IMMUNOREG: Memory of Self: Maintenance and memory of immunoregulatory responses
Lead Research Organisation:
University of Cambridge
Department Name: Pathology
Abstract
Regulatory T (Treg) cells are rare immune cells with powerful immunoregulatory functions. Loss of Treg cells results in lethal inflammation, while defects in their function are associated with autoimmunity and allergy. Treg cells also suppress immune responses in cancer. There is intense medical interest in exploiting the powerful functions of Treg cells but efforts to do so have thus far been disappointing - harnessing Treg cells to treat disease remains a major outstanding challenge for the field.
To work properly, Treg responses need to be long-lived: Treg cells that develop early in life need to function continuously throughout life to prevent lethal inflammation. Treg populations are maintained as we age despite reduced thymic output of new T cells. Maintenance of Treg responses is also critical to immunoregulatory memory, which limits harmful immune reactions upon repeated exposure to allergens and infection, and to Treg cell therapy. We presently lack a framework for understanding how Treg responses are maintained despite a continuous requirement for their immunoregulatory functions.
In many tissues, cell populations are maintained by quiescent stem cells which self-renew while giving rise to shorter-lived progeny. We have recently found that a critical characteristic of stem cells - quiescence - is required for Treg cells to be maintained over long periods of time.
Focussing our analyses on inflammatory responses during autoimmune diabetes and neuroinflammation, this research will test the hypothesis that long-lived Treg responses are hierarchically organised, with quiescent self-renewing progenitor cells giving rise to shorter-lived functionally active progeny (Aim 1). We will define molecular mechanisms by which quiescent cells are maintained and how these can be manipulated to improve therapy (Aim 2). By redefining how we think about Treg responses, we will shift the focus from activated Treg cells to their long-lived progenitors whose therapeutic harnessing will benefit patients with inflammatory diseases, transplantation and cancer.
To work properly, Treg responses need to be long-lived: Treg cells that develop early in life need to function continuously throughout life to prevent lethal inflammation. Treg populations are maintained as we age despite reduced thymic output of new T cells. Maintenance of Treg responses is also critical to immunoregulatory memory, which limits harmful immune reactions upon repeated exposure to allergens and infection, and to Treg cell therapy. We presently lack a framework for understanding how Treg responses are maintained despite a continuous requirement for their immunoregulatory functions.
In many tissues, cell populations are maintained by quiescent stem cells which self-renew while giving rise to shorter-lived progeny. We have recently found that a critical characteristic of stem cells - quiescence - is required for Treg cells to be maintained over long periods of time.
Focussing our analyses on inflammatory responses during autoimmune diabetes and neuroinflammation, this research will test the hypothesis that long-lived Treg responses are hierarchically organised, with quiescent self-renewing progenitor cells giving rise to shorter-lived functionally active progeny (Aim 1). We will define molecular mechanisms by which quiescent cells are maintained and how these can be manipulated to improve therapy (Aim 2). By redefining how we think about Treg responses, we will shift the focus from activated Treg cells to their long-lived progenitors whose therapeutic harnessing will benefit patients with inflammatory diseases, transplantation and cancer.
People |
ORCID iD |
| Rahul Roychoudhuri (Principal Investigator) |
Publications
Alvisi G
(2023)
High-Dimensional Single-Cell Profiling of Tumor-Infiltrating CD4+ Regulatory T Cells.
in Methods in molecular biology (Clifton, N.J.)
Collier C
(2024)
Intracellular K+ Limits T-cell Exhaustion and Preserves Antitumor Function.
in Cancer immunology research
Conti AG
(2023)
Orthogonal engineering of synthetic T cell states to enhance cancer immunotherapy.
in Nature immunology
Imianowski CJ
(2024)
IFN? Production by Functionally Reprogrammed Tregs Promotes Antitumor Efficacy of OX40/CD137 Bispecific Agonist Therapy.
in Cancer research communications
Lee CYC
(2024)
Tumour-retained activated CCR7+ dendritic cells are heterogeneous and regulate local anti-tumour cytolytic activity.
in Nature communications
Lise V
(2024)
Immune cell triads reprogram exhausted CD8+ T cells for effective tumor elimination.
in Cancer cell
Sardar P
(2025)
Gut microbiota-derived hexa-acylated lipopolysaccharides enhance cancer immunotherapy responses.
in Nature microbiology
Scirgolea C
(2024)
NaCl enhances CD8+ T cell effector functions in cancer immunotherapy.
in Nature immunology
| Description | We have started to discover the molecular mechanisms which maintain Treg cells, cells important for preventing inflammatory disease but also for promoting immune suppression in cancer |
| Exploitation Route | Development of Treg cell targeted therapies for autoimmunity allergy and cancer |
| Sectors | Pharmaceuticals and Medical Biotechnology |
| Description | We are in the process of spinning out a biotechnology company which aims to enhance the efficacy of T cell therapies based on intellectual property arising from this work |
| First Year Of Impact | 2024 |
| Sector | Pharmaceuticals and Medical Biotechnology |
| Impact Types | Societal Economic |
| Title | GS-TCGA: Gene Set-based Analysis of The Cancer Genome Atlas |
| Description | Most tools for analysing large gene expression datasets, including The Cancer Genome Atlas (TCGA), focus on analysis of expression of individual genes or inference of the abundance of specific cell types from global gene expression data. While these methods provide useful insights, they can overlook crucial process-based information that could enhance our understanding of cancer biology. GS-TCGA is a resource designed to enable novel biological insights through gene set-based analyses of data from The Cancer Genome Atlas, leveraging gene sets from the Molecular Signatures Database (MSigDB). It consists of four tools: Gene Set Survival Analysis: GS-Surv allows the user to investigate how the average expression of genes in a specified gene set relates to overall survival in patient data. Co-Correlative Gene Set Enrichment Analysis: CC-GSEA allows generation of novel hypotheses of gene function through performing GSEA on co-correlated genes. Gene Set Correlative Analysis: GS-Corr calculates the average expression of a gene set and correlates this with individual genes. GS-Surv (Custom): This function allows you to upload your own gene set for GS-Surv survival analysis. GS-TCGA was created by Tarrion Baird in our lab in 2023 and can be accessed at: http://gs-tcga.roychoudhurilab.org/ |
| Type Of Material | Technology assay or reagent |
| Year Produced | 2023 |
| Provided To Others? | Yes |
| Impact | Gene set based analysis of TCGA data |
| URL | https://roychoudhurilab.org/datasets/ |
| Description | Collaboration between the University of Cambridge Department of Pathology and CRUK Cambridge Cancer Institute |
| Organisation | Cancer Research UK Cambridge Institute |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Describing the transcriptional changes associated with NK cell maturation |
| Collaborator Contribution | The research on NK cell maturation and function has fostered a collaboration between my group at the University of Cambridge and that of Dr Tim Halim at CRUK Cambridge Institute, enabling exchange of ideas and reagents |
| Impact | Scientific results (manuscript presently under review); High-content data |
| Start Year | 2020 |
| Description | Collaboration between the University of Cambridge and AstraZeneca UK PLC |
| Organisation | AstraZeneca |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | We will support a BBSRC CASE studentship to examine the mechanisms by which Treg cells undergo self-renewal for long-term maintenance |
| Collaborator Contribution | Contribution towards studentship stipend; 4 month industrial placement at AZ |
| Impact | Not yet published |
| Start Year | 2024 |
| Description | Collaboration between the University of Cambridge and the Wellcome Sanger Institute |
| Organisation | Wellcome Genome Campus |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | We have provided insights into the function of arhgef1 in immune regulation of cancer metastasis |
| Collaborator Contribution | Wellcome Sanger Institute provided a mouse strain useful for studying the function of Arhgef1 within T cells |
| Impact | Study findings pend publication - these are currently under review in Nature |
| Start Year | 2022 |
| Description | Collaboration with Professors Awen Gallimore and Andy Godkin |
| Organisation | Cardiff University |
| Country | United Kingdom |
| Sector | Academic/University |
| PI Contribution | Discussions around understanding Treg stemness and the influence of cyclophosphamide in depletion of activated Treg cells |
| Collaborator Contribution | Sample access from patients |
| Impact | N/A |
| Start Year | 2024 |
| Description | Funded collaboration with AstraZeneca in T cell therapy |
| Organisation | AstraZeneca |
| Country | United Kingdom |
| Sector | Private |
| PI Contribution | We have received substantial research funding for a collaboration with AstraZeneca to develop new ways of improving the efficacy of T cell therapy in cancer. This was funded as part of the AstraZeneca partners of choice wave4 programme, resulting in approximately $900,000 |
| Collaborator Contribution | We are undertaking the work in our laboratory in collaboration with researchers at Oregon health sciences University and the University of Nevarra |
| Impact | Still in progress |
| Start Year | 2024 |
| Description | Public event on cancer immunology and immunotherapy is part of the Cambridge Festival |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Public/other audiences |
| Results and Impact | About 70 members of the public attended a talk held by myself, Prof Klaus Okkenhaug and Dr James Jones about advances in our understanding of cancer immunology and how these have fed into cancer immunotherapies which are making transformative impacts on cancer therapy |
| Year(s) Of Engagement Activity | 2024,2025 |
| URL | https://www.festival.cam.ac.uk/events/using-immune-system-fight-cancer |