Dry Active Matter on a Sphere

Lead Research Organisation: University of Dundee
Department Name: Physics

Abstract

When flocks of birds migrate southwards imagine larger and larger swarms moving
together on a shrinking globe, until one gigantic flock covers the entire planet.
What becomes of their motion if they reach the pole? We propose to build and analyse
a model of active particles confined to move on the surface of a sphere. Unlike in the
plane where all particles can align with each and travel with the same velocity parallel
to each other, motion on the sphere is far more peculiar. This is a direct consequence
of the famous Hairy ball theorem that states that "you can't comb a hairy ball flat without
creating a cowlick". Translated into the language of active motion, it is not possible for the
entire flock to travel with a uniform velocity on the surface of a sphere. As a result, one expects
to observe a rich and complex set of motion patterns emerging from the intricate interplay
between the curvature and particles' alignment. It is our aim to identify, understand and classify
those motion patterns.

Planned Impact

This project aims to use numerical simulations to study a model of self-propelled particles confined to move on the
surface of a sphere. As such, its direct and immediate impact will be most apparent in
the vibrant and rapidly growing physics community interested in understanding
behaviour of systems far from equilibrium. While there have been many recent advances in the field of active matter
research, there are still numerous fundamental questions that remain
open. To the best of our knowledge, to date there have been no attempts
to systematically study effects of curvature on the emergent collective
behaviour in active systems. This project strives to open a new direction of active matter
research, which would place an emphasis on a systematic study of
the effects of curvature on formation and evolution of dynamic patterns,
in hope to inspire new experimental and theoretical work into this
unexplored venue of the out-of-equilibrium physics.

In the UK, there are many research groups working on active systems.
Most notably, groups at University of Aberdeen (S. Henkes, F. Ginelli),
University of Bristol (T.B. Liverpool), Cambridge University (R. Goldstein),
Durham University (S. Fielding), University of Edinburgh (M. E. Cates, D. Marenduzzo, W. Poon) and
Oxford University (R. Golestanian, J. Yeomans). Internationally, the Syracuse Soft Condensed
Matter group has a long tradition in exploring effects of geometry
on various physical systems (Bowick, Marchetti). Experimental groups
at the University of Massachusetts - Amherst (Menon), at the University
of Chicago (Irvine) and at the New York University (Chaikin), to name
a few, have been performing intriguing experiments in passive systems
in curved geometries, while the group of Zvonimir Dogic at Brendeis
University (USA) has recently performed seminal experiments with active
nematics on the surface of a bubble, albeit effects of curvature have
not been addressed. All those groups could directly benefit from the results of this study.

In a broader sense, developing an understanding of how curvature affects
activity and out-of-equilibrium behaviour in general can have far
reaching impact on other fields of research, primarily in life sciences.
A living organism is probably the most common yet exceedingly complex
example of a system out of equilibrium. Complexity of life stems from
an intricate dynamic interplay of many individual components spanning
multiple length and time scales. It is an emergent phenomenon that
cannot be fully understood by studying individual components on their
own. This project hopes to point out importance
of geometry on systems far from equilibrium. Such effects might play
a crucial role in many aspects of life. For example, it is well known
that during the early development, cells in an embryo undergo large
structural and spacial changes. Embryos are almost never flat, but
rather have distinctly curved geometries and often undergo non-trivial
topological changes. It is very plausible to expect that the geometry plays an important
role in how cells move and organize.

Publications

10 25 50

publication icon
Russell ER (2017) Stiffening thermal membranes by cutting. in Physical review. E

publication icon
Sknepnek R (2015) Active swarms on a sphere. in Physical review. E, Statistical, nonlinear, and soft matter physics

publication icon
Wan D (2015) Effects of scars on icosahedral crystalline shell stability under external pressure. in Physical review. E, Statistical, nonlinear, and soft matter physics

 
Title bubble, bulge, bleb exhibition 
Description As part of a year-long programme celebrating the centenary of D'Arcy Thompson's book "On Growth and Form (1917)" LifeSpace (a science research art gallery within School of Life Sciences at the University of Dundee) presented an exhibition of spirals, spheres and waves in art inspired by naturally occurring mathematical forms and computer-generated abstractions. Drawn from the University of Dundee's collections, the exhibition features mathematical models of complex biological systems from scientists at the University of Dundee including physicist Rastko Sknepnek alongside work by artists Mat Fleming, Andy Lomas, Wilhelmina Barns-Graham, Daniel Brown, Victor Pasmore and graduates from Duncan of Jordanstone College of Art & Design (University of Dundee). 
Type Of Art Artistic/Creative Exhibition 
Year Produced 2017 
Impact A local art exhibition in a space that combines works of artists and scientists. The event was popular with the local Dundee community. 
URL http://lifespace.dundee.ac.uk/exhibition/bubble-bulge-bleb
 
Description We identified key physical processes that govern the motion of active matter system in curved geometries. This allowed us to identify collective motion patterns that are unique to the curved geometry and have no analogues in flat spaces (e.g., on a plane). We extended the model to include actively propelled filaments and identified a variety of collective motion patterns, including a phase where the activity of the system is trapped in local swirling motion. This is an important result as it shows that the system can expel the activity in part by changing conformation of the agents.

In addition, some of the findings of this project could be of importance to developmental biology, which provides a natural example curved active matter - during the embryonic development cells actively grow, divide and migrate, and all this happens in an embryo that is inherently curved.
Exploitation Route Our 2015 paper published in Physical Review E has been a seminal work that initiated research of active matter on curved surfaces. Over past 2 years, several other groups have followed up on this research.
Sectors Digital/Communication/Information Technologies (including Software)

 
Title SAMoS - Soft Active Matter on Surfaces 
Description Soft Active Matter on Surfaces (SAMoS) is a set of software tools designed and developed with the specific aim of enabling versatile numerical simulations of active matter systems confined to move on curved surfaces. The package comes with the set of tool that enable user of rapid setup and execution of simulations as well as for detailed data analysis and visualisation. 
Type Of Technology Software 
Year Produced 2017 
Open Source License? Yes  
Impact This software package allows simple and easy setup and execution of a wide range of numerical simulations of active matter systems. 
URL https://github.com/sknepneklab/SAMoS