Non-invasive laminar electrophysiology in humans

Lead Research Organisation: University College London
Department Name: Institute of Neurology

Abstract

Through experience we learn what to expect from the world around us. We become familiar with particular sensory information and we use this previous experience to make predictions about what we expect to see or touch. When the sensory information is not as we expected, this information (or prediction error) is fed forward to correct future predictions. For example it may be that you have had the impression that your stationary train is leaving the station simply because another train moves alongside you. This is an example of visual information making a prediction about the state of the world- which in this case happens to be a prediction error. We know from the anatomy of the cortex that the pathways that carry this feedback (predictions) and feedforward (prediction errors) information intertwine in parallel streams which interconnect brain regions that process very low level sensory information through multiple intermediate levels right up to those brain regions in which we make decisions about what to do. Interestingly, these pathways have distinct origins with feedforward and feedback pathways originating in the upper and lower cortical layers respectively (separated by around 3-4mm). Besides being distinguishable anatomically, these feedback and feedforward streams operate within distinct frequency ranges, the feedback signals changing more slowly (about 10-20 times a second) than the feedforward (about 30-60 times a second). At present the only way that we can look at these feedforward and feedback signals as they pass through the brain is through implanting micro-electrode arrays in the brains of animals. This is because the majority of human brain scanners either can see the layers but can only watch how they change over many seconds (functional Magnetic Resonance Imaging); or they distinguish the feedback and feedfoward signals in time but cannot resolve where they are coming from (electroencephalography or EEG). This grant builds on recent technological developments in magnetoencephalography (MEG) in which we measure magnetic fields outside the head produced by electrical currents flowing in the human brain. MEG, like EEG, can distinguish between these feedforward and feedback signals in time and frequency; importantly we have recently shown that it is also possible to distinguish between cortical layers using MEG. This is made possible because we have very precise models of where the different cortical layers lie with respect to our magnetic field measuring system (MEG). In this grant we put these two things together and expect to show that we can non-invasively disentangle feedback from feedforward information in both frequency (feedback low frequency, feedforward high frequency) and space (feedforward and feedback origins in upper and lower cortical layers respectively). This is a completely safe and non-invasive technique we can use in humans. Importantly, it will allow us to study how this feedforward and feedback information propagates across multiple areas of the human brain simultaneously - something that cannot even be done in invasive animal studies.This will not only help us understand how the brain works, but will help us understand what happens when these feedback and feedforward streams become compromised in conditions such as Parkinson's disease of schizophrenia.

Technical Summary

Here we wish to study how prediction and prediction error signals propagate through the cortex. We bring to bear two streams of evidence which show that these signals can be separated both anatomically and temporally. Anatomically we know that feedback (or prediction) and feedforward (or prediction error) signals originate in the infra and supra-granular layers respectively. Temporally, we know that feedforward spectra have predominant power in the gamma band (>30Hz) whereas feedback signals have dynamics constrained to lower (<30Hz) frequency bands. We have now developed recording paradigms and precise spatial models that allow us to test whether activity most likely derives from supra-granular or infra-granular layers using non-invasive MEG recordings. Therefore for the first time we are able to make distinction between feedforward and feedback signals in the human brain both spectrally and anatomically. Using a small set of spatially and temporally distinguishable tactile and visual stimuli, within a paradigm specifically developed to study prediction error, we aim to show that we can partition feedforward and feedback signals to expected and unexpected stimuli in both frequency and space. We then aim to show how these signals can be decoded to directly read-out the stimulus expected in a particular cortical area. As MEG gives us whole-brain recordings this allows us to study feedback and feedfoward signals at multiple levels of the hierarchy simultaneously, potentially extending as far back as the thalamus.

Planned Impact

Who will benefit?
Companies and scientists conducting animal experiments can employ the methods for the replacement, reduction and refinement in animal research and for animal welfare.
Currently, work in animal models provides insights into how treatments (e.g. pharmacological, and non-invasive brain stimulation) for neurological conditions (e.g. stroke, Parkinson's disease, Alzheimer's disease, multiple sclerosis) work at a molecular or cellular level. Work in humans provides insights into the behavioural effects of these treatments. However, there is a gap between mechanistic understanding and behavioural consequences which is proving a barrier to the development of treatments. The methodological platform proposed here will provide the appropriate intermediate level of description with which to bridge this gap.
For example: The imbalance between predictions and prediction error coding in the cortex is thought to underlie a number of clinical conditions such as Parkinson's disease and schizophrenia. This work will allow key mechanistic insights into prediction error coding thus providing novel routes to effective treatments.
Longitudinal studies of mesoscopic intracortical interactions in human patient populations will become tractable, something that would be particularly useful in examining changes in excitatory-inhibitory balance after stroke (a novel therapeutic target in modification of potential for plasticity).
The possibility of reliable non-invasive brain images will at first allow more direct targeting of neurosurgery for epilepsy influencing where electrode grids for direct cortical recording might be placed and eventually possibly eliminate them altogether.
This dataset would be unprecedented internationally and open up a new tier of methodological developments exploiting whole brain human imaging at a laminar level. MEG and EEG scanner manufacturers will benefit from the increased economic value of efficient scanning methods.
If we could begin to understand how feedback and feedforward circuits operate in the human brain, it would have a dramatic impact on computer software and hardware development fostering new generations of computing systems modelled on cortical architecture.
All methodological developments at the WTCN are propagated to the community through the freely available open source software package SPM supported by Barnes and colleagues. The software is GUI based and intended for use by non-mathematical users with clinical or neuroscientific expertise. That is, these users will not need to understand how the algorithms work in order to benefit from the improved estimates of brain activity. Barnes co-organises a regular SPM course for M/EEG. The on-line material for this course (and companion fMRI course) has around 25000 visits annually. In addition there is an active mailing list with over 4000 subscribers. There are also close links with all other U.K. MEG groups and a one day training course attached to the annual conference.
To inform the different user groups and beneficiaries, a public web-site will be set up containing information about the goals of the project and the latest developments. It will also allow the users to contact and interact with the team of investigators. Furthermore, the investigators plan to organize a symposium at Biomag 2016 (our major MEG conference) to further disseminate and exchange ideas. Barnes has organized and presented at such symposia before.
Impact activity deliverables and milestones
Public engagement via web-site (hits; feedback forms)
Release of the software into SPM. Feedback from researchers and user groups.
Successful workshop merging clinical, technological and scientific aspects; and reaching the relevant user groups (attendance rate, questionnaire for attendants).
Future application for technology transfer funding based on project results, for example to develop head-casts in collaboration with MEG system manufacturers.
 
Description We have been using Magnetoencephalography (MEG) which measures magnetic fields generated by active neurons. This means that our images change millisecond by millisecond. Using this technique we have shown differences in the activity patterns within deep vs. superficial cortex ( a distance of around 4-5mm). The basic result is that messages feeding new sensory information forward tend to travel quickly and through the upper-layers; whereas information feeding back (what we expect to do or experience next) seems to travel more slowly and pass predominantly through the deeper cortical layers. Up until now these kinds of research questions have been restricted to recordings in animals using implanted electrode arrays. This work is novel as we have shown that it is possible to observe the same processes non-invasively in humans.
Exploitation Route This means that others can now begin to study how feedforward and feedback information streams give rise to healthy human brain activity. We can view these images millisecond by millisecond and watch the activity as it moves from deep to superficial cortex. Until now such images were only available through invasive recordings in animals; this work can be taken forward to study uniquely human qualities such as how we process language, that would never have been possible before.
Sectors Digital/Communication/Information Technologies (including Software),Education,Healthcare,Pharmaceuticals and Medical Biotechnology

 
Description Bespoke research projects such as the headcasts have allowed industry (specifically Chalk Studios Ltd) to capitalise on a growing need for collaboration opportunities between the medical and technology industries. Since then, Chalk Studios has gone on to work with research facilities around the world, building custom headcasts, helmets for new generation sensors known as optically pumped magnetometers (OPMs) and other such medical devices. It now generates around 40% of its turnover through collaborative projects associated with the medical industry, and hopes to release a new generic OPM helmet later this year, which it hopes will open up the use of OPM to a wider market. Along with Chalk studios, clinical collaborators and artists we are also currently designing a range of medical imaging helmets for children with epilepsy.
First Year Of Impact 2014
Sector Digital/Communication/Information Technologies (including Software),Education,Healthcare,Manufacturing, including Industrial Biotechology
Impact Types Cultural

 
Description The head-casts that have come from this award have influenced the way MEG data is recorded in many other labs
Geographic Reach Multiple continents/international 
Policy Influence Type Influenced training of practitioners or researchers
Impact The use of head-casts to collect non-invasive MEG data on humans has allowed researchers to ask questions that could previously only be addressed using invasive animal research.
 
Description Wellcome Collaborative Award
Amount £1,600,000 (GBP)
Funding ID 203257/Z/16/Z 
Organisation Wellcome Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 04/2017 
End 03/2022
 
Title anatomical surface model comparison 
Description We use different anatomical models to describe either the supragranular or infragranular layers of the cortex and then use each to model different frequency components of the MEG data. This allows us to estimate in which cortical layers these different frequency components originate completely non invasively in the human. The success of these models depends on the development of new recording technology based on head-casts which we have shared with a number of groups around Europe. 
Type Of Material Model of mechanisms or symptoms - human 
Year Produced 2015 
Provided To Others? Yes  
Impact We have just submitted a publication detailing this new method and once published, we expect that this will be useful tool for a number of international groups to use. The fact that we can assess these laminar dynamics in such detail using MEG is beneficial in that it may be able to replace some of the invasive animal work. The submitted publication details how our data matches well with what has been seen previously in invasive animal work and therefore acts as a validation for using this technique to replace some invasive animal studies. 
 
Title data recording protocols and documentation for headcasts 
Description A manuscript describing the technique https://www.ncbi.nlm.nih.gov/pubmed/27887969. A detailed safety briefing and set of protocols for recording head-cast based MEG data. 
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
Impact A number of other labs have now begun to use this technology. 
URL http://megcommunity.org/instrumentation/peripherals/20-peripheralscategory/31-miscellaneous
 
Description Columbia 
Organisation University of Antioquia
Country Colombia 
Sector Academic/University 
PI Contribution We have worked with a team of engineers from Columbia to improve our estimates of human brain activity.
Collaborator Contribution Our partners have developed new algorithms and optimization strategies that can be directly applied to our brain imaging data.
Impact We have published 1 peer reviewed article together and have another under review. This is multidisciplinary: engineering/ physics/neuroscience. The Columbian team was successful in securing funding locally based on this collaboration.
Start Year 2016
 
Description Zurich 
Organisation ETH Zurich
Country Switzerland 
Sector Academic/University 
PI Contribution We have provided data from this grant so that the Zurich team can build and test new spatial and temporal models of brain function.
Collaborator Contribution The Zurich team are providing the temporal modelling expertise and analyzing these data.
Impact https://www.biorxiv.org/content/10.1101/2020.07.20.208504v1
Start Year 2015
 
Description auditory 
Organisation University College London
Department Ear Institute
Country United Kingdom 
Sector Academic/University 
PI Contribution We are working with a team interested in auditory neuroscience and the involvement of the hippocampus in the processing of predictable sound sequences. We are providing the analysis expertise and the head-cast technology to improve the source reconstruction accuracy and sensitivity.
Collaborator Contribution Our partners are providing the neuro-scientific foundation of the research, the hypotheses and the stimuli.
Impact No outcome yet. This is a multi-disciplinary project across neuroscience/ physics and engineering.
Start Year 2016
 
Description cellular 
Organisation University of York
Country United Kingdom 
Sector Academic/University 
PI Contribution We provided expertise in human imaging of cortical layers. This work builds on work done by our collaborators who work on slices preparations of cortex in vitro.
Collaborator Contribution We are now completing a paper that links the microscopic networks measured in-vitro to our non-invasive measures in humans.
Impact We have a paper in preparation linking in-vitro and non-invasive human data. This is multidisciplinary - biology, physiology, neuroscience, physics, engineering.
Start Year 2016
 
Description cerebellum 
Organisation University of Birmingham
Country United Kingdom 
Sector Academic/University 
PI Contribution This collaboration led to research into the human cerebellum which has hardly been studied with non-invasive imaging before. We provided the imaging expertise.
Collaborator Contribution The partners provided the physiological and neuroscience expertise.
Impact Our partner is now applying for funding to get this project off the ground.
Start Year 2017
 
Title Sparse Empirical Bayes Beamformer for SPM 
Description Prof Gareth Barnes has implemented a new sparse empirical bayes beamformer as part of the open source SPM software. 
Type Of Technology Software 
Year Produced 2015 
Open Source License? Yes  
Impact This adds to the repertoire of source reconstruction methods available for MEG. The main innovation here is that rather than describe the activity at each patch of cortex (>8000) we try to make an empirical estimate of the 20 most likely focal sources underlying the MEG data. 
URL http://www.fil.ion.ucl.ac.uk/spm/software/spm12/
 
Description Science of the Mind conference for Schools 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact Dr Rossiter organised a one day Neuroscience event for 120 school pupils aged 14-16 years old. There were 2 keynote lectures by neuroscientists from UCL and 6 workshops on different neuroscience topics that got the pupils to engage in current research ongoing at UCL and ask questions/discuss relevant issues. As this was such a success, the event was then repeated down near Bournemouth for another set of schoolchildren.
Year(s) Of Engagement Activity 2015
 
Description Software/ Methods workshop 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact We run two courses per year to teach brain imaging methods and the use of the software developed and supported by our centre (SPM, statistical parametric mapping). This is the most widely used brain imaging package worldwide.
We have now added lectures and workshops to support the new Optically Pumped Magnetometer (OPM) technology and the OPM-specific software with SPM.
Year(s) Of Engagement Activity 2021,2022
URL https://www.fil.ion.ucl.ac.uk/spm/course/
 
Description school visit 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Took part in a school open day where we talked about our work and toured the building with A- level students
Year(s) Of Engagement Activity 2017