Engineering wheat for take-all resistance

Lead Research Organisation: National Institute of Agricultural Botany
Department Name: Centre for Research

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

Technical Summary

Take-all disease has a substantial impact on wheat yield throughout the cereal-growing areas of the world and is a major threat to food security. The cost of this fungal disease to wheat production in the UK is estimated at £85-340m per annum. Take-all is a ubiquitous and chronic problem that that imposes serious limitations on wheat production as roughly half of UK wheat crops are affected. Introduction of genes through conventional breeding strategies relies on the identification of resistances through screening, and subsequent crossing into elite varieties, and is the approach taken in the wheat pre-breeding LoLa (BB/J004596/1). Our proposal takes a complementary approach that involves the direct introduction of cloned genes for take-all resistance into wheat through genetic modification (GM) which has the potential for more rapid delivery of useful genes into elite wheat varieties.

We have assembled a customised toolkit for triterpene metabolic engineering in plants consisting of characterised genes and enzymes from oat and other plant species. Our aim is to engineer single and multiple steps for triterpene synthesis into hexaploid wheat and evaluate the consequences of this for triterpene production, plant performance and take-all resistance. The development of methods for high-efficiency transformation of wheat with multiple genes within this proposal will lay the foundation for introduction of other valuable multi-gene traits/processes (e.g. nitrogen fixation, C4 photosynthesis, polygenic pest/pathogen resistance, seed micronutrient content) into wheat in the future.

The key deliverables and outcomes of this research programme will be:
1. Evaluation of a transgenic approach to engineer wheat for the synthesis of protective triterpenes;
2. Establish a multi-gene wheat transformation platform;
3. Provide industry with a potential solution to take-all disease;
4. Training of project scientists in cross-disciplinary and applied crop research

Planned Impact

The most important impact of this research will be the evaluation of a metabolic engineering strategy for control of take-all disease of wheat. This has the potential to provide the plant breeding industry with a strategy for disease control that will complement longer-term strategies currently being initiated within the wheat pre-breeding LoLa. There are many environmental and economic costs associated with take-all that have a detrimental effect on the overall competitiveness and sustainability of the UK arable industry. Introduction of take-all resistance into cultivated wheat will have a profound impact on reducing these negative externalities across the production sector.

We expect there to be a number of different beneficiaries of the proposed work. These will include the private sector in the form of wheat farmers and breeding companies, the UK environment, policy makers, and the wider public in general. Many of the expected benefits will be shared between groups and we have outlined some of these below:

- Increased yields: At least half of UK wheat crops are affected by take-all, with average yield losses between 5-20% and complete failure of the crop under severe take-all conditions. The average UK wheat production value is ~£1.7 b. Therefore the minimum cost of take-all to the UK arable industry is between £85m - 340m per annum. The availability of take-all resistant wheat would significantly reduce this loss and provide increased flexibility to farmers.
- Testing the potential of GM approaches: This work will test the potential of a GM approach to take-all control. The multi-gene wheat transformation platform established within this programme will provide cutting-edge enabling technology for academic researchers and industry for future wheat improvement for disease resistance and other important traits/processes (e.g. nitrogen fixation).
- More efficient use of nitrogen fertilization: Take-all disease leads to reduced uptake of nitrogen by the roots. Not only is this inefficient and costly but the remaining nitrogen leaches into farmland water courses, so contributing to pollution and eutrophication. Improving resistance to take-all would therefore have both direct financial benefits (reduced nitrogen requirements of second and third wheat crops) and indirect consequences of improving nitrate utilisation, reducing wastage and increasing overall competitiveness of UK wheat growers.
- More efficient land use: Improved take-all resistance will result in increased yields in second and third wheat situations, enabling more wheat to be produced from the same amount of land. This will help in the sustainable intensification of UK agriculture, increasing the efficiency of land use and providing farmers with enhanced flexibility in their farm management practices.
- Training the next generation of crop scientists: This proposal brings together a unique combination of disciplines that will provide an exciting training ground for the project scientists involved. The resulting innovation and training will provide the next generation of skilled crop scientist, with benefits beyond the plant breeding industry, and boosting the UK economy.

Publications

10 25 50
 
Description A toolkit for terpene engineering of plants for food, health and industrial biotechnology applications has been established. Single and multiple gene constructs for triterpene synthesis have been created in collaboration with JIC, and transformed into wheat at NIAB. Wheat lines engineered to produce triterpene scaffolds have been generated and the scaffold molecules detected in extracts of transgenic wheat by metabolite analysis at JIC. Lines that have been engineered to both produce and modify these scaffolds have been generated and are currently being characterised. Wheat lines transformed with three genes required for the synthesis and addition of an acyl group to the triterpene scaffold (a step that is important for antimicrobial activity) have been generated and shown to make the expected product. Homozygous material has been developed for several of the earliest of these lines. A promoter set from an oat metabolic gene cluster has been generated and tested in wheat. Importantly within this project we have shown that these root-expressed promoters from oat retain their characteristic expression pattern (in the outer cell layer of the root tips) when introduced into wheat. More complex constructs have now been generated with the pathway split over tow or three T-DNAs or as a single T-DNA. Transgenic wheat plants have been generated with these metabolic constructs and homozygous lines generated. This material is currently being analysed for production of novel metabolites by the lead PI, Prof. Ann Osbourn at JIC.
Exploitation Route Technology improvements will be provided to our collaborators at JIC and elsewhere.
Sectors Agriculture, Food and Drink

 
Description The findings of research provide evidence that a complex metabolic pathway can be re-constructed in wheat using transgenic technology. A number of methods for making large or multi-gene constructs for plant metabolic engineering have been established at NIAB and JIC. These constructs have been transformed into wheat where the genes are expressed from constitutive or root specific promoters. We have successfully generated transgenic wheat lines producing triterpene scaffolds, so providing the fou
First Year Of Impact 2015
Sector Agriculture, Food and Drink
Impact Types Societal

 
Title Production of 111 transgenic wheat plants for Sad1 and Sad2 promoter evaluation 
Description Production of 111 transgenic wheat plants from 8 constructs to evaluate whether the Sad1 and Sad2 promoters from oat are active in wheat 
Type Of Material Biological samples 
Year Produced 2014 
Provided To Others? Yes  
Impact Materials analysed both at NIAB and JIC at RNA and protein level, to demonstrate whether the Sad1 and Sad2 promoters from oat are active in wheat. 
 
Title Transfer of seed from 4 GM wheat lines transformed with 3 promoter-reporter constructs 
Description Evaluation of whether the Sad1 and Sad2 promoters from oat are active in wheat 
Type Of Material Biological samples 
Year Produced 2014 
Provided To Others? Yes  
Impact These promoters would be used to express specific genes of interest for both Engineering Resistance to Takeall project and the ENSA project at JIC 
 
Description 2015 NIAB Directors Day posters and GM materials display talk on Crop Transformation 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Demonstration of crop transformation. Discussion with visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM, new technologies, and the range of genes/traits included in the Community Resource for wheat Transformation project.
Year(s) Of Engagement Activity 2015
 
Description Bill & Melinda Gates Grand Challenges mtg 2016 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Emma Wallington attended the Bill & Melinda Gates Grand Challenges held in London. Had the opportunity to discuss our crop transformation research with a very wide range or participants during the workshops.
Year(s) Of Engagement Activity 2016
 
Description Cambridge Science festival, March 2014 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Schools
Results and Impact Encoraged young acedemics to consider agriculture and plant science research

Interest in science
Year(s) Of Engagement Activity 2014
 
Description Cambridge University DTP student cohort visit 2016 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Overview of crop transformation projects at NIAB. Discussion with visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM, plus our implementation of new technologies such as CRISPR/Cas9 gene editing in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2016
 
Description Chief Scientific Adviser & Chief Plant Health Officer visit 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Policymakers/politicians
Results and Impact Emma Wallington gave an overview of our GM projects with wheat, rice and OSR transformation. Particular focus on disease resistance targets within the Community Resource for Wheat Transformation and the Engineering Resistance to Takeall projects
Year(s) Of Engagement Activity 2016
 
Description Demonstration on GM for Sainsbury produce managers 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Industry/Business
Results and Impact Demonstration of crop transformation. Discussion with visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM
Year(s) Of Engagement Activity 2015
 
Description ENSA workshop on Cereal Engineering, Norwich. EW invited presentation on CRWT and Takeall projects 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other academic audiences (collaborators, peers etc.)
Results and Impact Discussion of challenges in the CRWT and Takeall projects, in common with other genome engineering projects in the UK

Interest in the NIAB Crop transformation platform from participants.
Year(s) Of Engagement Activity 2014
 
Description EW Interview broadcast on Cambridge TV (new Ofcom-licensed channel for Cambridge). 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Film for broadcast on Cambridge TV (new Ofcom-licensed channel for Cambridge).
EW described how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM. Claviceps (ergot) resistance project also demonstrated in NIAB Innovation Farm.
Year(s) Of Engagement Activity 2015
URL http://www.cambridge-tv.co.uk/gm-foods/
 
Description Exhibit at Cereals 2017, Boothby Graffoe, Lincolnshire 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Industry/Business
Results and Impact Exhibit on the NIAB stand with demonstrations of wheat tissue culture and the effect of takeall fungus infection on wheat roots, plus preliminary project results. This provided an excellent visual demonstration of a project which uses genetic modification to tackle a disease in wheat for which there is no resistance which can be bred in traditionally. Visitors to the stand were very interested to see the impact of the fungus on roots and to discuss the strategy and progress made in the project with the NIAB staff involved. Whilst this is primarily a national event, there were also a good number of international visitors (wheat breeders and scientists) who were interested and engaged with us over the two day event.
Year(s) Of Engagement Activity 2017
 
Description Fascination of Plants Day 2013: GM wheat - How and Why 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Non-inoculated tissue culture demonstration of wheat transformation and regeneration for the general public as part of the Fascination of Plants Day held at the University of Cambridge Botanic Garden. We focussed on the Takeall project as an example of how a disease resistance mechanism from oats might be transferred to wheat by GM technology.

Many conversations with interested A-level/undergraduate students and members of the general public
Year(s) Of Engagement Activity 2013
 
Description Fascination of Plants Day: GM exhibit to general public 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact To inform the general public on how and why we are making GM wheat, and discuss the various projects undertaken

Increased understanding of the differences between GM and traditional breeding techniques
Year(s) Of Engagement Activity 2013
 
Description Indian Female Leaders in Crop and Ag Science workshop 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Emma Wallington gave a presentation of our GM projects with wheat, rice and OSR plus new developments in the technology such as CRISPR/Cas9 gene editing technology, and examples of how we are using this technology in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2016
 
Description Innovative Plant Science, Future farming event held at the House of Lords, Westminster. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Policymakers/politicians
Results and Impact Overview of our GM projects with wheat, rice and OSR plus new developments in the technology. Wheat project focus on Community Resource for Wheat Transformation and Takeall projects
Year(s) Of Engagement Activity 2016
 
Description International Wheat Yield Parnership meeting at NIAB - oral presentation 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact interest in further projects
Year(s) Of Engagement Activity 2018
 
Description Interview for Sense about Science case study on engineering wheat for takeall resistance 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Not known if the case study was taken forward by the sense about Science team

none at this point
Year(s) Of Engagement Activity 2013
 
Description Invited plenary lecture at the InnovAg Translational Photosynthesis meeting in Brisbane, Australia - June 2019 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Plenary lecture
Year(s) Of Engagement Activity 2019
URL http://photosynthesis.org.au/innovag/
 
Description Invited talk at the International Wheat Congress - satellite mtg - July 2019 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact AB stood in for EW at short notice due to a bereavement. Talk included highlights in wheat transformation of complex biosynthetic pathways and gene editing success.
Year(s) Of Engagement Activity 2019
 
Description NIAB Directors Day -GM materials and posters display 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Policymakers/politicians
Results and Impact Visitors were very interested in the presentations and materials displayed and discussed the both the ongoing projects and public perception of GM

Better understanding of the projects using GM technology at NIAB
Year(s) Of Engagement Activity 2014
 
Description NIAB Directors Day displays 2016 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Practical demonstrations of crop tissue culture plus an overview of our GM projects focused on wheat, rice and OSR. We also included explanations of CRISPR/Cas9 gene editing technology, and examples of how we are using this in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2016
 
Description NIAB Open Day 2016 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Practical demonstrations of crop tissue culture plus an overview of our GM projects focused on wheat, rice and OSR. We also included explanations of CRISPR/Cas9 gene editing technology, and examples of how we are using this in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2016
 
Description NIAB Open Day display 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Exhibit in the NIAB marquee covering a number of BBSRC funded projects using crop transformation. Demonstrations of wheat tissue culture and the effect of takeall fungus infection on wheat roots provided an excellent visual demonstration of a project which uses genetic modification to tackle a disease in wheat for which there is no resistance which can be bred in traditionally. Other exhibits demonstrated our implementation of gene editing techniques and its use in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2017
 
Description NIAB Open day Science morning (2015) 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Demonstration of crop transformation. Discussion with visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM, new technologies, and the range of genes/traits included in the Community Resource for wheat Transformation project.
Year(s) Of Engagement Activity 2015
 
Description NIAB Open day and Science seminars (2014) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Seminar on current NIAB Crop Transformation group projects followed by a practical demonstration of crop transformation and tissue culture. Discussion with visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM. There was a lot of interest from the visitors in the demonstrations and discussion with the Crop Transformation team members.

Level of general interest was high
Year(s) Of Engagement Activity 2014
 
Description NIAB Poster Day 2016 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Practical demonstration of tissue culture using a number of contrasting crop species plus an overview of crop transformation projects at NIAB. Discussion with wider NIAB staff and visitors on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM, plus our implementation of new technologies such as CRISPR/Cas9 gene editing in a number of wheat and rice projects.
Year(s) Of Engagement Activity 2017
 
Description Nottingham MSc students visit (2015) 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact Demonstration of crop transformation. Discussion with students on how and why we make GM wheat crop plants using Takeall disease as an example of a project which could not be achieved without GM, and the range of genes/traits included in the Community Resource for wheat Transformation project.
Year(s) Of Engagement Activity 2015
 
Description Oral presentation at the Monogram (small grain cereals) meeting in Bristol 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Oral presentation by Emma Wallington on "Engineering wheat for take-all resistance" given at the Monogram (small grain cereals) meeting at the University of Bristol, 2017
Year(s) Of Engagement Activity 2014,2017
 
Description Quantitative Statistics Course, NIAB: talk on NIAB Crop Transformation featuring CRWT project 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Discussion with course participants

Increase the breadth of interest in the project, and crop transformation capabilities at NIAB
Year(s) Of Engagement Activity 2014
 
Description Taking on takeall 
Form Of Engagement Activity A magazine, newsletter or online publication
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Article written for the NIAB publication, Landmark on the Takeall project.

Increased interest in the project from visitors
Year(s) Of Engagement Activity 2013
 
Description Talk with GM materials on Crop Transformation for NIAB Regional staff event 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Demonstration of crop transformation. Discussion with farm trials teams and agronomists on how and why we make GM wheat and OSR, new developments in the technology new technologies and the range of genes/traits included in the Community Resource for wheat Transformation project and social implications
Year(s) Of Engagement Activity 2012,2016
 
Description Talk with display materials on Crop Transformation for Cambridge University students 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Undergraduate students
Results and Impact Demonstration of crop transformation. Discussion with farm trials teams and agronomists on how and why we make GM wheat and OSR, new developments in the technology new technologies and the range of genes/traits included in the Community Resource for wheat Transformation project and social implications
Year(s) Of Engagement Activity 2015
 
Description UEA/JIC MSc student visit (2016) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Practical demonstration and overview of our wheat, OSR and rice GM projects including the implementation and use of new developments such as gene editing in wheat and rice in relevant projects
Year(s) Of Engagement Activity 2016
 
Description University of Cambridge, Dept. of Plant Sciences student visit 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Undergraduate students
Results and Impact Oral presentation with exhibits of some of our wheat and rice GM projects for two groups of undergraduate plant science students from University of Cambridge. The students were able to see all of the tissue culture stages in the wheat transformation process from immature embryo to transgenic wheat plants. The takeall project was presented as an example of a project which uses genetic modification to tackle a disease in wheat for which there is no resistance which can be bred in traditionally. New developments such as CRISPR/Cas9 gene editing were discussed, and the rationale for its implementation in a number of wheat and rice projects. The students were interested and engaged with our team to discuss the technologies, the practical applications and the regulatory landscape. We subsequently received applications for summer placements.
Year(s) Of Engagement Activity 2017
 
Description University of Nottingham MSc student visit in Sept 2019 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact General overview of crop transformation techniques used with a particular focus on specific wheat projects using transformation and gene editing.
Year(s) Of Engagement Activity 2019
 
Description Visit by Centre for Agriculture and Bioscience International - May 2019 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Third sector organisations
Results and Impact Presentation on the crop transformation at NIAB with particular focus on wheat transformation and gene editing projects
Year(s) Of Engagement Activity 2019
 
Description Visit by officials and scientists from India Dept of Biotechnology in April 2019 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Talk on crop transformation activities at NIAB with a particular focus on wheat transformation and gene editing projects
Year(s) Of Engagement Activity 2019
 
Description Visit of Dutch Embassy Agricultural Counsellor and team - July 2022 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Participation in a visit to NIAB Crop Transformation Department, hosted by NIAB CEO Prof. Mario Caccamo, with demonstration and discussion on both GM and gene editing projects and with particular reference to the BBR-funded Community Resource for Wheat and Rice Transformation project.
Year(s) Of Engagement Activity 2022