Precision medicine for diabetic Individuals: a joint Malaysia-UK Effort (PRIME) project

Lead Research Organisation: University of Dundee
Department Name: Molecular and Clinical Medicine

Abstract

Malaysia has the highest rate of diabetes in Asia and one of the highest in the world. Adding to this problem is the growing number of obese Malaysian children and adolescents who are now or will be affected by diabetes. The harmful effects of diabetes on the vasculature or blood vessels dominate the complications caused by diabetes. These vascular effects affect the heart (to cause heart attack, stroke and heart failure), feet (leading to amputations), eyes (to cause blindness) and kidneys (to cause kidney failure). This escalating diabetes pandemic with its cardiovascular complications has huge effects both for the affected individual and their society. Despite sugar-lowering diabetic drugs and control of other cardiovascular risk factors, people with diabetes continue to succumb to the cardiovascular-related diseases. While efforts are being made to combat this diabetic epidemic through public health measures, new strategies are clearly needed to address and prevent the cardiovascular complications of diabetes. In the UK, we have pioneered the concept of personalised medicine through the use of genetics to determine who will and will not respond to commonly used drugs in diabetes, as well as for heart protective drugs such as those that lower blood pressure and cholesterol. We have also made substantial inroads in the use of artificial intelligence to analyse digital pictures of patients' retinas to find features that reveal a patient's current disease status and is predictive of future risk of complications such as stroke and heart disease. However, the majority of these studies on how diabetes and the cardiovascular complications arise and how patients respond to medications are from white European ancestry populations despite the fact that diabetes in Europeans is very different to diabetes in Asians. There is therefore an urgent need for detailed research into the specific causes and cardiac consequences of diabetes in Asians including those in Malaysia in order to identify the processes that drive the onset of cardiovascular complications of diabetes that exist in Malaysian ethnicities and use this to understand how best to manage diabetes in Malaysia.

In our proposed PRIME partnership, we propose to build upon the precision medicine expertise in Dundee that includes the on-going £7 million NIHR Global Health Research Unit on Global Diabetes Outcomes Research INdia-Scotland Partnership for Precision medicine in Diabetes - INSPIRED (https://inspired-nihr.com/) project that is exploring specific differences in combinations of genomic, retinal and clinical determinants of complications of diabetes and therapeutic response between Scottish and the South Indian population. The plan is to embed insights from the on-going INSPIRED program into the PRIME project that will add value to each project. Using the available precision medicine expertise in Dundee, we will facilitate knowledge transfer to Malaysia for initial establishment of a similar concept using the Malaysian government initiated The Malaysian Cohort (TMC) study, that is the biggest and most comprehensive population-based cohort study in Malaysia. The overarching objective of the PRIME project is to develop an international collaboration between Dundee and Malaysia that will establish the potential for translation of precision medicine to management of diabetes and its associated cardiovascular complications in Malaysia.

Technical Summary

The overarching ambition of the PRIME Partnership programme is to establish inter-disciplinary expertise, build partnerships and a research platform amongst physician scientists, genetic epidemiologists, big data analysts, machine learning scientists and policy makers to cohesively deliver multi-level strategies to augment precision medicine for diabetes in Malaysia. We propose to build upon the precision medicine expertise in Dundee where we have recently established the £7 million NIHR Global Health Research Unit on Global Diabetes Outcomes Research INdia-Scotland Partnership for Precision medicine in Diabetes (INSPIRED) that aims to combine clinical, retinal and molecular information to achieve personalised diabetes treatment in India. The PRIME project we are proposing will leverage the INSPIRED Global Development initiative for the benefit of the Malaysia population. PRIME will involve two large, well phenotyped cohorts individuals with diabetes - the Tayside Bio-resource including GoDARTS (Genetics of Diabetes Audit Research Tayside Scotland) which will have access to 30,000 individuals with genome-wide genotype data with linkage to comprehensive electronic health records and the PRIME cohort within large population based The Malaysian Cohort study that will comprise of 5000 individuals with diabetes in Malaysia. The PRIME project will establish the PRIME cohort that will have their DNA genotyped and their detailed demographic and biophysical data digitised to provide a level of high-quality phenotyping and updated detailed follow-up. The plan is to embed insights from the ongoing INSPIRED programme into the PRIME project to identify at-risk individuals by their phenotypic, genetic and retinal imaging profiles. This will inform tailored population-specific interventions to reduce the impact of diabetes in Malaysia.

Planned Impact

The development, training, pilot work in this proposal will directly impact project participants -patients with diabetes, clinicians, researchers and healthcare planners in Malaysia and inform future research activity. This project will inform a pragmatic framework for the development and evaluation of precision medicine that can be rolled out in Malaysia. This project will help position Malaysia as a leader in the field of precision medicine in South East Asia and in the world to improve the health of patients with diabetes.

EXPECTED IMPACTS
1. Development of a high performing and sustainable collaboration between UK and the Malaysian researchers and clinicians
2. Increased capacity building, research infrastructure and knowledge generation in precision medicine in Malaysia
3. Knowledge transfer of project findings to inform precision medicine globally
4. Understanding of the feasibility and practicalities in performing future clinical trials in precision medicine in Malaysia
5. Engagement with the industry though the availability of the resource and expertise within PRIME partnership
6. Establishment of framework for the development and evaluation of precision medicine that can rolled out to South India and other LMICS through the NIHR GCRF funded INSPIRED project in order improve the health of patients with diabetes


DISSEMINATION AND DATA SHARING
We will use a variety of methods to ensure effective and impactful dissemination of the work of the group: an up-to-date project website; presentations at national (Malaysia and UK) and international cardiology and diabetes scientific conferences; peer review publications.
In order to promote the impact of the project findings on policy and practice, we will organise both a face-to-face launch first meeting and an end of project stakeholder event with healthcare policy makers and patient advocacy groups. We will work closely with our Malaysian partners in the format and invitation list for this event. At our first face to face group meeting we will establish a data sharing agreement for the project informed by the procedures of current best practice principles and identify routes for the engagement of stakeholders including local and national healthcare policy makers, patient groups and community representatives.
 
Description The PRIME collaboration has successfully established an inter disciplinary partnership between the UK and Malaysia involving physician scientists, genetic epidemiologists, data analysts, machine learning scientists and policy makers to work together to deliver multi-level strategies to augment precision medicine for type 2 diabetes in Malaysia. We have successfully established the PRIME cohort that have had their genetic information determined and importantly, they have been well characterised clinically with follow-up. This important dataset will help underpin future research on precision medicine for diabetes in Malaysia
Exploitation Route Work is underway to explore oppportunities for further funding directed towards implementation of our research findings to have an impact on precision medicine in clinical practice.
Sectors Communities and Social Services/Policy,Healthcare

 
Description 'Diabetes and heart failure: defining therapeutic strategies'. Research seminar, University of East Angila, Norwich. May 2018 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Professional Practitioners
Results and Impact Local research seminar in Norwich
Year(s) Of Engagement Activity 2018
 
Description 'Diabetes: Old drugs versus new?'. British Society of Heart failure, London Nov 2018, 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact British society of heart failure is the largest national meeting on heart failure
Year(s) Of Engagement Activity 2018
 
Description 'New agents for Diabetes treatment with positive CV outcomes'. World Congress of Cardiology and Cardiovascular Health, Dubai, United Arab Emirates, 5 to 8 December 2018. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact World Congress of cardiology
Year(s) Of Engagement Activity 2018
 
Description 'SGLT2 inhibition and heart failure'. SGLT2 Forum, Royal College of Physicians of London, November 2018. 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact A special focus group
Year(s) Of Engagement Activity 2018
 
Description A talk at Dr Mohan's Diabetes Centre in Chennai in March 2018 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact This was an invitation to speak on diabetes and cardiovascular diseases. I talked about this CSO funded project about the use of BNP to detect occult heart disease among asymptomatic diabetic individuals. This talk helped develop a collaborative project on rolling out BNP testing in India. As a result, we secured pump priming funding of GBP20,000 from the University of Dundee for this project
Year(s) Of Engagement Activity 2018
 
Description American Diabetes Association 78th Scientific Sessions ( Oral Presentation), Orlando, Florida. M Mohan, S Al-Talabany, A McKinnie, I Mordi, JSS Singh, S Gandy, F Khan, AM Choy, JG Houston, J George, AD Struthers, CC Lang. Metformin regresses left ventricular hypertrophy in normotensive patients with coronary artery disease without type 2 diabetes mellitus - The MET-REMODEL trial. Diabetes 2018 Jul; 67(Supplement 1), 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact American Diabetes Association 78th Scientific Sessions ( Oral Presentation), Orlando, Florida is the world's largest, most prominent meeting on diabete
Year(s) Of Engagement Activity 2018
URL http://diabetes.diabetesjournals.org/content/67/Supplement_1/167-OR
 
Description British Cardiovascular Society 2018, Manchester, UK (Oral Presentation) 3. Mohan M, Al-Talabany S, McKinnie A, et al Metformin regresses left ventricular hypertrophy in normotensive patients with coronary artery disease without type 2 diabetes mellitus - the met-remodel trial Heart 2018;104:A6 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Professional Practitioners
Results and Impact The British Cardiovascular Society is the voice for all those working in the fields of cardiovascular care and research in the UK; we aim to represent and support both the professionals who work in cardiology and the patients for whom we want to encourage the best possible treatment.
Year(s) Of Engagement Activity 2018
 
Description Circulation on the Run Podcasst 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact This is a podcast called Circulation on the Run that featured the RECEDE-CHF published in Circulation
Year(s) Of Engagement Activity 2020
URL https://podbay.fm/p/circulation-on-the-run/e/1604343600
 
Description European Society of Cardiology Congress 2018 (Oral Presentation), Munich, Germany. M Mohan, S Al-Talabany, A McKinnie, I Mordi, JSS Singh, S Gandy, F Khan, AM Choy, JG Houston, J George, AD Struthers, CC Lang. Metformin regresses left ventricular hypertrophy in normotensive patients with coronary artery disease without type 2 diabetes mellitus - The MET-REMODEL trial. European Heart Journal, Volume 39, Issue suppl_1, 1 August 2018, ehy565.2358,https://doi.org/10.1093/eurheartj/ehy565.2358. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact European Society of Cardiology is the world's largest and most influential scientific congress for cardiovascular professionals
Year(s) Of Engagement Activity 2018
URL https://doi.org/10.1093/eurheartj/ehy565.2358.
 
Description PRECISION MEDICINE IN MALAYSIA: Ready for PRIME time. This International Webinar was used to launch the PRIME projected funded by the MRC Newton Ungku Omar fund. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact This is Webinar targeting a wide international audience to highlight Precision Medicine and its potential in Malaysia. It also allowed the PRIME partnership to be launched. A press release is planned.
Year(s) Of Engagement Activity 2020
URL http://www.ukm.my/umbi/prime/
 
Description PRecision medicine for diabetic Individuals: a joint Malaysia- UK Effort (PRIME): Close out Symposium 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Close to 100 professional practitioners, policy makers from the Ministry of Health of Malaysia and postgraduate students attended this close out symposium of the PRIME collaboration
Year(s) Of Engagement Activity 2023
URL https://www.ukm.my/umbi/news/prime-close-out-symposium/
 
Description Press Release of the PRIME Symposium 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact This is the Press RElease

PRESS RELEASE FROM THE UNIVERSITY OF DUNDEE
Diabetes expertise seeks to redress global health inequalities
The University of Dundee is to bring its expertise in diabetes, precision medicine and machine learning to bear on a project aiming to improve the outcomes for diabetics in Malaysia.
Dundee is partnering with the Malaysia-based UKM Medical Molecular Biology Institute (UMBI) on the £500,000 PRIME project, which will be officially launched at a webinar on Wednesday 23 September.
The global epidemic of type 2 diabetes poses an enormous public health challenge in low and middle-income countries (LMICs), where three-quarters of those with the disease live. Malaysia has one of the highest rates of type 2 diabetes in the world, with 3.6 million individuals - around 16.9% of the adult population - affected.
The majority of knowledge surrounding diabetes and its cardiovascular complications has been accumulated from studying white populations with Western European ancestry, despite the fact that diabetes in Europeans is very different to Asians.
Academics from Dundee will help to redress this balance by working with Professor Datuk Rahman Jamal's team at UMBI. Professor Rahman is currently the principal investigator for The Malaysian Cohort, the biggest and most comprehensive population-based study ever carried out in Malaysia. The extensive data on non-communicable diseases including will now help researchers learn more about diabetes in the country. For this collaboration, 5000 individuals with Type 2 diabetes will be genotyped comprehensively.
The team hope to identify genetic characteristics that enable the development of population-based screening to identify individuals at most risk of developing type 2 diabetes as well as genetic markers that could also be used to tailor treatment strategies for patients.
"The overarching aim of PRIME project is to build a high-performing partnership that will deliver precision medicine in terms of efficacy and safety for diabetics in Malaysia," said Professor Chim Lang, co-lead of the Dundee tranche of the project. "By doing so, we can identify the processes that drive the onset of the disease and the cardiovascular complications in Malaysian populations to understand how best to manage diabetes there.
"Professor Rahman is a lead researcher in genetics and population and we will capitalise on his vast bank of DNA data and partner it with expertise in precision medicine in Dundee. This forms the nucleus of a partnership that brings together physicians, genetic epidemiologists, big data analysts, machine learning scientists and policy makers to have a real impact on people's lives."
PRIME will also use retinal scanning technology developed by the University's Professor Emanuele Trucco, the other co-lead of the Dundee tranche, to better define a patient's disease status and predict future risk of complications.
Retinal screening enables deep-level analysis of blood vessels of the eye. Measuring the level of damage caused by diabetes enables doctors to evaluate what is happening to blood vessels in other areas of the body affected by the disease. This is of particular relevance to the heart as the outlook for diabetics is significantly worsened by the presence of cardiovascular disease.
By automating the process, Professor Trucco's VAMPIRE software enables scans to be analysed more speedily and more accurately.
"There is a lot of excitement around the potential for machine learning in medical research and treatment," continued Professor Lang. "In this instance the small vessels of eye allow us to have a direct visualisation of the blood vessels of our body.
"As a cardiologist I am extremely interested in technology that allows us to learn more about the blood vessels, which are of the utmost importance when it comes to treating diabetes and attempting to prevent the cardiovascular complications which make it so deadly."
Professor Rahman added, "The Malaysian Cohort project, which is similar to the UK Biobank in many aspects, is a gold mine for research in non-communicable diseases including diabetes and cardiovascular diseases. Diabetes is a major problem in Malaysia with a rising prevalence and the rising economic burden related to treatment of the disease and its complications is of major concern to the government.
"The diversity of ethnicity in the Malaysian population will allow the analysis of gene-gene and gene-environment interaction and also to identify biomarkers relevant to the local population, as well as to do a large-scale comparative analysis with populations from other countries. This collaboration with a top university from the UK will also allow transfer of technology and expertise between the two teams."
The new collaboration will leverage the knowledge generated by INSPIRED, a £7 million Dundee-led project that seeks to improve diabetes outcomes in India by working to better understand who gets diabetes, how it progresses, why some people respond better than others to treatments, and why some patients develop complications.
To do this, they need to study how genes influence susceptibility to type 2 diabetes in different populations, and the ethnic makeup of Malaysia (46% Malay, 33% Chinese, 16% Indian and 5% other) enables PRIME researchers to obtain information of potential use wherever these groups are found across the world.
PRIME is supported by the MRC Newton Ungku Omar Fund, an initiative that aims to develop science and innovation partnerships to promote the economic development and welfare of collaborating countries.
Year(s) Of Engagement Activity 2020