Developing a decision support tool to enable precision treatment of type 2 diabetes
Lead Research Organisation:
UNIVERSITY OF EXETER
Department Name: Institute of Biomed & Clinical Science
Abstract
Type 2 diabetes is very common throughout the world. Severe health problems can occur for people living with diabetes including blindness, kidney failure, amputations, heart attacks and strokes. These problems can be prevented if the blood glucose (sugar) is prevented from going too high. Most people with type 2 diabetes need medication to lower blood glucose: over 3 million people in the UK need these medicines. Although it is clear the first medicine to be used should be a tablet called Metformin, it is not clear what type of medicine should be used after this. Many medicines are available which on average lower blood glucose to a similar extent, but it is unclear which is the best to use for individual patients, who may respond differently to different medicines.
Our research group, in work funded by the MRC, has analysed the response to blood glucose lowering medicines in many thousands of people with diabetes both from their family doctor records and clinical trials. We have shown that simple features like a patient's sex, how overweight they are, and the results of blood tests are linked to how well a specific type of treatment lowers the blood glucose. This means we can now work out from simple, routinely collected, information which type of medicine is likely to lower blood glucose the most. This exciting work means that it will now be possible to choose the right type of medicine to best lower the glucose for each patient.
The aim of this project is to build on this information to develop a computer program, called a decision support tool, to work out which treatments would be best for a person with type 2 diabetes.
We have already developed a simple tool that combines different routinely available information to accurately predict which glucose lowering medicines will be most effective in lowering a person's blood glucose. However this has not been tested for all diabetes medicines and for people of different ethnicities, and there are many other aspects to consider when choosing treatment, for example whether side effects are likely, or whether a person has other conditions that affect treatment choice.
In the first part of this research project we will address these gaps. We will use information from over a million people with type 2 diabetes from healthcare records and clinical trials to:
1) Expand the tool so that it works for all diabetes medicines, and in people of all ethnicities
2) Expand the tool to predict whether people are likely to need to stop treatments quickly due to side effects.
3) Adapt the tool so that it recommends certain medicines in people with medical conditions that affect what medicine can or should be taken. For example, certain medicines have been shown to be better in people who have heart disease.
In the second part of the project we will test whether the tool can be improved by adding in additional information likely to be more available in the future, for example a person's genetic information, or blood tests that are not routinely tested. We will develop a process so that future changes - for example new features that predict response, or new medicines - can be made rapidly, keeping the tool up to date.
We will then work with people with diabetes, doctors, and nurses to determine the best way to present the results, so that they are easy to understand and helpful for informing discussions on which treatments to try. We will work with a computer programmer to make this tool into an online calculator or app.
This research is really important as it will provide a way to help people with diabetes receive the treatment they are most likely to benefit from, and avoid treatments that are likely to give them side effects. This could have important benefits for people with diabetes and the NHS, by reducing the complications of high blood glucose, and reducing the use of medicines which do not work well or cause unpleasant side effects.
Our research group, in work funded by the MRC, has analysed the response to blood glucose lowering medicines in many thousands of people with diabetes both from their family doctor records and clinical trials. We have shown that simple features like a patient's sex, how overweight they are, and the results of blood tests are linked to how well a specific type of treatment lowers the blood glucose. This means we can now work out from simple, routinely collected, information which type of medicine is likely to lower blood glucose the most. This exciting work means that it will now be possible to choose the right type of medicine to best lower the glucose for each patient.
The aim of this project is to build on this information to develop a computer program, called a decision support tool, to work out which treatments would be best for a person with type 2 diabetes.
We have already developed a simple tool that combines different routinely available information to accurately predict which glucose lowering medicines will be most effective in lowering a person's blood glucose. However this has not been tested for all diabetes medicines and for people of different ethnicities, and there are many other aspects to consider when choosing treatment, for example whether side effects are likely, or whether a person has other conditions that affect treatment choice.
In the first part of this research project we will address these gaps. We will use information from over a million people with type 2 diabetes from healthcare records and clinical trials to:
1) Expand the tool so that it works for all diabetes medicines, and in people of all ethnicities
2) Expand the tool to predict whether people are likely to need to stop treatments quickly due to side effects.
3) Adapt the tool so that it recommends certain medicines in people with medical conditions that affect what medicine can or should be taken. For example, certain medicines have been shown to be better in people who have heart disease.
In the second part of the project we will test whether the tool can be improved by adding in additional information likely to be more available in the future, for example a person's genetic information, or blood tests that are not routinely tested. We will develop a process so that future changes - for example new features that predict response, or new medicines - can be made rapidly, keeping the tool up to date.
We will then work with people with diabetes, doctors, and nurses to determine the best way to present the results, so that they are easy to understand and helpful for informing discussions on which treatments to try. We will work with a computer programmer to make this tool into an online calculator or app.
This research is really important as it will provide a way to help people with diabetes receive the treatment they are most likely to benefit from, and avoid treatments that are likely to give them side effects. This could have important benefits for people with diabetes and the NHS, by reducing the complications of high blood glucose, and reducing the use of medicines which do not work well or cause unpleasant side effects.
Technical Summary
In Type 2 diabetes (T2D) the many different classes of glucose-lowering therapies have an approximately similar efficacy overall and there is huge variation in prescribing patterns between doctors. We have shown in our previous MRC funded collaboration that the clinical characteristics of people with T2D are associated with altered glucose response, which allowed us to build a rational "precision" approach to match an individual to the most effective drug, by integrating routine features in prediction models. Drug decisions are complex and involve tolerability, safety and the impact of co-morbidities as well as efficacy in lowering glucose. This project will use routine clinical and individual trial data from over 1 million people with T2D to create validated integrated models that inform all these aspects of prescribing.
WP1: Best drug for glycaemia. We will extend and test our validated model for glucose lowering response so that it predicts glycaemic response to all non-insulin therapies used after Metformin. The model will then be optimised to work in all major UK ethnic groups.
WP2: Beyond glycaemia. We will create a model that predicts likely tolerability for a person with T2D for all therapies. We will integrate limitations to the therapeutic choice based on safety (e.g. contra-indications) and co-morbidities (e.g. if cardiovascular disease, suggest drugs with non-glycaemic cardiovascular benefit).
WP3: Looking ahead. Utilising genetics and novel biomarkers. We will examine the improvement in prediction by incorporating cutting-edge technologies such as genetics, novel biomarkers and data-driven sub-classification models.
WP4: Integrated tool ready for clinical use. All the inputs and outputs of the model will be integrated and put into an appropriate format for intended users. Working with people with T2D, nurses, and GPs, we will work up visualisations of outputs and create an online calculator/app version of the treatment support tool.
WP1: Best drug for glycaemia. We will extend and test our validated model for glucose lowering response so that it predicts glycaemic response to all non-insulin therapies used after Metformin. The model will then be optimised to work in all major UK ethnic groups.
WP2: Beyond glycaemia. We will create a model that predicts likely tolerability for a person with T2D for all therapies. We will integrate limitations to the therapeutic choice based on safety (e.g. contra-indications) and co-morbidities (e.g. if cardiovascular disease, suggest drugs with non-glycaemic cardiovascular benefit).
WP3: Looking ahead. Utilising genetics and novel biomarkers. We will examine the improvement in prediction by incorporating cutting-edge technologies such as genetics, novel biomarkers and data-driven sub-classification models.
WP4: Integrated tool ready for clinical use. All the inputs and outputs of the model will be integrated and put into an appropriate format for intended users. Working with people with T2D, nurses, and GPs, we will work up visualisations of outputs and create an online calculator/app version of the treatment support tool.
Organisations
Publications
Cardoso P
(2024)
Dirichlet process mixture models to impute missing predictor data in counterfactual prediction models: an application to predict optimal type 2 diabetes therapy.
in BMC medical informatics and decision making
Cardoso P
(2024)
Phenotype-based targeted treatment of SGLT2 inhibitors and GLP-1 receptor agonists in type 2 diabetes.
in Diabetologia
Dennis JM
(2025)
A five-drug class model using routinely available clinical features to optimise prescribing in type 2 diabetes: a prediction model development and validation study.
in Lancet (London, England)
Dennis JM
(2022)
Development of a treatment selection algorithm for SGLT2 and DPP-4 inhibitor therapies in people with type 2 diabetes: a retrospective cohort study.
in The Lancet. Digital health
Dennis John M.
(2022)
Development of a treatment selection algorithm for SGLT2 and DPP-4 inhibitor therapies in people with type 2 diabetes: a retrospective cohort study
in LANCET DIGITAL HEALTH
Güdemann LM
(2024)
Safety and effectiveness of SGLT2 inhibitors in a UK population with type 2 diabetes and aged over 70 years: an instrumental variable approach.
in Diabetologia
| Description | Developing clinical calculators to improve classification of atypical diabetes and diabetes in under-represented populations |
| Amount | £297,437 (GBP) |
| Organisation | Diabetes UK |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 01/2023 |
| End | 01/2026 |
| Description | Diabetes Data Science Catalyst |
| Amount | £300,000 (GBP) |
| Organisation | Diabetes UK |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 04/2022 |
| End | 04/2025 |
| Description | EFSD/Novo Nordisk Foundation Precision Diabetes Medicine Award Programme 2022 - Precision treatment of type 2 diabetes: understanding biomarker predictors of differential response to oral glucose lowering therapies in the TRIMASTER crossover trial. |
| Amount | 2,000,000Â kr. (DKK) |
| Organisation | European Association for the Study of Diabetes (EASD) |
| Department | European Foundation for the Study of Diabetes (EFSD) |
| Sector | Academic/University |
| Country | Germany |
| Start | 11/2022 |
| End | 10/2024 |
| Description | Individual-level cardiovascular & heart failure risk stratification to inform precision SGLT2-inhibitor treatment - Rising Star Award, John Dennis |
| Amount | 223,285Â kr. (DKK) |
| Organisation | European Association for the Study of Diabetes (EASD) |
| Sector | Charity/Non Profit |
| Country | Germany |
| Start | 09/2022 |
| End | 10/2023 |
| Description | NIHR Exeter BRC |
| Amount | £15,785,846 (GBP) |
| Funding ID | NIHR203320 |
| Organisation | National Institute for Health and Care Research |
| Sector | Public |
| Country | United Kingdom |
| Start | 12/2022 |
| End | 11/2027 |
| Description | Outcomes-based data science to optimise individual therapy choice in type 2 diabetes |
| Amount | £799,814 (GBP) |
| Funding ID | 227070/Z/23/Z |
| Organisation | Wellcome Trust |
| Sector | Charity/Non Profit |
| Country | United Kingdom |
| Start | 03/2024 |
| End | 03/2029 |
| Description | The iDiabetes Platform: Enhanced Phenotyping of patients with diabetes for Precision Diagnosis, Prognosis and Treatment |
| Amount | £2,800,000 (GBP) |
| Organisation | Chief Scientist Office |
| Sector | Public |
| Country | United Kingdom |
| Start | 05/2022 |
| End | 05/2026 |
| Title | Type 2 Diabetes Treatment Selection Decision Aid |
| Description | A decision aid to support type 2 diabetes care in primary care. The decision aid identifies the likely best drug class for a particular person with type 2 diabetes based on their characteristics. |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2020 |
| Provided To Others? | No |
| Impact | Model will require prospective validation in a trial prior to deployment in clinical practice. |
| Title | Type 2 Diabetes Treatment Selection Decision Aid |
| Description | A decision aid to support type 2 diabetes care in primary care. The decision aid identifies the likely best drug class for a particular person with type 2 diabetes based on their clinical characteristics. |
| Type Of Material | Computer model/algorithm |
| Year Produced | 2025 |
| Provided To Others? | Yes |
| Impact | First model using simple clinical features to support treatment selection in Type 2 diabetes. Model will require prospective validation in a trial prior to deployment in clinical practice. |
| URL | https://pm-cardoso.shinyapps.io/t2dtst/ |
| Description | Decision Tool Focus Group - Healthcare professionals |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Professional Practitioners |
| Results and Impact | Focus group for approx 20 healthcare professionals to present the treatment decision tool and discuss it's use and implementation in clinical care. Useful feedback for future tool development |
| Year(s) Of Engagement Activity | 2025 |
| Description | Decision Tool Focus Group - Patient group |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | Local |
| Primary Audience | Patients, carers and/or patient groups |
| Results and Impact | Focus group for approx 10 patients with Type 2 diabetes (and experience of treatment selection) to present the treatment decision tool and discuss it's use and implementation in clinical care. Useful feedback for future tool development |
| Year(s) Of Engagement Activity | 2025 |
| Description | Diabetes Endotypes: The Way Forward |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis Talk - 2023 "Diabetes Endotypes: The Way Forward" Emory Global Diabetes Research Center, USA. 16/11/2023 |
| Year(s) Of Engagement Activity | 2023 |
| Description | EASD/ADA precision diabetes medicine initiative Type 2 diabetes working group |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | EASD/ADA precision diabetes medicine initiative Type 2 diabetes working group (2021-) Involvement of Dr Angus Jones & Dr John Dennis |
| Year(s) Of Engagement Activity | 2021,2022,2023 |
| Description | East Meets West Meeting, Hong Kong |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | A lecture at the annual East Meets West symposium |
| Year(s) Of Engagement Activity | 2022 |
| Description | European Assocation for the Study of Obesity |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Lecture on precision approaches to obesity management |
| Year(s) Of Engagement Activity | 2023 |
| Description | Heterogeneity in type 2 diabetes |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis Talk - 2022 "Heterogeneity in type 2 diabetes". CIHR-INMD Heterogeneity in Nutrition and Metabolic Health symposium, Canada 14/10/2022 |
| Year(s) Of Engagement Activity | 2022 |
| Description | Is precision medicine the future for type 2 diabetes treatment? |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis Talk: "Is precision medicine the future for type 2 diabetes treatment?" Diabetes UK Knowing Diabetes Sessions 24/09/2024 |
| Year(s) Of Engagement Activity | 2024 |
| Description | Parsimonious Strategies for Precision Medicine in Practice - Lessons from the TriMaster Trial |
| Form Of Engagement Activity | A formal working group, expert panel or dialogue |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis talk - Keystone Symposia on Cardiometabolic Diseases, Vancouver Canada 06/02/2024 |
| Year(s) Of Engagement Activity | 2024 |
| Description | Precision Medicine for Type 2 Diabetes |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis Talk - 2023 "Precision Medicine for Type 2 Diabetes" Fondazione Internazionale Menarini, Barcelona, Spain. 30/11/2023 |
| Year(s) Of Engagement Activity | 2023 |
| Description | Precision Treatment of Type 2 Diabetes: Can Clinical Phenotypes Help Optimise Therapy Choice |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis Talk 2023 "Precision Treatment of Type 2 Diabetes: Can Clinical Phenotypes Help Optimise Therapy Choice?" South Asian Health Foundation 24th Annual Conference, Birmingham. 13/10/2023 |
| Year(s) Of Engagement Activity | 2023 |
| Description | Precision medicine in type 2 diabetes |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | Regional |
| Primary Audience | Professional Practitioners |
| Results and Impact | Talk - Precision medicine in type 2 diabetes South West Diabetes and CVRM Clinical Pharmacy Network Meeting Virtual |
| Year(s) Of Engagement Activity | 2023 |
| Description | Scotland's health research and innovation conference |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | Presentation on iDiabetes |
| Year(s) Of Engagement Activity | 2023 |
| Description | The importance of a personalised approach to the treatment of Type 2 Diabetes |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | Talk - The importance of a personalised approach to the treatment of Type 2 Diabetes XXXIV Annual Congress of the Spanish Society of Diabetes Valencia, Spain (Virtual) |
| Year(s) Of Engagement Activity | 2023 |
| Description | Using UK EHR to develop a precision approach for type 2 diabetes treatment |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | National |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis talk - 2024 "Using UK EHR to develop a precision approach for type 2 diabetes treatment" Health Data Research UK / BHF Data Science Centre: Diabetes Data Science Catalyst - Diabetes Community of Practice. 27/09/2024 |
| Year(s) Of Engagement Activity | 2024 |
| Description | Will seeing type 2 diabetes in HD... help choose the best treatment? |
| Form Of Engagement Activity | A talk or presentation |
| Part Of Official Scheme? | No |
| Geographic Reach | International |
| Primary Audience | Professional Practitioners |
| Results and Impact | John Dennis talk - "Will seeing type 2 diabetes in HD... help choose the best treatment?" European Association for the Study of Diabetes Conference 13/09/2024 |
| Year(s) Of Engagement Activity | 2024 |
