Proton signalling in Drosophila photoreceptors
Lead Research Organisation:
University of Cambridge
Department Name: Physiology Development and Neuroscience
Abstract
Photoreceptors transduce light into electrical signals by a series of biochemical steps, each involving specific protein molecules (e.g. visual pigments and enzymes). The end result of this "phototransduction cascade" is the activation of proteins known as "ion channels", in the lipid membrane surrounding the cell. Once activated, ion channels open to allow charged ions, such as sodium and calcium, into the cell, thereby generating electrical signals for transmission to the brain. Phototransduction can be particularly well studied in the fruitfly Drosophila because of the ease with which we can manipulate specific genes (and hence proteins) and because we can record the electrical signals of their photoreceptors with high precision using a technique known as "patch-clamp". The molecules involved in phototransduction are not unique to fly photoreceptors and closely related molecules are found in cells throughout our own bodies. One such molecule is the so-called TRP channel. In flies, this is the channel activated by phototransduction; in mammals, TRP channels are essential for a wide range of vital processes such as hormonal responses, regulation of blood pressure, taste, smell, and sensations of pain, hot and cold.
How TRP channels are activated remains mysterious, although it has long been known that an enzyme, known as phospholipase C (PLC) is often involved. PLC splits a specific small lipid molecule (PIP2) in the cell membrane into two products (called DAG and InsP3). In addition, the reaction also yields a proton (a hydrogen ion), which results in acidification. This simple chemical fact has been largely ignored and never previously considered to be of functional significance. We have recently found that TRP channels can be activated by a combination of acidification and the reduction in concentration of PIP2 in the membrane. We also found that another key molecule in the phototransduction cascade undergoes a change in its structure upon acidification. This molecule, (INAD), is a so-called scaffolding molecule, which normally binds the TRP channel and the PLC enzyme together into a signalling complex; but releases them upon acidification.
Our research builds on these findings, which suggest radical new mechanisms for TRP channel activation and its subsequent inactivation; both involving protons released by PLC. We intend to find out how protons interact with and control the TRP channel protein and how a reduction in PIP2 can control the ability of protons to activate the channel. By designing tailor-made genetically encoded fluorescent probes we also plan to directly image the conformational change in the INAD molecule in living animals. This will permit a range of experiments to determine the mechanism and function of this pH regulated molecular switch. The knowledge we gain from these studies will not only further our understanding of how photoreceptors see but, because the basic underlying biochemical mechanisms are so widely found, will provide new insight into many other, often clinically important processes in the body.
How TRP channels are activated remains mysterious, although it has long been known that an enzyme, known as phospholipase C (PLC) is often involved. PLC splits a specific small lipid molecule (PIP2) in the cell membrane into two products (called DAG and InsP3). In addition, the reaction also yields a proton (a hydrogen ion), which results in acidification. This simple chemical fact has been largely ignored and never previously considered to be of functional significance. We have recently found that TRP channels can be activated by a combination of acidification and the reduction in concentration of PIP2 in the membrane. We also found that another key molecule in the phototransduction cascade undergoes a change in its structure upon acidification. This molecule, (INAD), is a so-called scaffolding molecule, which normally binds the TRP channel and the PLC enzyme together into a signalling complex; but releases them upon acidification.
Our research builds on these findings, which suggest radical new mechanisms for TRP channel activation and its subsequent inactivation; both involving protons released by PLC. We intend to find out how protons interact with and control the TRP channel protein and how a reduction in PIP2 can control the ability of protons to activate the channel. By designing tailor-made genetically encoded fluorescent probes we also plan to directly image the conformational change in the INAD molecule in living animals. This will permit a range of experiments to determine the mechanism and function of this pH regulated molecular switch. The knowledge we gain from these studies will not only further our understanding of how photoreceptors see but, because the basic underlying biochemical mechanisms are so widely found, will provide new insight into many other, often clinically important processes in the body.
Technical Summary
Drosophila phototransduction is mediated by PLC-mediated hydrolysis of PIP2 leading to the opening of TRP and TRPL channels by a mechanism that has long been enigmatic. We recently found that the channels can be activated by a combination of PIP2 depletion and protons released by PLC. Another potential proton target is the INAD scaffolding protein, which assembles TRP, PKC and PLC into "signalplexes". Recently we found that this undergoes a pH dependent conformational change. These results introduce proton release by PLC as a new paradigm in cellular signalling.
A) TRP channel activation. We aim to identify sites on TRP and TRPL involved in gating by mutagenising protonatable residues close to the membrane interface. We will also make measurements of light-induced global and local pH changes using indicator dyes and genetically encoded pH sensitive GFP probes. One way that PIP2 depletion could contribute to activation is by a physical change in the lipid bilayer. Remarkably, we found that photoreceptors contract in response to light. We will test whether this is a direct effect of PIP2 depletion. Another hypothesis is that depletion of PIP rather than PIP2 is key. We will explore this by tracking PIP2 and PIP dynamics with GFP based probes, and by depleting PIP2 with a voltage-sensitive phosphatase that generates PIP from PIP2.
B) INAD. Acidification switches INAD from a reduced state with high affinity for TRP and PLC to an oxidized state with reduced affinity. We will assess the significance of this using mutants that lock INAD in one or other state. We will also test the effects of small-peptide antagonists that compete with TRP and PLC binding to INAD. To assay the conformational state of the complex in vivo we will design GFP probes that bind to only the reduced state. Finally, the role of INAD phosphorylation by PKC will be tested by generating and testing mutants of putative PKC phosphorylation sites.
A) TRP channel activation. We aim to identify sites on TRP and TRPL involved in gating by mutagenising protonatable residues close to the membrane interface. We will also make measurements of light-induced global and local pH changes using indicator dyes and genetically encoded pH sensitive GFP probes. One way that PIP2 depletion could contribute to activation is by a physical change in the lipid bilayer. Remarkably, we found that photoreceptors contract in response to light. We will test whether this is a direct effect of PIP2 depletion. Another hypothesis is that depletion of PIP rather than PIP2 is key. We will explore this by tracking PIP2 and PIP dynamics with GFP based probes, and by depleting PIP2 with a voltage-sensitive phosphatase that generates PIP from PIP2.
B) INAD. Acidification switches INAD from a reduced state with high affinity for TRP and PLC to an oxidized state with reduced affinity. We will assess the significance of this using mutants that lock INAD in one or other state. We will also test the effects of small-peptide antagonists that compete with TRP and PLC binding to INAD. To assay the conformational state of the complex in vivo we will design GFP probes that bind to only the reduced state. Finally, the role of INAD phosphorylation by PKC will be tested by generating and testing mutants of putative PKC phosphorylation sites.
Planned Impact
Staff and students: Staff and students engaged in the research will receive multidisciplinary training in neuroscience, electrophysiology, molecular biology, genetics, imaging and basic lab skills. Previous post-docs/students have become successful not only in academia, but also in a broad range of employment (incl., government, education and hi-tech industry in both UK and abroad). As well as post-docs and PhD students, we engage medical and basic science undergraduate students in lab-based projects, for whom the experience can be inspirational. Apart from lab skills required for the project, staff and students are encouraged and/or required to acquire a variety of further generic skills via courses or teaching experience. I also routinely welcome short-term (up to 3 months) visitors (e.g. from Russia, USA, India and several European countries) to learn specific skills and, by invitation have taught courses on several international graduate schools.
Health practitioners and pharmaceutical industry: TRP channels are the second largest ion channel family in our genome with 28 mammalian members distributed amongst 6 subfamilies. They are ubiquitous, of vital physiological importance, and increasingly implicated in a broad spectrum of hereditary and non-inherited disease. Within the TRPC subfamily alone, they have been implicated in cardiovascular disease (eg hypertension, cardiac hypertrophy); pulmonary disease, cancer, renal disease, rheumatoid arthritis, and neurological disorders such as cerebellar ataxia, bipolar disorder, and myasthenia gravia. TRP channels are hence widely regarded as promising novel therapeutic targets under intensive investigation by several pharmaceutical companies, with clinical trials underway for e.g. TRPV1, TRPM8 and TRPV3. As such my (BBSRC funded) seminal discovery of the first TRP channel has had, and continues to have a huge worldwide impact on clinically oriented research in both academia and the pharmaceutical industry. I was also the first to show that TRP channels could be lipid-regulated - now recognised to be true for many if not most TRP channels. The novel mechanism under study in this proposal -combinatorial activation by lipid and protons - may also prove to be a fundamental, widely conserved mechanism, which may also impact on future product-oriented research in the pharmaceutical industry.
General Public:
We expect the general public to be interested in several aspects of our work:
i) The sensory capabilities of insects, which are very different from our own (eg flies can detect movement up to 10x faster than can we can and can see UV and polarised light)
ii) Related TRP channels in humans mediate many specific sensory experiences - particularly sensations of hot and cold, pain and many tastes (chilli, menthol, horseradish, garlic, oregano, thyme) and play many other vital roles in the body
iii) The contributions Drosophila, as a model genetic organism, can make to our understanding of human biology and disease.
At a more advanced level, our research is widely considered as the definitive account of phototransduction in microvillar photoreceptors: it is taught at both 2nd and 3rd year level at our University and is widely taught in relevant University courses internationally.
Health practitioners and pharmaceutical industry: TRP channels are the second largest ion channel family in our genome with 28 mammalian members distributed amongst 6 subfamilies. They are ubiquitous, of vital physiological importance, and increasingly implicated in a broad spectrum of hereditary and non-inherited disease. Within the TRPC subfamily alone, they have been implicated in cardiovascular disease (eg hypertension, cardiac hypertrophy); pulmonary disease, cancer, renal disease, rheumatoid arthritis, and neurological disorders such as cerebellar ataxia, bipolar disorder, and myasthenia gravia. TRP channels are hence widely regarded as promising novel therapeutic targets under intensive investigation by several pharmaceutical companies, with clinical trials underway for e.g. TRPV1, TRPM8 and TRPV3. As such my (BBSRC funded) seminal discovery of the first TRP channel has had, and continues to have a huge worldwide impact on clinically oriented research in both academia and the pharmaceutical industry. I was also the first to show that TRP channels could be lipid-regulated - now recognised to be true for many if not most TRP channels. The novel mechanism under study in this proposal -combinatorial activation by lipid and protons - may also prove to be a fundamental, widely conserved mechanism, which may also impact on future product-oriented research in the pharmaceutical industry.
General Public:
We expect the general public to be interested in several aspects of our work:
i) The sensory capabilities of insects, which are very different from our own (eg flies can detect movement up to 10x faster than can we can and can see UV and polarised light)
ii) Related TRP channels in humans mediate many specific sensory experiences - particularly sensations of hot and cold, pain and many tastes (chilli, menthol, horseradish, garlic, oregano, thyme) and play many other vital roles in the body
iii) The contributions Drosophila, as a model genetic organism, can make to our understanding of human biology and disease.
At a more advanced level, our research is widely considered as the definitive account of phototransduction in microvillar photoreceptors: it is taught at both 2nd and 3rd year level at our University and is widely taught in relevant University courses internationally.
People |
ORCID iD |
Roger Hardie (Principal Investigator) |
Publications
Asteriti S
(2017)
Calcium signalling in Drosophila photoreceptors measured with GCaMP6f.
in Cell calcium
Bollepalli MK
(2017)
Phototransduction in Drosophila Is Compromised by Gal4 Expression but not by InsP3 Receptor Knockdown or Mutation.
in eNeuro
Chu B
(2013)
Common mechanisms regulating dark noise and quantum bump amplification in Drosophila photoreceptors.
in Journal of neurophysiology
Chu B
(2013)
Fractional Ca(2+) currents through TRP and TRPL channels in Drosophila photoreceptors.
in Biophysical journal
Dau A
(2016)
Evidence for Dynamic Network Regulation of Drosophila Photoreceptor Function from Mutants Lacking the Neurotransmitter Histamine.
in Frontiers in neural circuits
Hardie RC
(2015)
In vivo tracking of phosphoinositides in Drosophila photoreceptors.
in Journal of cell science
Hardie RC
(2014)
Photosensitive TRPs.
in Handbook of experimental pharmacology
Hardie RC
(2012)
Photomechanical responses in Drosophila photoreceptors.
in Science (New York, N.Y.)
Hardie RC
(2015)
Phototransduction in Drosophila.
in Current opinion in neurobiology
Juusola M
(2017)
Microsaccadic sampling of moving image information provides Drosophila hyperacute vision
in eLife
Description | 1) We made the remarkable discovery that fly photoreceptors physically contract in response to light and developed methodology, using atomic force microscopy (AFM) to precisely quantify these photomechanical contractions. The contractions (latency ~ 5ms) were faster than electrical responses to light. We also found that electrical light responses were facilitated by stretching the membrane. Like the electrical response to light the contractions were entirely dependent on an enzyme, PLC, which cleaves the large headgroup of a lipid molecule (PIP2) from the inner leaflet of the cell membrane. These results suggest that the light sensitive channels (TRP and TRPL) may be activated mechanically by the physical consequences of PIP2 hydrolysis, in combination with the protons released by the phospholipase C reaction. 2) To test this idea we manipulated the mechanical properties of the lipid membrane by controlling the saturated/unsaturated fatty acid content of the diet. We found that flies reared on a diet lacking unsaturated fatty acids had ca 8-times greater proportion of saturated fatty acids in their lipid membranes, which makes the membranes stiffer. As a result, their photoreceptors responded approximately 3 times more slowly to light. Detailed analysis suggested that this effect was mediated at the level of the light-sensitive channels and their sensitivity to membrane tension. The effects of dietary fatty acid on health and disease are extensively documented. For example ?-3 and ?-6 deficiency is associated with cardiovascular disease and diabetes and can lead to cognitive defects in rodents. Nevertheless, the underlying mechanisms are poorly understood, and in this respect, our results provide a striking and novel example of how dietary fatty acids can profoundly and specifically influence in vivo performance and behavior via a defined step within the context of a classical signaling cascade. 3) Our earlier work had indicated that the second key factor in channel activation might be acidification (protons): to study the molecular basis for this we have looked for protonatable amino-acids residues on the channels. We identified a group of three residues in a key part of the channel protein believed to be critical for channel opening.When these were mutated to, sensitivity to light and protons was systematically altered. We also developed a pH-sensitive fluorescent probe which was genetically targeted to the phototransduction compartment ("rhabdomere") of the photoreceptors. This has allowed us to precisely measure the pH changes and their intensity dependence with a millisecond time resolution. 4) We successfully developed genetically encoded indicators for PIP2 and PIP and are using these for detailed in vivo measurements of phosphoinositide turnover. We also successfully targeted a genetically encoded voltage sensitive phosphatase to the photoreceptors and used this to directly deplete PIP2. Inter alia, this allowed us to directly measure the time course of the final step in PIP2 resynthesis (phosphorylation of PIP to PIP2) |
Exploitation Route | These results represent a new paradigm in signal transduction. Transgenic flies expressing our new rhabdomere targeted lipid probes are freely available to the research community. |
Sectors | Education,Pharmaceuticals and Medical Biotechnology |
URL | http://www.cam.ac.uk/research/news/surprising-solution-to-fly-eye-mystery |
Description | This research is of a fundamental curiosity and hypothesis driven nature. Nevertheless the findings have captured the imagination of both the academic and interested layman. It was widely reported/reviewed in broad readership journals incl Science, Nature Neuroscience, Current Biology, popular scientific press (eg New Scientist, BBSRC Research News and several popular science websites). It has already been incorporated into undergraduate courses in both UK and abroad (eg USA). |
First Year Of Impact | 2012 |
Sector | Education,Pharmaceuticals and Medical Biotechnology |
Impact Types | Cultural,Societal |
Description | European Commission |
Amount | € 183,455 (EUR) |
Funding ID | 658818 |
Organisation | European Commission |
Department | Horizon 2020 |
Sector | Public |
Country | European Union (EU) |
Start | 11/2015 |
End | 11/2017 |
Title | Dynamic In vivo monitoring of various protein/intermediates |
Description | We have generated range of GFP-tagged constructs for monitoring a variety of cellular processes (including protein translocation, phospholipid metabolism and pH) in real time with millisecond resolution. By targetting these to the Drosophila eye, measurements can be made in completely intact animals over extended periods as well as in acutely dissociated cells |
Type Of Material | Physiological assessment or outcome measure |
Year Produced | 2012 |
Provided To Others? | Yes |
Impact | We have already published a number of papers using this technology in high impact journals (eg Neuron). |
Title | Genetically encoded calcium probes |
Description | Transgenic flies expressing a variety of genetically encoded Calcium and pH sensitive fluorescent probes |
Type Of Material | Model of mechanisms or symptoms - non-mammalian in vivo |
Year Produced | 2017 |
Provided To Others? | Yes |
Impact | So far academic impact only ( first paper Feb 2017). Flies have been distributed on request to other researchers |
Description | Arrestin interactions and translocation |
Organisation | Purdue University |
Country | United States |
Sector | Academic/University |
PI Contribution | Our contribution included intellectual input, electrophysiology, imaging and molecular biology. I was corresponding or joint corresponding authors on three major publications arising from this collaboration. Post-docs funded on the grants (Huang and Liu) worked on these projects |
Collaborator Contribution | Intellectual (project design and development) Immunocytochemistry Generation of transgenic flies In vivo confocal imaging of GFP tagged probes |
Impact | Liu CH, Satoh AK, Postma M, Huang J, Ready DF, Hardie RC (2008) Ca2+-dependent metarhodopsin inactivation mediated by Calmodulin and NINAC myosin III. Neuron 59:778-789. Satoh AK, Xia H, Yan L, Liu CH, Hardie RC, Ready DF (2010) Arrestin translocation is stoichiometric to rhodopsin isomerization and accelerated by phototransduction in Drosophila photoreceptors. Neuron 67:997-1008. Sengupta S, Barber TR, Xia H, Ready DF, Hardie RC (2013) Depletion of PtdIns(4,5)P2 underlies retinal degeneration in Drosophila trp mutants. J Cell Sci 126:1247-1259. plus presentations (invited) at various meetings |
Start Year | 2006 |
Description | Atomic Force Microscopy |
Organisation | University of Cambridge |
Department | Department of Pathology |
Country | United Kingdom |
Sector | Academic/University |
PI Contribution | Intellectual (designed project, wrote paper) Electrophysiology |
Collaborator Contribution | Atomic force microscope measurements of photoreceptor contractions |
Impact | publs. include Hardie RC, Franze K (2012) Photomechanical responses in Drosophila photoreceptors. Science 338:260-263. Randall AS, Liu CH, Chu B, Zhang Q, Dongre SA, Juusola M, Franze K, Wakelam MJ, Hardie RC (2015) Speed and sensitivity of phototransduction in Drosophila depend on degree of saturation of membrane phospholipids. J Neurosci 35:2731-2746. plus invited presentations at several meetings and coverage in popular scientific press and websites |
Start Year | 2011 |
Description | Lipidomics |
Organisation | Babraham Institute |
Department | Signalling |
Country | United Kingdom |
Sector | Charity/Non Profit |
PI Contribution | Performed electro- and optophysiological experiments |
Collaborator Contribution | Lipidomic analysis of retinal phospholipids |
Impact | One publication (Randall et al 2015 J Neuroscience 35:2731 |
Start Year | 2013 |
Description | Display at Department's Centenary Celebration |
Form Of Engagement Activity | Participation in an open day or visit at my research institution |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | ~30 6th formers and interested public attended demonstration of use of GFP in biological research Visitors to display were enthusiastic |
Year(s) Of Engagement Activity | 2014 |
Description | Publicity following publication of Science article (Hardie and Franze 2012) |
Form Of Engagement Activity | A press release, press conference or response to a media enquiry/interview |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Media (as a channel to the public) |
Results and Impact | I publicised the results of our Science article (Hardie & Franze 2012 "Photomechanical responses in Drosophila photoreceptors" Science 338,260) on the University Research News website and gave several interviews to various media outlets by phone and in person - including New Scientist, and BBC's "Naked Scientist) . The work was reported in perspectives/commentaries in many Scientific journals (incl. New Scientist, Nat Neuroscience, Science, Current Biology, J Gen Physiology , J Exp Biology BBSRC research news, Faculty 1000 and many popular science websites.) |
Year(s) Of Engagement Activity | 2012 |
URL | http://www.cam.ac.uk/research/news/surprising-solution-to-fly-eye-mystery |
Description | Radio interview for BBC World Service |
Form Of Engagement Activity | A broadcast e.g. TV/radio/film/podcast (other than news/press) |
Part Of Official Scheme? | No |
Geographic Reach | International |
Primary Audience | Media (as a channel to the public) |
Results and Impact | Visited and interviewd by presenter of BBC World Service "Crowd Science" program. Broadcast Aug 31 2017 and extended information included in a feature on the BBC "Science & Environment" website |
Year(s) Of Engagement Activity | 2017 |
URL | http://www.bbc.co.uk/news/science-environment-41284065 |
Description | School visit |
Form Of Engagement Activity | A talk or presentation |
Part Of Official Scheme? | No |
Geographic Reach | Local |
Primary Audience | Schools |
Results and Impact | ~50 6th form students attended a talk based on research in our lab, aimed to stimulate an interest in a scientific career No concrete feedback |
Year(s) Of Engagement Activity | 2012 |