Harmonising and Unifying Blood Metabolomic Analysis Networks (HUMAN)
Lead Research Organisation:
Imperial College London
Department Name: Metabolism, Digestion and Reproduction
Abstract
Metabolomics provides a real-time view of the metabolic state of the examined samples. The past decade the field showed strong growth, however limitations intrinsic to the field hinder further application in epidemiology level. Key obstacles include: variety of analyte molecular structures, slow marker identification, large differences in concentrations, poor validation, incomplete combination of data from different analyses and fragmentation of research. The consortium brings together scientists from different complementary disciplines and sectors to collaborate and set a research training network, combining infrastructure experience, knowledge and skills. The research scope is to identify the source of problems that hinder development, and recommend measures to overcome these. Training through research will promote a new generation of omics researchers. Networking, joining forces via secondments will enhance research
productivity transfer of knowledge. The project will train 10 ESRs in work-packages aiming toward improvement of design of experiment, harmonization of analytical methods, improved Data Mining and biochemical pathway analysis and translational research. Application will be in the study of blood metabolome of exhaustive physical exercise.
We aim to study sample stability & preparation (including blood and alternative forms such as dried blood spots), biomarker identification, exploitation of multiple datasets, promote standard procedures, develop robust pipelines, develop and implement machine searchable notations of metadata, central database for data storage, compare datasets, automate cross-laboratory data combination, develop novel algorithms for multidimensional data mining and reconstruct biochemical pathways. The overall goal is to train the ESRs in cutting edge metabolomics research and at the same time provide proof of concept of democratizing metabolomics by the use of patient centric sampling.
productivity transfer of knowledge. The project will train 10 ESRs in work-packages aiming toward improvement of design of experiment, harmonization of analytical methods, improved Data Mining and biochemical pathway analysis and translational research. Application will be in the study of blood metabolome of exhaustive physical exercise.
We aim to study sample stability & preparation (including blood and alternative forms such as dried blood spots), biomarker identification, exploitation of multiple datasets, promote standard procedures, develop robust pipelines, develop and implement machine searchable notations of metadata, central database for data storage, compare datasets, automate cross-laboratory data combination, develop novel algorithms for multidimensional data mining and reconstruct biochemical pathways. The overall goal is to train the ESRs in cutting edge metabolomics research and at the same time provide proof of concept of democratizing metabolomics by the use of patient centric sampling.
Organisations
People |
ORCID iD |
| Elizabeth Want (Principal Investigator) |
Publications
De Sá E Silva D
(2023)
Volumetric Absorptive Microsampling in the Analysis of Endogenous Metabolites
in Metabolites
Kasapi M
(2024)
LAVASET: Latent Variable Stochastic Ensemble of Trees. An ensemble method for correlated datasets with spatial, spectral, and temporal dependencies.
in Bioinformatics (Oxford, England)
Yan Y
(2024)
Resolution Enhancement of Metabolomic J-Res NMR Spectra Using Deep Learning.
in Analytical chemistry
Yan Y
(2025)
MetAssimulo 2.0: a web app for simulating realistic 1D and 2D metabolomic 1H NMR spectra.
in Bioinformatics (Oxford, England)
| Description | Data Analysis Short Course |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Postgraduate students |
| Results and Impact | Data Analysis Shortcourse run by Prof Tim Ebbels. Dr Elizabeth Want and Thomas Rix taught on the course |
| Year(s) Of Engagement Activity | 2024 |
| Description | Great Exhibition Road Festival 2025 |
| Form Of Engagement Activity | Participation in an activity, workshop or similar |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Public/other audiences |
| Results and Impact | The Great Exhibition Road Festival is an annual event run by Imperial College London for members of the public to attend. HUMAN members have a stand which will educate the public about Chromatography, Mass Spectrometry and Data Analysis, key themes in the grant. |
| Year(s) Of Engagement Activity | 2025 |