Broiler gut health and C. jejuni infection: impacts of harvest management

Lead Research Organisation: University of Leicester
Department Name: Genetics

Abstract

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Technical Summary

Life-End technical summary
Preserving bird welfare is a key part of sustainable, safe chicken production. Current intensive production can compromise bird welfare and raises the Campylobacter public health threat; we found strong links between broiler health/welfare and Campylobacter colonisation of chickens. Chicken is the main source of human Campylobacter and this threat must be reduced. There is increasing evidence that edible tissues of chicken, particularly liver, can be Campylobacter-positive. This may be a consequence of bird stress responses and/or colonisation with strains of the bacteria that are inherently better able to leave the gut. Our proposed studies will examine both scenarios and, in novel experiments, we will mimic natural infection and inoculate birds with multiple strains of C. jejuni previously isolated from the chicken gut, carcass surfaces or tissues. These will be characterised using whole genome sequencing and a genome-wide association study to identify genetic elements associated with extra-intestinal spread.
An acutely stressful event in broiler management, in any production stream, is harvest, which we define as comprising four processes: feed withdrawal, catching, transport and stunning. Most UK chickens will be colonised with Campylobacter at harvest and we will study, under controlled commercial conditions, birds colonised with C. jejuni.
We will determine if harvest stresses, individually and collectively, increase extra-intestinal spread of C. jejuni to edible tissues. Our focus is on the gut of the bird and we will examine microbiota, gut epithelial integrity and innate immune responses as well as the in vivo behaviour of the C. jejuni strains. We will use modelling to investigate the relative importance of the underlying biological mechanisms that determine C. jejuni behaviour during the harvesting processes and provide industry with a cost: benefit analysis of different methods of mitigation of the harvest processes.

Planned Impact

Life-End impact summary
Sustainable production of safe chicken is an international priority and preserving/improving bird welfare is a key component of this. Current intensive (broiler) production can compromise bird health and welfare and food safety. Our past work found strong links between broiler health and welfare and the Campylobacter public health threat, a powerful argument for maintenance of high welfare in production. Campylobacter is the most important food borne zoonosis in the UK and the wider EU. In the UK it is estimated that there were ~700000 cases of infection in the UK in 2013 and that chicken-associated Campylobacter infection costs the UK economy ~£1 billion per year. Chicken is overwhelmingly the most important vehicle for human infection and is believed to be responsible for up to 80% of infections. ~80% of chickens on sale in the UK are Campylobacter-positive.
Contaminated chicken presents two health threats. Surface contamination levels can be very high and contamination of deep muscle and liver tissues has been reported in up to 27 and 60% of samples tested respectively. Broiler producers need to improve bird welfare and in so doing lower the public health risk from Campylobacter-contaminated carcasses.
One acutely stressful event in the life of broilers, in any production stream, is harvest which comprises feed withdrawal, catching, transport and stunning. Most birds in the UK will be Campylobacter-positive at depopulation The proposed project seeks to address these issues by undertaking a detailed examination of the interactions between bird gut health and the infection biology of C. jejuni and how these are affected by harvest processes. One key outcome of stress on chickens is that Campylobacter can show extra-intestinal spread and contaminate edible tissues. In addition, levels of the bacterium in the gut increase meaning that carcass contamination may also be higher. It is important to know which of the harvest processes are most important in these respects so that interventions can be better identified.
The work will also determine which is the more important in the spread of C. jejuni from the gut to edible tissues: an apparent enhanced ability to leave the gut as shown by some C. jejuni strains and/or host stress responses. We have evidence to support both. Our past work found that when C. jeuni was cultured in the presence of noradrenaline (NA) before being given to chickens it showed a high level of extra-intestinal spread being recovered with high frequency from deep liver tissues.
The international broiler chicken industry accepts that changes to harvest processes may be needed but requires research outputs in order to identify the key points where change is needed. It is not possible for the industry to undertake this research on its own. It is important that any change is science-led and that all relevant aspects are considered. For example, the move from electrical to gas stunning on welfare on welfare grounds may have increased the public health threat from chicken meat. Gas stunned animals can have high circulating levels of NA and we hypothesise that this could facilitate the process by which C. jejuni leaves the gut and contaminates tissues.
We seek to lessen the public health and bird health threats associated with harvest regimes. The project is in partnership with the UK poultry industry and we will form a project steering group comprising senior UK academics and, more importantly, people from poultry companies and major UK retailers. When he was in Liverpool the work of the PI (TH) on Campylobacter and chickens was co-funded by all major UK retailers. The regular update meetings with these organisations will continue. Through this and the project steering group, the beneficial impacts of our work can quickly be transferred to stakeholders, both those with direct involvement in this work and in the wider community.
 
Description Perturbations to the gastrointestinal microbiota can occur through a number of mechanisms including changes in diet, response to environmental change and stress. When exogenous forces impact on the host resulting in physiological stress that leads to a hormonal response, then this has the potential to upset the gastrointestinal homeostatic function. Any hormonal response may impact the composition and abundance of gastrointestinal bacteria resulting in dysbiosis which may allow a bacterium with pathogenic potential an ecological opportunity to outcompete other bacteria or colonise the gastrointestinal tract. In this investigation stress induction in chickens as part of poultry flock processes was used to determine if disruption of the gut microbiota occurred and if such dysbiosis affected colonisation by Campylobacter jejuni. Using a model system where stress hormone release in chickens is mimicked, we sampled the gut microbiota with and without colonisation by Campylobacter jejuni. Our key finding was that stress induction and not colonisation by Campylobacter jejuni had the greatest impact on the chicken gut microbiota. Once the induction of stress finished the gut microbiota returned to a composition similar, but not identical, to that before treatment. The model system does not enable us to predict the effect of chronic stress on chicken microbiota, but does have implications for constant or frequent high levels of stress.
Exploitation Route The model system does not enable us to predict the effect of chronic stress on chicken microbiota, but does have implications for constant or frequent high levels of stress. This information would be of interest to the poultry industry and those considering policy in the context of poultry health. In the context of chicken colonisation by pathogens, it would be worthwhile to now use the stress-induced dysbiosis to determine if colonisation of other pathogens is modulated.
Sectors Agriculture, Food and Drink

 
Description The outcomes of the programme have been discussed by our co-grant holders with their industry contacts. Investigators from Leicester have reported the key findings as part of three outreach talks to members of the public as an example of the gut-brain axis and how this link between stress and dysbiosis may have implications in poultry production.
First Year Of Impact 2019
Sector Agriculture, Food and Drink,Education
Impact Types Societal

 
Description Masterclass on the microbiome 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact As part of a University offer day event I gave a presentation on the Microbiome. I discussed issues to do with the effect of production techniques and personal dietry behaviour with parents.
Year(s) Of Engagement Activity 2018
 
Description Pint of Science (Leicester) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Approximately 40 members of the general public attended a PhD-student PE activity named the "Pint-of-Science" where general talks are given in pubs. My presentation on the microbiome generated many questions and a discussion on maintaining a healthy microbiota.
Year(s) Of Engagement Activity 2019