Mechanistic Basis for CENP-32 Mediated Regulation of Cell Division

Lead Research Organisation: University of Edinburgh
Department Name: Sch of Biological Sciences

Abstract

In the human body, trillions of cells undergo division every day. During each division, the genetic information which is in the form of chromosomes need to be equally and identically distributed to the newly formed daughter cells. Distribution of chromosomes is achieved by an elaborate machinery called the mitotic spindle. In humans, the mitotic spindle is formed by a filamentous network called microtubules which are organised by an organelle called centrosome. During cell division cells possess two centrosomes that move away from each other and orchestrate microtubule network to establish the mitotic spindle. The centrosomes form the opposite ends of the mitotic spindle where microtubule networks converge and are called spindle poles. Physical attachment of centrosomes to the spindle poles is crucial for distributing chromosomes and centrosomes accurately to the daughter cells. Defective distribution of chromosomes and/or centrosomes are associated with several human health disorders such as cancer, microcephaly and primordial dwarfism. Hence understanding how centrosomes are attached to the spindle poles is important to better understand the related medical conditions and to find a possible cure.

The proposed work focuses on an essential human protein called CENP-32, which when removed from cells results in the detachment of centrosomes from spindle poles affecting the integrity of the mitotic spindle. CENP-32 mutations have also been found in patients with neurodevelopmental disorders such as microcephaly, seizures and developmental delays. The mitotic spindle lacking centrosomes at the poles is not capable of distributing the chromosomes accurately and as a consequence will result in daughter cells with inappropriate chromosome and/or centrosome numbers, a condition often associated with cancer and developmental disorders. Proteins exert their function by interacting with and/or modifying biomolecules including proteins and nucleic acids (RNA and DNA). Proteins acquire their function through their three-dimensional structure which provides them their ability to interact with/modify other biomolecules. To understand how CENP-32, a likely RNA binding protein, ensures the physical attachment of centrosomes to spindle poles, we propose: (1) to study the structure of CENP-32 and identify the RNA modifications it makes, (2) to identify the proteins/RNA that CENP-32 interacts with, (3) to delineate how RNA modifying activity of CENP-32 facilitate centrosome-spindle pole attachment, and (4) assess how CENP-32 patient mutations affect CENP-32 activity and function.

The outcome of this research will advance our understanding of how centrosomes help build an intact mitotic spindle essential for generating daughter cells with correct genetic information. CENP-32 is a protein essential for cell survival, hence the outcome of the proposed research will also pave way for exploring the possibility of blocking CENP-32 function in cancer cells and rectifying CENP-32 defect in patients with associated neurodevelopmental disorders.

Technical Summary

The mitotic spindle is a microtubule-based apparatus responsible for segregating chromosomes and centrosomes to daughter cells during cell division. The bipolar structure of the mitotic spindle is formed by microtubules emanating from centrosomes that reside at opposite ends of the spindle forming the spindle poles. For error-free chromosome and centrosome segregation, centrosomes need to remain attached to spindle poles during mitosis. Centrosome detachment from spindle poles perturbs mitotic spindle integrity resulting in chromosome and centrosome segregation errors. Centrosome dysfunction and associated segregation errors are implicated in cancer, microcephaly and primordial dwarfism. Hence, understanding the mechanisms of centrosome-spindle pole attachment is of prime importance.

CENP-32, is a putative RNA methyltransferase essential for cell viability and centrosome-spindle pole attachment. Recent work from our collaborator has identified CENP-32 missense mutations in patients with neurodevelopment disorders. Here, we aim to obtain mechanistic understanding of how CENP-32 regulates centrosome-spindle pole attachment and how patient mutations affect CENP-32 function. Using an integrative structure-function analysis, we will: 1) characterise the structure and enzymatic activity of CENP-32, 2) identify cellular substrates and determine the structural basis for its substrate specificity, 3) elucidate the molecular basis for how CENP-32 activity regulates centrosome-spindle pole attachment using structure-guided mutants in cells, and 4) investigate how CENP-32 patient mutations affect the enzymatic activity and function of CENP-32.

The outcome will provide crucial insights into novel molecular pathways involving RNA modification/binding in regulating centrosome function and the mitotic spindle. Considering the direct disease relevance, this study will also open up new avenues for targeting CENP-32 to cure centrosome dysfunction related health disorders.
 
Description ERC Advanced Grant, Structural Basis for Centromere-Mediated Control of Error-Free Chromsome Segregation
Amount € 2,209,886 (EUR)
Organisation European Research Council (ERC) 
Sector Public
Country Belgium
Start 03/2023 
End 02/2028
 
Title Crystal Structure of SPOUT1/CENP-32 bound to SAM 
Description Crystal Structure of SPOUT1/CENP-32 bound to SAM, X-ray diffraction, 2.62A 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? Yes  
Impact Publication: https://doi.org/10.1038/s41467-025-56876-w 
URL https://www.rcsb.org/structure/8QSV
 
Title Crystal structure of SPOUT1/CENP-32 A356N 
Description Crystal structure of SPOUT1/CENP-32 A356N, X-ray diffraction, 2.5 A 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? Yes  
Impact Publication: https://doi.org/10.1038/s41467-025-56876-w 
URL https://www.rcsb.org/structure/8QSW
 
Title Crystal structure of SPOUT1/CENP-32 bound to SAH 
Description Crystal structure of SPOUT1/CENP-32 bound to SAH, X-ray diffraction, 2.38A 
Type Of Material Database/Collection of data 
Year Produced 2024 
Provided To Others? Yes  
Impact Publication: https://doi.org/10.1038/s41467-025-56876-w 
URL https://www.rcsb.org/structure/8QSU
 
Description Building a Research Ecosystem in Nepal 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact This event brought together researchers from the Research Institute from Bioscience and Biotechnology (RIBB, Nepal), the Nepal scientific diaspora in the UK and UK-based researchers working in Nepal to showcase collaborative Nepal-UK research activities to promote networking and boost research and research culture in Nepal. Several research collaborations arose as a result of the event.
Year(s) Of Engagement Activity 2024
 
Description Building a research ecosystem in Nepal 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact This event aimed to bring together the Nepal scientific diaspora in the UK and UK-based researchers working in Nepal to showcase collaborative Nepal-UK research activities and promote networking.
Year(s) Of Engagement Activity 2024
URL https://engagewithscience.org/building-a-research-ecosystem-in-nepal/
 
Description Hosting Nepalese researchers at the JP lab for capacity building in protein biochemistry 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Two researchers from Nepal, Suvechhya Bastola and Rojlina Manandhar, visited our lab for 2 weeks to promote their skills on protein expression and purification and general protein biochemistry approaches to then implement them in Nepal at the Research Institute for Bioscience and Biotechnology and be able to purify enzymes and proteins needed for their research activities.
Year(s) Of Engagement Activity 2024
URL https://engagewithscience.org
 
Description Meet the Microbes 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact Explore the world of microorganisms, including how they can be used to our advantage (e.g: to produce bread and yogurt) and how they can also be dangerous to our health. We use microscopes and hands-on activities with primary schools.
Year(s) Of Engagement Activity 2024,2025
URL https://engagewithscience.org/our-ribb-friends-are-again-visiting-the-uk-for-capacity-building-and-t...
 
Description Meet the Microbes 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Schools
Results and Impact We have run the workshop Meet the Microbes at different schools from disadvantaged areas in Nepal and Scotland. This workshop explores good and bad microbes while showing students how to use microscopes.
Year(s) Of Engagement Activity 2023,2024
URL https://engagewithscience.org
 
Description Promoting research activities at WCB among local schools and communities 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Schools
Results and Impact We have been part of different initiatives from the public engagement team of WCB to promote the research undertaken at WCB through art, including workshops at schools, science festivals and community festivals.
Year(s) Of Engagement Activity 2023,2024
 
Description Science in the City - Malta Science festival 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Participated at Science in the city, the science festival in Malta as part of an initiative of the public engagement team of WCB. We run two activities, one to discuss about the research undertaken at WCB using tattoos that represented different research activities at the centre and the second one to discuss about molecular aspects of disease.
Year(s) Of Engagement Activity 2023
 
Description Two-week capacity building workshop in Nepal in protein biochemistry 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact 2-week capacity building workshop in protein biochemistry for researchers in Nepal at the Research Institute for Bioscience and Biotechnology (RIBB, Nepal). The workshop focused on the expression and purification of a DNA polymerase with the aim of setting up a pipeline for in-house production of DNA polymerase to use in PCRs. The workshop solved a long-lasting problem for researchers in Nepal that struggle to purchase research-grade enzymes and proteins essential for their research activities. The two-week event was funded by the World Academy of Sciences (TWAS, UNESCO). As a result of the workshop, a protein science lab was created at RIBB.
Year(s) Of Engagement Activity 2023
 
Description Women in STEM talks 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Schools
Results and Impact We have participated in Women in STEM talks for schools in Scotland and Nepal to celebrate the role of women leading research and innovation while inspiring and building confidence in STEM. These talks have had a strong impact in shaping the perceptions of students who have been motivated by those role models and by their career paths. There has been an increased interest of girls that feel empowered to pursue a career in STEM.
Year(s) Of Engagement Activity 2024,2025
 
Description Women in STEM talks 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Schools
Results and Impact We have participated in Women in STEM talks for schools in Scotland and Nepal to celebrate the role of women leading research and innovation while inspiring and building confidence in STEM. These talks have had a strong impact in shaping the perceptions of students who have been motivated by those role models and by their career paths. There has been an increased interest of girls that feel empowered to pursue a career in STEM.
Year(s) Of Engagement Activity 2023,2024
URL https://engagewithscience.org