TuberZone: Development of an innovative spatial crop model and decision support system for improved potato agronomy

Lead Research Organisation: Newcastle University
Department Name: Sch of Natural & Environmental Sciences

Abstract

Agriculture is now a data-rich environment. A multitude of proximal & remote sensors capture many different aspects of agriculture production systems, particularly cropping systems. Nowadays, growers are able to record & change the rates of most agronomic inputs or operations. However, growers rarely use the capabilities at their disposal because they are unable to translate the available data streams into information & then into good agronomic decisions. Incorrect analysis generates incorrect decisions. Because of this, growers are wary to adopt decisions based on information that they do not understand well.

One clear, potentially very important way in which these spatial data can be used is within crop models. Crop models are invaluable to the agricultural community to predict how crops develop under different scenarios (alternative management and/or evolving in-season climate variations). While many well developed & well credential crop models exist, these are built on an assumption of modelling a point, which is an average response for a field or farm. They are not designed for high-resolution spatial modelling & usually collapse when used as such.

The objective for this project is to integrate a point crop model with spatial data to generate an effective spatial crop model for potato production. This will have an emphasis on predicting tuber size distribution (TSD) & managing the various drivers (environmental & managerial) of TSD. By empowering an existing crop model with spatial information, it is possible to remove the grower/agronomist directly from the data analysis & the decision-making. Expert knowledge will be captured within the crop model, but there is no direct involvement between the spatial data & the end-users, removing this source of error and confusion. The spatial crop model is therefore a method for spatial data-fusion & value-adds to the original spatial data. The model provides a relatively simple integrated spatial output (recommended variable-rate management operations) that the grower can access for adoption. The modelling also allows estimates of uncertainty (as well as an operation) to assist growers in risk assessment with differential management. From an academic perspective, a few issues need to be researched & developed to achieve this. These include;
1) Filling the knowledge gap on the amount (magnitude & spatial structure) of crop variability in potato fields. There are very few spatial studies available & this information is needed to correctly parameterise any spatial model within sensible boundary limits.
2) Understanding the drivers of the observed variation in crop production. The variability observed can be linked to spatial information on soil & weather variations, as well as management decisions. This helps to inform the spatial model of the yield determinant factors.
3) Development of a spatial meta-model. The spatial crop model relies on the output from an existing point crop model being used as an input into a spatial meta-model. The spatial meta-model is a new concept. It requires standardisation of inputs, particularly in regards their spatial footprint, correct parameterisation of neighbourhood interactions & correct modelling of the uncertainty at each point in the spatial model. Correct data processing & the knowledge from Points 1) & 2) above will ensure that the meta-model is correctly designed & populated. It will be validated against field experiments in the latter stages of the project.

The project brings together leading UK industry expertise in potato production (SAC, SRUC, McCains), supply chains & processing (McCains), machinery for potato production (Grimme) & precision agricultural services (SE), as well as leading academic researchers in the area of precision agriculture (Newcastle Uni) & crop modelling (Newcastle Uni, Mylnefield Research Services). This consortium is well placed to deliver the project & deliver it to the needs of the industry.

Technical Summary

Please see information in summary section.

Planned Impact

THE COMMERCIAL PROJECT PARTNERS: The outcome from the project is to achieve a more efficient production system for potato with a more uniform quality of production.
SoilEssentials (SE) will benefit from increased business & company expansion into agronomic service (information) provision. This expands on & grows their core business model of hardware & data sales.
McCains (MC) will benefit from an increase in the potato quality supplied to their processing plants. This reduces waste & optimises return per ton of potato for McCains.
Grimme (GR) is a major potato hardware manufacturer. Increased use of agri-technologies in potato provides a new market opportunity for them to expand their engineering & hardware business. This is conditional on growers being able to make good decisions, which a successful project will achieve.

AGRONOMISTS (AG) Industry agronomists will benefit from being able to provide better service & a point of difference to other companies

ACADEMIC PARTNERS: This marriage of spatial modelling & soft-computing processes with an existing crop model has the potential to add considerable power & flexibility to the original point-based crop model. This is the first proposal of this kind that we are aware of & will significantly enhance the reputation of Newcastle Uni in this area.

POTATO PRODUCERS: Extension of the spatial crop model into spatial decision support systems, & service delivery by SE & AG, will have a major impact on potato growers. It will provide timely, & spatially-explicit information on their production system to allow them to react spatially to the evolving growing season. This will change management radically from a whole-field perspective to a site- or zone-specific in-field perspective.

POTATO INDUSTRY SUPPLY CHAIN: Improved modelling & improved quality on-farm will have flow on effects to the supply-chain. Growers will have a better estimation of their total crop (including quality), which will aid in the logistics of harvest, transport, processing & marketing of the crop. Processers & end-users of potato products will be able to budget with more certainty on production levels.

AGRONOMIC CROP MODELLERS: The conceptual spatial meta-model will be developed in a potato system; however, there is no restriction on the type of system that this could be applied to. The only limitations are the availability of relevant spatial information layers & existing knowledge of the expected variance in crop production & the drivers of this variance. In many systems, particularly cereal systems, the base knowledge & spatial data sets are well understood & this spatial meta-model should be easily adapted to a variety of existing cereal crop models.

ARABLE & HORTICULTURAL SECTOR: Adaption & deployment of the spatial meta-model to other crop models will see a shift from single input crop models to multi-input models & more integrated decision support systems in various cropping systems. This will drive production efficiencies in almost all major arable/horticultural systems. Where the spatial knowledge of crop variability & the drivers of variability are missing, the potential of these crop models will drive the generation of this knowledge. A better understanding of spatial & temporal variation in a production system will have benefits with & without the modelling. Crop models are particularly important in high value specialty crops, where quality premiums, rather than quantity, are key determinants of profitability.

ENVIRONMENTAL BENEFITS: Improved production efficiencies, by differential management based on correct spatial modelling, will drive a reduction in non-point pollution from these production systems. Targeting the right amount of input & the right timing of application maximises the use of the input by the crop & minimises losses. This will have multiple environmental benefits, from reduced volatilisation of GHGs to less leachate in ground & surface waters.

Publications

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Chen H (2017) Conceptual Spatial Crop Models for Potato Production in Advances in Animal Biosciences

 
Description Spatial variation in potato production is linked tot he type of production. The opportunity for ware production lies in manageing tuber size while in seed systems i lies in better managing total yield. UAV imagery is a suitable surrogate for canopy development and when spatial canopy informationis incorporated into the model,model predictions are improved.
Exploitation Route To be completed at completion of project
Sectors Agriculture, Food and Drink

 
Description The findings from the study have been used to update and refine an existing potatocrop model. This has been incoroporated into a commercial service by the lead industry partner as a beta service for farm clients.
First Year Of Impact 2017
Sector Agriculture, Food and Drink
Impact Types Economic

 
Title Spatial Potato Crop Attributes 
Description A database of 13 fields (8 in 205 and 5 in 2016) with 100 sites per field where data about yield, tuber size distribution and shape and plant and stem numbers were collected mid-season and at harvest. Sites were selected based on a stratified random sampling scheme from existing soil ECa maps. All sites are georeferenced to permit spatial analysis of the data 
Type Of Material Database/Collection of data 
Provided To Others? No  
Impact The first large scale spatial data set derived from commercial potato fields to quantify the amount of spatial variation in potato production. This has allowed us to quantify the opportunity for spatial managemnt of potato tubers. 
 
Title Spatialised Potato Crop Model 
Description We have altered an existing strategic deterministic potato crop model into a tactical crop model that is able to take real (or near-real time) spatial data on crop and soil attributes and update the model within the season at a sub-field spatial scale. This means that the model can now be applied to in-season management applications as well as long-term modelling applications (climate change scenarios etc...) 
Type Of Material Computer model/algorithm 
Year Produced 2017 
Provided To Others? No  
Impact Model is being incoroporated into a commercial tool for application as a service for the UK potato industry 
 
Title MAPP model for cloud-based applications 
Description A desktop version of a potato managment tool has been updated to C# language to permit it to run in a cloud environment. The tuber size distribution model on the software has also been apdated to a more effective model. 
Type Of Technology Software 
Year Produced 2016 
Impact Is the basis of a new service for potato agronomy being developed by the industry partners in the project. 
 
Description A UAV information day for agricultural in Norhtern England 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Industry/Business
Results and Impact A one day event at Cockle Park farm to poromote applicaitions of UAV technology in agriculture localy. Highlight hardware and softewaare applications for agricultural applications.
Year(s) Of Engagement Activity 2017
 
Description Farmer-Scientist forum at Yorkshire Agriculture Show 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact A short (20 min) presentation and a general debate on the application of UAV/Drone technology in agriculture at the Great Yorkshire Show.
Year(s) Of Engagement Activity 2017
 
Description Hosted visit from BBSRC Research Mangers involved inAgri-tech 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Policymakers/politicians
Results and Impact Two senior research managers in BBSRC visited NU-Farms to see the integration in Agri-tech projects at Newcastle between the Agriculture and Engineering and Social Sciences and discuss options for a generalPrecisionAgriculture callwithin BBSRC
Year(s) Of Engagement Activity 2017
 
Description Invited Talk to Symposium on Precision Agriculture in Australia 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact An invited talk on Precision Agriclulture activites and structures in the UK and Europe. Part of a a 2-daysymposium on Precision Agriculutre in Australia/New Zealand. In particularly how funding was set up in the UK to suport ODA and also Industry-led activites and the opportunities this entailed.
Year(s) Of Engagement Activity 2017
 
Description Invited presentation to a research group in France 9UMR ITAP, Montpellier) 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact I was invited to attend a meeting of the Mixed Research Unit in Information Technologies in Agri-Proces 9UMR ITAP) in France to discuss the role of spatial decision making in agricultural systems
Year(s) Of Engagement Activity 2017
 
Description Newcastle stand at Great Yorkshire Show 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Assited with Newcastle Agriculture stand at Great Yorkshire show to explain research acitivities in agriculture within the University
Year(s) Of Engagement Activity 2017
 
Description Northumberland County Show - Newcastle Stand 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Assited with Newcastle Agriculture stand at Northumberland show to explain research acitivities in agriculture within the University
Year(s) Of Engagement Activity 2017
 
Description Presntation tot he Royal Statistical Society - Statistics and Agriculture Meeting 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact The RSS held a meeting directed at Statistics in Agriculutre (at Reading University) and invited me down to present based on my research interests int he area.
Year(s) Of Engagement Activity 2017
 
Description SARIC Club Panel Member 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact Academic Panel member of BBSRC/NERC SARIC Club. Steering committee for program and assessemnt of proposals and sandpit activities
Year(s) Of Engagement Activity 2014,2017,2018
 
Description Visit of Agri-tech Facilities at NU-Farms by Kirkly Hall Agriculutre College 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Professional Practitioners
Results and Impact Kirkley Hall is an agriculture College in Northumberland. They are interested in including Agri-Tech into their courriculm and using the facilities at coockle Park in a teaching and reserch aspect. This was a meeting to showcase the range of facilities at Cockle Park.
Year(s) Of Engagement Activity 2017