14-ATC2. Engineering resistance to disease in pigs

Lead Research Organisation: University of Cambridge
Department Name: Veterinary Medicine

Abstract

Abstracts are not currently available in GtR for all funded research. This is normally because the abstract was not required at the time of proposal submission, but may be because it included sensitive information such as personal details.

Technical Summary

This project addresses food security and environmental sustainability by increasing production efficiency by reducing wastage due to disease and thus decreasing the carbon footprint of pork production. We will target the significant impact of influenza virus on one of our core livestock industries. Swine influenza (SIV) ranks consistently among the top 3 economic diseases affecting breeding, nursery, and finishing herds. In addition, influenza is the top zoonotic viral disease of swine. Our strategy is based on the recent validation of a novel RNA decoy approach in chickens. We now aim to use this newly developed technology to produce genetically engineered (GE) pigs expressing novel RNA molecules designed to prevent replication and propagation of SIV. We aim to mitigate or even eliminate mortality and morbidity due to SIV infection in pigs, while additionally protecting human health by reducing the zoonotic flu pandemic potential. It is the intention that this project will function as a 'prototype' study and, if successful, with further method refinement lead to development of a commercial product.

Planned Impact

Who will benefit from this research?

The non-academic beneficiaries of this research include pig breeding companies, pig producers and ultimately the entire chain of users of pig products, including meat packers, processors, retailers and consumers. There are also benefits to the animal biotechnology sector.


How will they benefit from this research?

Influenza is a high profile zoonotic disease of man, livestock and wild animals. Vaccines are limited to virus strains and cannot be applied to wild animal populations. Single pandemics caused by the virus can be associated with huge numbers of human deaths in addition to vast hospital care costs. Thus, the development of novel and/or more effective strategies to control influenza are needed to limit the annual and pandemic associated human death rates, reduce burden on the health industry, while improving the sustainability of the pig industry and potentially reduce the cost of pig products.

In the pig breeding sector the research outputs will have the potential to inform future breeding programmes. The pig breeding industry has already incorporated selection for desirable disease resistance genes into breeding programmes. To date selection for disease resistance has been limited to diseases for which susceptibility is determined by a single major gene. Moreover, breeding for disease resistance is constrained by the nature of any genetic variation in susceptibility to infection. Whilst evidence for genetic variation in host responses to infection with influenza exists, the genetic control of these responses is polygenic and there is no evidence to date of major genes conferring complete resistance to influenza. With increasing capabilities to genetically modify farmed animals there are opportunities to engineer resistance. It is now timely to explore the opportunities for engineering pigs for enhanced resilience infection. The interaction between host (pig) and pathogen (influenza) are now better understood and new genome editing technologies facilitate the necessary engineering.

Public acceptance of genetically modified animals remains uncertain, especially in Europe. However, the development of non-transgenic pigs engineered for enhanced disease resistance using genome editing technology, which introduces no exogenous DNA, has the potential to re-shape the debate. Moreover, given the impact of influenza in farm animals and man, beneficial impacts could be delivered to the pig industry within 3-5 years of project completion.

Publications

10 25 50
 
Description We have identified a way to express inhibitory RNAs in swine cells that avoid activating the innate immune response of transgenic pigs. Transgenic pigs were generated using this system and tested to determine whether infected transgenic pigs had reduced capacity for transmitting the virus onto contact non-transgenic pigs. The "RNA decoy" transgene used did not significantly change the susceptibility to infection or influence the transmission dynamics.
Exploitation Route Expression of short hairpin RNAs that do not activate RIG-I signalling pathways. Production of disease resistant pigs.
Sectors Agriculture, Food and Drink

 
Description Studentship funding
Amount £36,000 (GBP)
Organisation Genus plc 
Sector Private
Country United Kingdom
Start 10/2014 
End 10/2016
 
Title Method for expressing short interfering RNAs in vivo without activating RIG-I innate immune response 
Description A method for expressing short structured RNAs that are then processed by endogenous enzymes to remove immunostimulatory 5'PPP moiety. 
Type Of Material Technology assay or reagent 
Provided To Others? No  
Impact Allows constitutive expression of silencing/decoy RNAs in species with a functional RIG-I pathway. 
 
Title Transgenic pigs carrying inhibitory transgene targeting influenza virus 
Description Lentiviral vetor system used to deliver short hairpin RNA genes into pig genome with the intention of suppressing influenza virus replication. 
Type Of Material Biological samples 
Provided To Others? No  
Impact No impact yet. Pigs are being bred to permit in vivo challenge experiments to test efficacy. 
 
Description BW 
Organisation University of Edinburgh
Department The Roslin Institute
Country United Kingdom 
Sector Academic/University 
PI Contribution Conception design and construction of transgenes intended to suppress influenza virus replication in pigs
Collaborator Contribution Gene editing and TALEN-based technology for introducing transgenes into swine germ line.
Impact Research funding from the TSB Catalyst scheme
Start Year 2013
 
Description Genus 
Organisation Genus plc
Country United Kingdom 
Sector Private 
PI Contribution Design of porcine ribozyme elements for processing short hairpin inhibitory RNA molecules. Provision of lentiviral vectors caring influenza virus inhibitory transgenes. Construction of shRNA expression system that does not stimulate RIG-I signalling pathway in porcine cells (ongoing project)
Collaborator Contribution 6 months financial support for postdoctoral researcher. University fees for a Ph.D student.
Impact None yet
Start Year 2011
 
Description Pig breeding with Genus 
Organisation Genus plc
Country United Kingdom 
Sector Private 
PI Contribution Developed and demonstrated gene editing in pig zygotes.
Collaborator Contribution Supply of animal resources and funds.
Impact Several publications, presentations at scientific meetings, media opportunities and joint research grants.
Start Year 2010
 
Description Cutting edge Festival 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Talk on genome edited livestock at international science festival
Year(s) Of Engagement Activity 2016
 
Description DBT workshop 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Indian Department of Biotechnology workshop on GM Livestock in Bangalore
Year(s) Of Engagement Activity 2016
 
Description Hendrix Genetcic workshop 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Industry/Business
Results and Impact Closed industry workshop on application of genetic engineering technology
Year(s) Of Engagement Activity 2016
 
Description Interview by National Geographic journalist 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Telephone interview and subsequent written correspondence and provision of materials. Journalist writes for "The Plate" articles in National Geographic. Provided a balanced but generally pro-GM report on the potential of transgenic disease resistant animals.
Year(s) Of Engagement Activity 2015
URL http://theplate.nationalgeographic.com/2015/08/05/want-a-bird-flu-free-world-consider-breeding-resis...
 
Description Interview for the magazine Science & Vie (Science & Life, the n°1 science magazine in France) 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact Interview for an article on genetically modified farm animals resistant to infectious diseases.
Year(s) Of Engagement Activity 2017
 
Description Interview on genetically modified animals for national magazine Science & Vie (Science & Life, the n°1 science magazine in France) 
Form Of Engagement Activity A magazine, newsletter or online publication
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact 30 minute interview with a journalist regarding the use of genetic modification to improve the health of livestock animals. This provided information that contributed to an article in Science & Vie, a high profile science magazine in France, a country with a notoriously strong mistrust of genetic modification. The article was reasonably balanced and fair.
Year(s) Of Engagement Activity 2017
URL https://www.science-et-vie.com/corps-et-sante/animaux-genetiquement-modifies-bientot-dans-nos-assiet...
 
Description Midlorthian Science Festival Debate 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? Yes
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Constructive and lengthy debate

Invited back to next festival
Year(s) Of Engagement Activity 2014
 
Description Nuffield Council bioethics workshop 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Workshop exploring bioethics of genome editing technology and applications
Year(s) Of Engagement Activity 2015,2016
 
Description Our Changing World Series 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact University of Edinburgh showcase lecture on genome editing animals for food security
Year(s) Of Engagement Activity 2016
 
Description RSB Teachers Annual Meeting 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact Talk on genome editing to teachers conference
Year(s) Of Engagement Activity 2016
 
Description SUSS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact Talk on impact of genome editing technology on society at annual Scottish universities science school.
Year(s) Of Engagement Activity 2018
 
Description The Food Chain 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact BBC World Service radio interview on genetically engineered livestock for The Food Chain
Year(s) Of Engagement Activity 2018
 
Description named biotechnology speaker on US Ste |Department Economic Bureau Outreach Fund 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact International workshop top engage stakeholders in genetic engineering technology and applications
Year(s) Of Engagement Activity 2015