new processes to break down lignin and other waste polymers for use as feedstocks in biorefineries to produce useful chemicals and fuels.

Technical Summary

In this project, I shall develop new methods to use ligninases to break down waste materials to produce feedstocks for chemicals and fuel manufacturing. The biggest problem with using lignin as a feedstock is that it is very insoluble in water, and this restricts contact between ligninolytic enzymes and the substrate. I shall develop new approaches to contact enzymes with lignin by adjusting the physical and chemical properties of the reaction environment. The emphasis will be on non-toxic, environmentally benign methods. The process will also be extended to mixed wastes containing biopolymers and synthetic polymers, so that domestic and industrial wastes can also be used as biorefinery feedstocks. The upstream feedstock processing system will be integrated with downstream fermentation processes and catalytic reactions. Therefore, new, integrated bio- and chemocatalytic cascade reactions will be developed to avoid the need to isolate the intermediates between each step in the process.

Publications

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Gillian Stephens (Author) (2012) Ionic liquids. Toxic or not? in Chimica Oggi-Chemistry Today

 
Description The original objective was to develop new methods to use ligninases to break down waste materials to produce feedstocks for chemicals and fuel manufacturing. The biggest problem with using lignin as a feedstock is that it is very insoluble in water, and this restricts contact between ligninolytic enzymes and the substrate. In the fellowship and in follow on projects, I have developed new approaches to contact enzymes with lignin by adjusting the physical and chemical properties of the reaction environment. During the course of the fellowship, I began a new collaboration with Lucite International to develop bio-based manufacturing of acrylic polymers, which has led to my lab developing a strong competence in synthetic biology/metabolic engineering, and building on our existing competence in bioprocess development. This collaboration via 4 CASE studentships (now completed) and direct funded projects resulted in 2 published patents on metabolically engineered microorganisms that can produce citramalate (a precursor for chemical production of methacrylic acid) and methacrylic acid directly. Further outcomes from current CASE studentships (3) and a filed patent application are confidential. In addition, I worked on monoclonal antibody production using mammalian cells and biocatalytic reduction of nitroalkenes.
Exploitation Route Lucite aim to commercialise bio-based methylmethacrylate, using results from our collaborative projects.
Sectors Chemicals,Energy,Manufacturing, including Industrial Biotechology,Pharmaceuticals and Medical Biotechnology

 
Description IB Catalyst
Amount £3,097,444 (GBP)
Funding ID BB/N010426/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 04/2016 
End 03/2021
 
Description IB Catalyst
Amount £3,503,876 (GBP)
Funding ID BB/N023773/1 
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 10/2016 
End 09/2021
 
Description IBTI studentship
Amount £92,173 (GBP)
Organisation Biotechnology and Biological Sciences Research Council (BBSRC) 
Sector Public
Country United Kingdom
Start 10/2012 
End 09/2016
 
Description Lucite funding for CASE studentships (7 since 2011, including 3 ongoing) and small grants.
Amount £321,000 (GBP)
Organisation Lucite International 
Department Lucite International UK Ltd
Sector Private
Country United Kingdom
Start 10/2011 
End 09/2019
 
Description Lucite 
Organisation Lucite International
Department Lucite International UK Ltd
Country United Kingdom 
Sector Private 
PI Contribution Nottingham works with Lucite to develop metabolically engineered microorganisms for bio-based methymethacrylate production. We also develop fed-batch and continuous bioprocesses, and methods to solve problems with product toxicity. The work has been done through 7 CASE studentships (Lucite), 2 small projects (Lucite), the P2P grant and our IB catalyst projects, Detox and ConBioChem.
Collaborator Contribution Lucite aim to develop a bio-based route to manufacture methylmethacrylate. Lucite have funded 7 CASE studentships, 2 small projects, have collaborated on the P2P grant and are partners on our IB catalyst projects, Detox and ConBioChem.
Impact GR Eastham, G Stephens, A Yiakoumetti (2016). Process for the biological production of methacrylic acid and derivatives thereof. WO2016185211 A1 L Rossoni, SJ Hall, G Eastham, P Licence and G Stephens (2015) The putative mevalonate diphosphate decarboxylase from Picrophilus torridus is in reality a mevalonate-3-kinase with high potential for bio-production of isobutene. Applied and Environmental Microbiology 81, 2625-2634 doi: 10.1128/AEM.04033-14 GR Eastham, DW Johnson, I Archer, R Carr, J Webb, G Stephens (2015). A Process for Production of Methacrylic Acid and Derivatives Thereof. WO2015022496 Multidisciplinary: Chemistry, Biotechnology, Microbiology, Biochemistry, Molecular Biology
Start Year 2011
 
Title A PROCESS FOR PRODUCTION OF METHACRYLIC ACID AND DERIVATIVES THEREOF 
Description The present invention provides a process for the biological production of the key industrial chemical methacrylic acid and various derivatives thereof including methyl methacrylate. The method comprises using biological pathways to produce mesaconic acid or citraconic acid or citramalic acid, which acids are then decarboxylated to produce methacrylic acid. The acids are substantially non-toxic to cells allowing a viable biobased route to key monomers to be realised. Therefore the invention potentially alleviates the problem of using fossil fuel resources in that it provides an alternative method to form methacrylic acid. 
IP Reference WO2015022496 
Protection Patent application published
Year Protection Granted 2015
Licensed No
Impact None yet
 
Title PROCESS FOR THE BIOLOGICAL PRODUCTIION OF METHACRYLIC ACID AND DERIVATIVES THEREOF 
Description The invention relates to a process of producing methacrylic acid and/or derivatives thereof comprising the following steps: (a) biologically converting isobutyryl-CoA into methacrylyl-CoA by the action of an oxidase; and (b) converting methacrylyl-CoA into methacrylic acid and/or derivatives thereof. The invention also extends to microorganisms adapted to conduct the steps of the process. 
IP Reference WO2016185211 
Protection Patent application published
Year Protection Granted 2016
Licensed No
Impact not yet