A Drosophila-Herpetomonas model as a blueprint to study Leishmania infection in phlebotomine sand flies.

Lead Research Organisation: University of Oxford
Department Name: Biochemistry

Abstract

Neglected tropical diseases (NTDs) like sleeping sickness, leishmaniasis, hookworm infections, river blindness and elephantiasis are the most common infections of the world's poorest people and the leading causes of chronic disability and poverty in low- and middle-income countries. NTDs especially affect children and young women of reproductive age and consequently deprive them of their health and economic potential. NTDs also impair agricultural productivity and are an important reason why the world's poorest 1.4 billion people who live below the poverty line cannot escape destitution and despair. For example, human sleeping sickness caused by african trypanosomes is endemic to 36 countries in sub-Saharan Africa with 70 million of the 400 million inhabitants at risk. The continent is recovering from an epidemic (300-500 000 cases in 1998) and recent estimates suggest that there are currently 50-70 000 people infected per year [World Health Organization (WHO) report, 2006]. Sleeping sickness is fatal if left untreated. The related disease (nagana) in domesticated animals causes estimated losses to African agriculture of US$4.5 bn per year and has had a profound effect on development of the continent. However, this is not a problem in one continent: Leishmaniasis, caused by several species of Leishmania is endemic in India, Bangladesh, Nepal, Sudan and South and Latin America, while the existence of an underbelly of Leishmaniasis among the poorest people in the South of the USA came recently into sharp focus.

Despite the devastating effect of these diseases on health and development, with evidence that their global burden is as great as that of any other serious disease, financial support for control and elimination efforts, as well as research and development (R&D), have been inadequate. Indeed, in Millennium Development Goal 6 (to "combat HIV/AIDS, malaria and other diseases"), NTDs were not even specifically mentioned but merely considered as part of the "other diseases" (United Nations Report 2009). However, policy makers are slowly beginning to appreciate the importance of NTDs. WHO has a new Department of Neglected Tropical Diseases (WHOTDR), which has a new 10-year strategic plan with support from UN agencies, member states, and private philanthropies. However, an integrated offensive to tackle NTDs is needed. Action must be taken both at the field and drug delivery level as well as at the R&D level. There are a lot of things we are unable to understand about NTDs during the transmission process in the invertebrate host and the life of the parasite inside its insect vector, however working with the insect vectors themselves has proven to be very difficult in technical terms (developing of colonies in the lab, genetic transformation, functional genetics and genomics).

This proposal suggests going back to the basic biology of the insect-parasite interaction by using a model "hopping" approach. The fruit fly Drosophila melanogaster has proven informative in immunity studies with its relevance and contribution recognized in the 2011 Nobel prize for Physiology and Medicine. However, the model "hopping" approach that we propose here is a comparative approach, which goes far beyond the level of generic innate immune signalling and looks at comparing gut-specific responses of insect vectors like sand flies (Leishmania vector) following parasite infection with the more easy to culture and do experiments with, fruit fly. We will uncover by DNA microarray experiments and tissue specific RNAi, the host genes responding to Herpetomonas gut infection in fruit flies. We will then knock-down those conserved in sand flies following Leishmania infection. Drosophila and sand flies belong to the same order (they are dipteran insects) and comparing them offers the potential to uncover evolutionary conserved or contrasting functional characteristics in their immune response towards their respective protozoan parasites.

Technical Summary

For the vast majority of vector borne parasites the ability to overcome the insect midgut defences is central to transmission. However, for many such diseases we know virtually nothing about the molecular mechanisms involved. For vectors such as tse-tse flies and sand flies the prospect for rapidly improving our understanding of key interactions occurring in the midgut when challenged by parasites, is bleak. This is because the 'tool box' required untangling the interactions is very unlikely to be rapidly developed. For example, there is no realistic prospect of producing transgenic technology for tsetse flies because eggs are inaccessible due to intrauterine development of larvae; maintenance of multiple lines of either tsetse or sand flies permitting genetic studies is impossible because of the cost and complexity of culturing colonies; bioinformatic resources are still in their infancy. In this application we suggest that under these circumstances a comparative approach in which kinetoplastid interactions in Drosophila melanogaster are studied in the first instance, will permit us to make significant progress in understanding the more important cases of insect-parasite interactions (in this case Leishmania in sandflies). Herpetomonas ampelophilae is a natural kinetoplastid parasite of D. melanogaster, which establishes infection in the midgut of the fly and can go on to invade the salivary glands. We now have this protozoan in culture and intend, through a combination of genomics, cell biology and RNAi experiments to identify the gut-specific host genomic contingent involved in parasite challenge and compare to sandflies. In addition, we will study the interaction between the indigenous flora and the parasite and the role of the former in protecting the host from parasite infection. These studies will outline the major immune pathways by which insects respond to kinetoplastid challenge in the midgut and the role of the gut flora in determining vectorial capacity

Planned Impact

It is the first time that a model "hopping" approach will be tried in the context of Neglected Tropical Diseases (NTDs). This approach will transform the limited and fragmented knowledge we have of the genes involved in the gut response of important NTD insect vectors to parasite challenge. This transformation will stem from the fact that for the first time we are going to have a global, functional view of the gut-specific host genomic contigent involved in response to parasite challenge. Our holistic approach is also taking into account the interaction between the intestinal microflora and the parasite and how this interaction is influenced by changes in host gut-specific gene expression.
It is important to note that the data of the sand fly genome (a project in which co-applicant Dillon is the major player) are just going to become available in their annotated form giving a sense of urgency to the project. Finally, from the fruit fly host perspective, the proposed work will be the first time that a kinetoplastid parasite-Drosophila interaction will be analysed at the molecular level and the results will be a reference point for comparisons of similar host-parasite interactions in other Diptera (e.g. tsetse flies and mosquitos).

Publications

10 25 50
 
Description Neglected Tropical Diseases are the most common diseases of the world's poorest people. Many are caused by parasites called trypanosomatids that are transmitted to humans via insects belonging to the order of Diptera (also known as true flies). These flies (including tsetse, sand flies and black flies) are difficult to study in the lab and so the prospect of rapid progress in the basic biology of fly-parasite interaction is bleak. However, a model dipteran species with an extensive "tool-box" is the fruit fly Drosophila melanogaster with its natural trypanosomatid Herpetomonas muscarum. Here we establish the framework of their interaction with the view that part of this interaction will represent an evolutionary conserved component of the dipteran response to parasite infection and will inform more targeted studies into medically important but difficult to study Diptera.
Exploitation Route To find ways to increase resistant of insect vectors like sand flies refractory to Leishmania parasite infection by preventing parasite establishment in the gut.
Sectors Healthcare,Pharmaceuticals and Medical Biotechnology

URL https://www.ebi.ac.uk/ena/data/view/PRJEB30020
 
Description Using comparative genomics we now have a good idea about the evolutionary conservation of early responses of two very syntenic trypanosomatid parasites namely, Herpetomonas muscarum and Leishmania major. These early responses are important for parasite establishment. We sequenced the genome of monoxenous trypanosomatid Herpetomonas muscarum and its transcriptome during in vitro culture and during infection of its natural insect host D. melanogaster. The H. muscarum genome is broadly syntenic with that of human parasite Leishmania major. We also found strong similarities between the H. muscarum transcriptome during fruit fly infection, and those of Leishmania during sand fly infections. Overall this suggests Drosophila-Herpetomonas is a suitable model for less accessible insect-trypanosomatid host-parasite systems such as sand fly-Leishmania. Looking at both sides of the insect vector-parasite interaction, we have now also a good idea about the responses of the sand fly P. papatasi (old world sand fly) to specific trypanosomatid parasites including L. major and H. muscarum. Novel strategies for disease control, require a better understanding of the key step for transmission namely, the establishment of infection inside the fly. In this work we wanted to identify fly transcriptomic signatures associated with infection success or failure. We used next generation sequencing to describe the transcriptome of the sand fly Phlebotomus papatasi when fed with blood alone or with blood containing one of three trypanosomatids: Leishmania major, Leishmania donovani and Herpetomonas muscarum: a parasite not transmitted to humans. Of these, only L. major was able to successfully establish an infection in P. papatasi. However, the transcriptional signatures observed were not specific to success or failure of infection but a generalised response to the blood meal. This implies that sand flies perceive Leishmania as just a feature of their microbiome landscape and that any strategy to tackle transmission should focus on the response towards the blood meal rather than parasite establishment. With this info in hand, we will search for ways to block L. major establishment in the sand fly's midgut and thus attempt to block transmission.
First Year Of Impact 2020
Sector Healthcare
Impact Types Societal,Policy & public services

 
Title RNA-seq of Phlebotomus papatasi during trypanosomatid infection 
Description RNA-seq of Phlebotomus papatasi after feeding with blood or blood containing Leishmania major (established infection in the insect gut) or blood containing Leishmania donovani (does not establish infection in the insect gut) or blood containing Herpetomonas muscarum (it is not a natural parasite genus for sand flies). 
Type Of Material Data analysis technique 
Year Produced 2020 
Provided To Others? Yes  
Impact The results show that there is no difference in the transcriptional response of the insect when comparing non-infected blood meal and parasite-contaminated blood meal. This brings forward the possibility that the parasites (especially L. major, which establishes infection) suppresses sand fly immunity. 
URL https://www.ebi.ac.uk/ena/browser/view/PRJEB35592
 
Description Genome sequencing and transcriptomics of Drosophila-Herpetomonas interaction 
Organisation The Wellcome Trust Sanger Institute
Country United Kingdom 
Sector Charity/Non Profit 
PI Contribution We have contributed Drosophila-Crithidia and Drosophila-Herpetomonas transcriptomics data analysed from the side of the host (Drosophila).
Collaborator Contribution Sequencing of Herpetomonas genome. RNA-seq of Herpetomonas in culture and the Drosophila-Herpetomonas interaction.
Impact No this is ongoing
Start Year 2014
 
Description Studying autophagy and Innate Immunity in a Drosophila model 
Organisation University of Warwick
Country United Kingdom 
Sector Academic/University 
PI Contribution We are collaborating with Dr Ioannis Nezis Associate Professor at Warwick Life Sciences to study the interaction between autophagy and innate immunity in Drosophila. We are contributing the infection biology experiments both in flies as well as in cell culture.
Collaborator Contribution Developing tools to study autophagy in innate immune pathways on both cell culture and whole flies
Impact We are planning to write a manuscript for publication and apply for RCUK funding.
Start Year 2016
 
Description School visits 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact During Science week in primary schools here in Oxford I am visiting primary schools in the North Oxford area and present insects and discuss with pupils where these insects grow and what kind of defenses these insects need to have in order to survive in such an adverse environment

Pupils were keen to draw insects and to prepare little posters about insect development and the different habitants where insects live.
Year(s) Of Engagement Activity 2007,2008,2010,2011,2013