Interlocked fullerene and endohedral metallofullerene hosts for molecular machine-like sensing

Lead Research Organisation: UNIVERSITY OF OXFORD
Department Name: Oxford Chemistry

Abstract

Mechanically interlocked molecules such as rotaxanes, which resemble a molecular abacus with rod-like molecules passing through one or more rings and catenanes, which are two or more interpenetrating rings, are firmly established entities in the field of nanoscale molecular machines because of their ability to undergo controlled and reversible molecular motion through changes in the relative positions of their constituent parts. The inherent dynamics of such molecules can be controlled by light, electrochemical and chemical-based stimuli. This proposal aims to exploit their unique topological interlocked host cavities to recognize guest molecules as a means of causing the ring component of a rotaxane or catenane to move from one position to another along an rod-like axle or larger ring component as a sophisticated means of sensing negatively charged species of biological, medical and environmental importance.
Through the attachment of nanoscale 'light bulbs' including luminescent metal 'filaments' inside an all carbon sphere-like football, to specific positions on the ring and axle components, the switching on or off of the light bulb is designed to occur when a target negatively charged species is recognised and causes ring components to slide or shuttle from one station position to another. Such materials can be thought of as "molecular machine-like sensors".
Coating these materials on to conducting and optically transparent surfaces will produce devices that will change colour and/or emit light and undergo electrochemical perturbation in response to the addition of a specific negatively charged substrate. Fundamentally, the project will add considerable volume to our understanding of how complex molecular architectures, designed to exhibit dynamic motion, respond when confined to the sorts of surfaces that will, ultimately, underpin their application.

Planned Impact

Through the construction of higher-order interlocked rotaxane and catenane host systems that contain integrated redox- and photo-active fullerenes and erbium-endohedral metallofullerene motifs, the aim of this project is to exploit the underdeveloped field of dynamic molecular recognition and transduction mechanisms as a means of sensing specific biological and pollutant dicarboxylate analytes.
The research theme of mechanically bonded interlocked host molecule assembly for targeted molecular recognition and sensing applications relates directly to one of the physical sciences Grand Challenges, 'Directed Assembly of Extended Structures and Targeted Properties' and also fits with the EPSRC priority themes of 'Synthetic Coordination Chemistry and Synthetic Supramolecular Chemistry'. It also contributes to 'manufacturing in the future' high value chemical sector. The proposed work will make a significant and fundamental advance to the state-of-the-art in the field where the development of new dynamic mechanically interlocked molecule sensory materials will strengthen the UK's scientific knowledge base in areas of economic and societal benefit, most notably in healthcare personalized diagnostics and the monitoring of environmental pollutants.
Being fundamental research it is inherently difficult to predict long term benefit beyond the scientific community. In the shorter term, achieving an understanding of the fundamental processes that underpin the development of a new approach to 'molecular machine-like sensors' will lead to prototype sensors and probes for biological and environmental analytes within five years. In the longer term, in particular the chiral sensory systems developed during the course of this programme will have potential impact in healthcare and diagnostic medicine.

Publications

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Bak KM (2023) Engineered Binding Microenvironments in Halogen Bonding Polymers for Enhanced Anion Sensing. in Angewandte Chemie (International ed. in English)

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Bak K (2023) Fullerene-Functionalized Halogen-Bonding Heteroditopic Hosts for Ion-Pair Recognition in Journal of the American Chemical Society

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Pancholi J (2020) Halogen bonding motifs for anion recognition in Coordination Chemistry Reviews

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Patrick SC (2021) Real-time Voltammetric Anion Sensing Under Flow. in Chemistry (Weinheim an der Bergstrasse, Germany)

 
Description Negatively charged species known as anions are ubiquitous, playing fundamental roles in a range of chemical, biological, medical and environmental processes. Designing synthetic anion host systems that achieve the degree of affinity and selectivity displayed by natural anion binding proteins in real world aqueous media settings remains a challenge and is still far from being realised. In part this may be attributed to the inherent properties of anions being pH dependent species and exhibiting high hydration energies.

Through mimicking nature's biopolymeric protein architectures by designing hosts with binding cavities shielded from the bulk solvent environment, we have achieved anion recognition in competitive aqueous media by directly incorporating potent anion recognition motifs into a polymeric scaffold. This has been demonstrated through a comprehensive analysis of anion recognition and sensing with redox-active, halogen bonding (XB) polymeric host systems, in an unprecedented level of detail. Notably, the polymeric hosts consistently outperform their monomeric analogues, with especially large halide anion binding enhancements of ca. 50-fold observed in aqueous-organic solvent mixtures. These enhancements are rationalised by a consideration of generated low dielectric constant binding microenvironments from which there is appreciable solvent exclusion. This approach is potentially applicable to a range of hosts and target guest species, enabling recognition and sensing for healthcare and real world anthropogenic pollutant environmental monitoring applications.
Exploitation Route In the development of environmental and healthcare sensor technology, which includes chemical warfare agent monitoring.
Sectors Agriculture

Food and Drink

Environment

Healthcare

Security and Diplomacy