Parahydrogen-Induced Hyperpolarisation For Microfluidic Perfusion Culture
Lead Research Organisation:
University of Southampton
Department Name: Sch of Chemistry
Abstract
Nuclear magnetic resonance (NMR) is one of the most powerful tools for
investigating the structure, composition, and dynamics of living and non-living
matter. Its sensitivity is limited by the degree of alignment of nuclear spins,
which is small even in the strongest magnets. Hyperpolarisation techniques
such as parahydrogen-induced polarisation can produce much better spin
alignments, offering corresponding increases in sensitivity.
paraQchip aims provide lab-on-a-chip (LoC) cultures of cells with hyperpolarised
metabolites (pyruvate, fumarate) for high-sensitivity NMR monitoring of metabolism,
by integrating all steps of parahydrogen-induced polarisation (PHIP) onto the
chip. To this end, we propose an interdisciplinary research programme that uses
quantitative modelling of spin dynamics, transport, and kinetic processes
in tandem with experimental quantification of reaction and transport kinetics to
inform the design of the microfluidic chip layout, NMR detector, radiofrequency
pulse sequences, and operation parameters such as flow rates, reagent concentrations,
solvents, and temperature. The main challenge lies in the concerted operation
of the hydrogenation, polarisation transfer, and purification steps, which
must all be completed before nuclear relaxation destroys the hyperpolarisation.
The proposed research consists of four work packages, each led by one
of the Co-PIs. WP 1 (Kuprov) focusses on modelling, using a novel approach
that treats spin and spatial degrees of freedom on an equal footing.
WP 2 (Levitt) deals with the required transfer of polarisation from the
parahydrogen spin order to the target metabolite. This requires design
of a novel microfluidic NMR probe system with separate detectors for
the transfer step and for downstream observation. WP 3 (Whitby) will focus
on the chemical aspects, including hydrogenation, cleavage, and purification.
Finally, WP 4 (Utz) deals with the microfluidic integration of these steps.
LoC devices provide detailed control over the growth conditions of cells,
tissues ("organ-on-a-chip"), and small organisms, providing valuable models
supporting the development of diagnostics and therapies, and drug safety
testing. NMR spectroscopy could be of great use in this context, as it allows
non-invasive quantification of metabolic processes. However, the limited
sensitivity of conventional NMR is exacerbated at the microlitre volume
scale of LoC devices. paraQchip will address that, pushing the limit
of detection from the millimolar concentration range down to micromolar. This will
allow detailed in-situ observation of metabolic processes in microfluidic
cell cultures as well as tissue and organ models, with many applications
in disease modelling, drug testing, and other aspects of the life sciences.
Microfluidic implementation of PHIP will also lead to deeper understanding
of the interplay between the hydrogenation reaction mechanism and nuclear
spin relaxation processes. The computational tools developed and validated
through paraQchip will benefit the development of hyperpolarised magnetic
resonance imaging techniques.
investigating the structure, composition, and dynamics of living and non-living
matter. Its sensitivity is limited by the degree of alignment of nuclear spins,
which is small even in the strongest magnets. Hyperpolarisation techniques
such as parahydrogen-induced polarisation can produce much better spin
alignments, offering corresponding increases in sensitivity.
paraQchip aims provide lab-on-a-chip (LoC) cultures of cells with hyperpolarised
metabolites (pyruvate, fumarate) for high-sensitivity NMR monitoring of metabolism,
by integrating all steps of parahydrogen-induced polarisation (PHIP) onto the
chip. To this end, we propose an interdisciplinary research programme that uses
quantitative modelling of spin dynamics, transport, and kinetic processes
in tandem with experimental quantification of reaction and transport kinetics to
inform the design of the microfluidic chip layout, NMR detector, radiofrequency
pulse sequences, and operation parameters such as flow rates, reagent concentrations,
solvents, and temperature. The main challenge lies in the concerted operation
of the hydrogenation, polarisation transfer, and purification steps, which
must all be completed before nuclear relaxation destroys the hyperpolarisation.
The proposed research consists of four work packages, each led by one
of the Co-PIs. WP 1 (Kuprov) focusses on modelling, using a novel approach
that treats spin and spatial degrees of freedom on an equal footing.
WP 2 (Levitt) deals with the required transfer of polarisation from the
parahydrogen spin order to the target metabolite. This requires design
of a novel microfluidic NMR probe system with separate detectors for
the transfer step and for downstream observation. WP 3 (Whitby) will focus
on the chemical aspects, including hydrogenation, cleavage, and purification.
Finally, WP 4 (Utz) deals with the microfluidic integration of these steps.
LoC devices provide detailed control over the growth conditions of cells,
tissues ("organ-on-a-chip"), and small organisms, providing valuable models
supporting the development of diagnostics and therapies, and drug safety
testing. NMR spectroscopy could be of great use in this context, as it allows
non-invasive quantification of metabolic processes. However, the limited
sensitivity of conventional NMR is exacerbated at the microlitre volume
scale of LoC devices. paraQchip will address that, pushing the limit
of detection from the millimolar concentration range down to micromolar. This will
allow detailed in-situ observation of metabolic processes in microfluidic
cell cultures as well as tissue and organ models, with many applications
in disease modelling, drug testing, and other aspects of the life sciences.
Microfluidic implementation of PHIP will also lead to deeper understanding
of the interplay between the hydrogenation reaction mechanism and nuclear
spin relaxation processes. The computational tools developed and validated
through paraQchip will benefit the development of hyperpolarised magnetic
resonance imaging techniques.
Organisations
- University of Southampton (Lead Research Organisation)
- University of Copenhagen (Collaboration)
- Technical University of Darmstadt (Collaboration)
- Johannes Gutenberg University of Mainz (Collaboration)
- Cambridge Cancer Centre (Collaboration)
- University of California, Berkeley (Collaboration)
- Swiss Federal Institute of Technology in Lausanne (EPFL) (Collaboration)
- University of Turin (Collaboration)
- University of Pennsylvania (Collaboration)
- Ćcole normale supĆ©rieure de Lyon (ENS Lyon) (Collaboration)
- Helmholtz Association of German Research Centres (Collaboration)
- Technical University Kaiserslautern (Collaboration)
- New York University (Collaboration)
- Max Planck Institutes (Project Partner)
Publications
Barker S.J.
(2022)
A MICROFLUIDIC PLATFORM FOR CONTINUOUS PRODUCTION OF 13C - HYPERPOLARIZED METABOLITES
in MicroTAS 2022 - 26th International Conference on Miniaturized Systems for Chemistry and Life Sciences
Barker SJ
(2022)
Direct Production of a Hyperpolarized Metabolite on a Microfluidic Chip.
in Analytical chemistry
Barker SJ
(2024)
Efficient Parahydrogen-Induced 13C Hyperpolarization on a Microfluidic Device.
in Journal of the American Chemical Society
Cartlidge TAA
(2022)
Theory and Simulation Framework for the Relaxation of Nuclear Spin Order in Porous Media.
in The journal of physical chemistry. B
Eills J
(2023)
Enzymatic Reactions Observed with Zero- and Low-Field Nuclear Magnetic Resonance.
in Analytical chemistry
| Description | The project aims to develop an integrated platform for the production of metabolites with very high nuclear spin polarisations. This is important because it would make it easier to study biochemical processes in cells by nuclear magnetic resonance spectroscopy. To obtain high spin polarisations, chemical and physical processing steps must be carefully coordinated. We have developed the technology to do this using microfluidic devices ("Lab-on-a-chip"), and have succeeded in integrating chemical reaction chambers, gas exchangers, and valves in a way that allows direct observation by nuclear magnetic resonance. Currently, this only works for a small number of metabolites, such as pyruvate. We have discovered a new chemical paradigm that may extend the method to many other metabolites, such as glucose and various amino acids. |
| Exploitation Route | The new approach towards hyperpolarisation can be combined with advanced culture methods that use small clusters of cells (spheroids or organoids) as models for biomedical research. While this is beyond the scope of the project aside form a simple proof of principle, this is of major interest to the pharmaceutical industry, and may form the basis for commercially motivated future research. |
| Sectors | Agriculture Food and Drink Chemicals Healthcare Pharmaceuticals and Medical Biotechnology |
| Title | SpinDynamica software |
| Description | SpinDynamica software is a Mathematica-based system for analyzing, understanding, and simulating nuclear spin dynamics, with applications to NMR and MRI. |
| Type Of Material | Improvements to research infrastructure |
| Year Produced | 2018 |
| Provided To Others? | Yes |
| Impact | Widespread use in the NMR community |
| URL | http://www.spindynamica.soton.ac.uk/ |
| Title | Dataset for: SpinDynamica: Symbolic and numerical magnetic resonance in a Mathematica environment |
| Description | SpinDynamica is a set of Mathematica packages for performing numerical and symbolic analysis of a wide range of magnetic resonance experiments and phenomena. An overview of the SpinDynamica architecture and functionality is given, with some simple representative examples. |
| Type Of Material | Database/Collection of data |
| Year Produced | 2017 |
| Provided To Others? | Yes |
| Impact | Widely used worldwide for the analysis and understanding of nuclear magnetic resonance |
| URL | https://wiley.figshare.com/articles/dataset/Dataset_for_SpinDynamica_Symbolic_and_numerical_magnetic... |
| Description | Hyperpolarization collaboration |
| Organisation | Cambridge Cancer Centre |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | NMR techniques, materials, theory, simulations |
| Collaborator Contribution | MRI techniques, materials, methodology |
| Impact | Too complex to report here. |
| Start Year | 2010 |
| Description | Hyperpolarization collaboration |
| Organisation | Swiss Federal Institute of Technology in Lausanne (EPFL) |
| Country | Switzerland |
| Sector | Public |
| PI Contribution | NMR techniques, materials, theory, simulations |
| Collaborator Contribution | MRI techniques, materials, methodology |
| Impact | Too complex to report here. |
| Start Year | 2010 |
| Description | Hyperpolarization collaboration |
| Organisation | University of Copenhagen |
| Country | Denmark |
| Sector | Academic/University |
| PI Contribution | NMR techniques, materials, theory, simulations |
| Collaborator Contribution | MRI techniques, materials, methodology |
| Impact | Too complex to report here. |
| Start Year | 2010 |
| Description | Hyperpolarization collaboration |
| Organisation | University of Pennsylvania |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | NMR techniques, materials, theory, simulations |
| Collaborator Contribution | MRI techniques, materials, methodology |
| Impact | Too complex to report here. |
| Start Year | 2010 |
| Description | Hyperpolarization collaboration |
| Organisation | Ćcole normale supĆ©rieure de Lyon (ENS Lyon) |
| Country | France |
| Sector | Academic/University |
| PI Contribution | NMR techniques, materials, theory, simulations |
| Collaborator Contribution | MRI techniques, materials, methodology |
| Impact | Too complex to report here. |
| Start Year | 2010 |
| Description | Hyperpolarized fumarate |
| Organisation | Helmholtz Association of German Research Centres |
| Department | Helmholtz Institute Mainz |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Hyperpolarized fumarate |
| Organisation | Johannes Gutenberg University of Mainz |
| Department | Mainz Microtron MAMI |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Hyperpolarized fumarate |
| Organisation | Technical University Kaiserslautern |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Hyperpolarized fumarate |
| Organisation | Technical University of Darmstadt |
| Country | Germany |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Hyperpolarized fumarate |
| Organisation | University of California, Berkeley |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Hyperpolarized fumarate |
| Organisation | University of Turin |
| Country | Italy |
| Sector | Academic/University |
| PI Contribution | NMR expertise |
| Collaborator Contribution | NMR expertise |
| Impact | see publication list |
| Start Year | 2019 |
| Description | Simulations of nuclear spin relaxation |
| Organisation | New York University |
| Country | United States |
| Sector | Academic/University |
| PI Contribution | Experiments, samples, theory |
| Collaborator Contribution | Experiments, samples, theory |
| Impact | several publications |
| Start Year | 2019 |
| Title | SpinDynamica |
| Description | Large set of Mathematica packages for analyzing, simulating, and understanding NMR experiments. |
| Type Of Technology | Software |
| Year Produced | 2017 |
| Impact | widely used in NMR community |
| URL | http://www.spindynamica.soton.ac.uk |
| Description | BRSG Conference lecture: "Towards microfluidic NMR simulations: Fokker-Planck formalism" |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Invited lecture (by IK) at an international conference. |
| Year(s) Of Engagement Activity | 2022 |
