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Parahydrogen-Induced Hyperpolarisation For Microfluidic Perfusion Culture

Lead Research Organisation: University of Southampton
Department Name: Sch of Chemistry

Abstract

Nuclear magnetic resonance (NMR) is one of the most powerful tools for
investigating the structure, composition, and dynamics of living and non-living
matter. Its sensitivity is limited by the degree of alignment of nuclear spins,
which is small even in the strongest magnets. Hyperpolarisation techniques
such as parahydrogen-induced polarisation can produce much better spin
alignments, offering corresponding increases in sensitivity.

paraQchip aims provide lab-on-a-chip (LoC) cultures of cells with hyperpolarised
metabolites (pyruvate, fumarate) for high-sensitivity NMR monitoring of metabolism,
by integrating all steps of parahydrogen-induced polarisation (PHIP) onto the
chip. To this end, we propose an interdisciplinary research programme that uses
quantitative modelling of spin dynamics, transport, and kinetic processes
in tandem with experimental quantification of reaction and transport kinetics to
inform the design of the microfluidic chip layout, NMR detector, radiofrequency
pulse sequences, and operation parameters such as flow rates, reagent concentrations,
solvents, and temperature. The main challenge lies in the concerted operation
of the hydrogenation, polarisation transfer, and purification steps, which
must all be completed before nuclear relaxation destroys the hyperpolarisation.

The proposed research consists of four work packages, each led by one
of the Co-PIs. WP 1 (Kuprov) focusses on modelling, using a novel approach
that treats spin and spatial degrees of freedom on an equal footing.
WP 2 (Levitt) deals with the required transfer of polarisation from the
parahydrogen spin order to the target metabolite. This requires design
of a novel microfluidic NMR probe system with separate detectors for
the transfer step and for downstream observation. WP 3 (Whitby) will focus
on the chemical aspects, including hydrogenation, cleavage, and purification.
Finally, WP 4 (Utz) deals with the microfluidic integration of these steps.

LoC devices provide detailed control over the growth conditions of cells,
tissues ("organ-on-a-chip"), and small organisms, providing valuable models
supporting the development of diagnostics and therapies, and drug safety
testing. NMR spectroscopy could be of great use in this context, as it allows
non-invasive quantification of metabolic processes. However, the limited
sensitivity of conventional NMR is exacerbated at the microlitre volume
scale of LoC devices. paraQchip will address that, pushing the limit
of detection from the millimolar concentration range down to micromolar. This will
allow detailed in-situ observation of metabolic processes in microfluidic
cell cultures as well as tissue and organ models, with many applications
in disease modelling, drug testing, and other aspects of the life sciences.

Microfluidic implementation of PHIP will also lead to deeper understanding
of the interplay between the hydrogenation reaction mechanism and nuclear
spin relaxation processes. The computational tools developed and validated
through paraQchip will benefit the development of hyperpolarised magnetic
resonance imaging techniques.
 
Description The project aims to develop an integrated platform for the production of metabolites with very high nuclear spin polarisations. This is important because it would make it easier to study biochemical processes in cells by nuclear magnetic resonance spectroscopy. To obtain high spin polarisations, chemical and physical processing steps must be carefully coordinated. We have developed the technology to do this using microfluidic devices ("Lab-on-a-chip"), and have succeeded in integrating chemical reaction chambers, gas exchangers, and valves in a way that allows direct observation by nuclear magnetic resonance. Currently, this only works for a small number of metabolites, such as pyruvate. We have discovered a new chemical paradigm that may extend the method to many other metabolites, such as glucose and various amino acids.
Exploitation Route The new approach towards hyperpolarisation can be combined with advanced culture methods that use small clusters of cells (spheroids or organoids) as models for biomedical research. While this is beyond the scope of the project aside form a simple proof of principle, this is of major interest to the pharmaceutical industry, and may form the basis for commercially motivated future research.
Sectors Agriculture

Food and Drink

Chemicals

Healthcare

Pharmaceuticals and Medical Biotechnology

 
Title SpinDynamica software 
Description SpinDynamica software is a Mathematica-based system for analyzing, understanding, and simulating nuclear spin dynamics, with applications to NMR and MRI. 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? Yes  
Impact Widespread use in the NMR community 
URL http://www.spindynamica.soton.ac.uk/
 
Title Dataset for: SpinDynamica: Symbolic and numerical magnetic resonance in a Mathematica environment 
Description SpinDynamica is a set of Mathematica packages for performing numerical and symbolic analysis of a wide range of magnetic resonance experiments and phenomena. An overview of the SpinDynamica architecture and functionality is given, with some simple representative examples. 
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
Impact Widely used worldwide for the analysis and understanding of nuclear magnetic resonance 
URL https://wiley.figshare.com/articles/dataset/Dataset_for_SpinDynamica_Symbolic_and_numerical_magnetic...
 
Description Hyperpolarization collaboration 
Organisation Cambridge Cancer Centre
Country United Kingdom 
Sector Academic/University 
PI Contribution NMR techniques, materials, theory, simulations
Collaborator Contribution MRI techniques, materials, methodology
Impact Too complex to report here.
Start Year 2010
 
Description Hyperpolarization collaboration 
Organisation Swiss Federal Institute of Technology in Lausanne (EPFL)
Country Switzerland 
Sector Public 
PI Contribution NMR techniques, materials, theory, simulations
Collaborator Contribution MRI techniques, materials, methodology
Impact Too complex to report here.
Start Year 2010
 
Description Hyperpolarization collaboration 
Organisation University of Copenhagen
Country Denmark 
Sector Academic/University 
PI Contribution NMR techniques, materials, theory, simulations
Collaborator Contribution MRI techniques, materials, methodology
Impact Too complex to report here.
Start Year 2010
 
Description Hyperpolarization collaboration 
Organisation University of Pennsylvania
Country United States 
Sector Academic/University 
PI Contribution NMR techniques, materials, theory, simulations
Collaborator Contribution MRI techniques, materials, methodology
Impact Too complex to report here.
Start Year 2010
 
Description Hyperpolarization collaboration 
Organisation Ɖcole normale supĆ©rieure de Lyon (ENS Lyon)
Country France 
Sector Academic/University 
PI Contribution NMR techniques, materials, theory, simulations
Collaborator Contribution MRI techniques, materials, methodology
Impact Too complex to report here.
Start Year 2010
 
Description Hyperpolarized fumarate 
Organisation Helmholtz Association of German Research Centres
Department Helmholtz Institute Mainz
Country Germany 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Hyperpolarized fumarate 
Organisation Johannes Gutenberg University of Mainz
Department Mainz Microtron MAMI
Country Germany 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Hyperpolarized fumarate 
Organisation Technical University Kaiserslautern
Country Germany 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Hyperpolarized fumarate 
Organisation Technical University of Darmstadt
Country Germany 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Hyperpolarized fumarate 
Organisation University of California, Berkeley
Country United States 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Hyperpolarized fumarate 
Organisation University of Turin
Country Italy 
Sector Academic/University 
PI Contribution NMR expertise
Collaborator Contribution NMR expertise
Impact see publication list
Start Year 2019
 
Description Simulations of nuclear spin relaxation 
Organisation New York University
Country United States 
Sector Academic/University 
PI Contribution Experiments, samples, theory
Collaborator Contribution Experiments, samples, theory
Impact several publications
Start Year 2019
 
Title SpinDynamica 
Description Large set of Mathematica packages for analyzing, simulating, and understanding NMR experiments. 
Type Of Technology Software 
Year Produced 2017 
Impact widely used in NMR community 
URL http://www.spindynamica.soton.ac.uk
 
Description BRSG Conference lecture: "Towards microfluidic NMR simulations: Fokker-Planck formalism" 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Invited lecture (by IK) at an international conference.
Year(s) Of Engagement Activity 2022