Ecological consequences of genetic variation: does genetic variation in a keystone parasitic plant species drive community response to infection?

Lead Research Organisation: University of Manchester
Department Name: Life Sciences

Abstract

This work is concerned with the ecological consequences of genetic variation. Ecological communities are made up of populations of many interacting species. Different types of interactions between species (e.g. parasitism, competition, predator-prey interactions) will have different consequences for the individual players involved. The effects of interactions between two species can often also be seen on the whole community, in the presence, absence, abundance or behaviour of different species. Within a population of a single species, individuals will vary in their response to the environment and to other interacting species. If this variation has a genetic basis and is linked to the fitness of the individual it can be selected upon and the population can adapt and evolve. Genetic differences among individuals within a single species can change the outcome of the interactions between that species and other partners. These differences can often be seen at the community level as changes in species diversity or abundance. Changes in community species diversity caused by genetic variation within individuals can have large implications for the conservation and management of ecological communities and in how they respond to environmental change. The study focuses on the parasitic interactions of a single species with its hosts, how genetic variation within the parasite changes the outcome of interactions with host species, and the effect that this has on host community species diversity. The focal species is a parasitic plant called Yellow Rattle (Rhinanthus minor L.), which is common to grasslands in the UK, Europe and some parts of North America. Presence of Yellow Rattle within grassland can have profound effects on the wider community. Direct interactions with host plants indirectly change the competitive interactions between plants in the community, and can result in an increase in plant species diversity. Previous experimental work has shown that the outcome of interactions between Yellow Rattle and its hosts depends on genetic variation within host and parasite. The key aims of this work are to discover whether genetic diversity in the parasite population (high diversity verses low diversity), specific genetic identity of the parasite (the effects of individual genotypes), or geographic origin of the yellow rattle are important factors in determining the outcome of infection on the host community, and the resultant change in host community species biodiversity. Secondary aims are to examine the role that host species diversity plays in conjunction with parasite genetic diversity in shaping grassland community structure. The work will provide valuable information for conservation management policy on how important genetic diversity is in maintaining species biodiversity in ecological communities. The research will begin in 2011 and continue for 3 years. It will be undertaken at the University of Sussex, Falmer, Brighton and will build on current work by researchers at the University on the ecology of Yellow Rattle. Genetic analysis of Yellow Rattle will be undertaken at, and in collaboration with, researchers from the NERC Biomolecular facility in Sheffield.
 
Description The purpose of this project was to investigate the importance of diversity both within (genetically based) and among species in ecological communities. I have shown that both species and genetic diversity are important things to consider when managing land for conservation or agriculture.
Exploitation Route My work provides insights into the dynamics and management of grassland and productive systems. This has potential implications for management of land for both conservation and agriculture. My work also illuminates the role of within species genetic variation on among species interactions. I have applied this to plant-parasite, plant pollinator and host-parasite systems and there are potential benefits, in particular to the management of agricultural areas for pollinators and other associated diversity that arise from my findings.
Sectors Agriculture, Food and Drink,Environment

 
Description Some of my findings will be used by Oliver Seeds in their seed catalogues to show how well clover cultivars attract pollinators to environmental seed mixtures.
First Year Of Impact 2013
Sector Agriculture, Food and Drink,Environment
Impact Types Economic

 
Description Daphne Jackson Trust Fellowship
Amount £56,173 (GBP)
Organisation University of Surrey 
Department Daphne Jackson Trust
Sector Charity/Non Profit
Country United Kingdom
Start 11/2015 
End 12/2017
 
Description Developing industrial links for CenGESS
Amount £10,567 (GBP)
Organisation Natural Environment Research Council 
Sector Public
Country United Kingdom
Start 11/2014 
End 04/2015
 
Description NERC Impact accelerator concept and feasibility
Amount £14,991 (GBP)
Organisation Research Councils UK (RCUK) 
Sector Public
Country United Kingdom
Start 06/2013 
 
Description NERC Impact accelerator grant
Amount £10,212 (GBP)
Organisation Research Councils UK (RCUK) 
Sector Public
Country United Kingdom
Start 03/2013 
End 03/2013
 
Description University of Manchester, Faculty of Life Sciences 'Promoting Interface Networking (PIN) initiative'
Amount £9,811 (GBP)
Organisation University of Manchester 
Sector Academic/University
Country United Kingdom
Start 01/2013 
End 12/2013
 
Title Data from: Biodiversity in agricultural landscapes: the effect of apple cultivar on epiphyte diversity 
Description  
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
 
Title Data from: The contrasting role of host species diversity and parasite genetic diversity - Journal of Ecology 
Description Raw data and R scripts of analyses performed were deposited in Dryad Digital Repository 
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
Impact Unknown to date 
URL https://datadryad.org/handle/10255/dryad.186474
 
Description Temporal dynamism, soil processes and niche complementarity: novel approaches to understanding the diversity-function relationships 
Organisation James Hutton Institute
Country United Kingdom 
Sector Charity/Non Profit 
PI Contribution This project is a 50:50 funded joint PhD studentship (starting date September 2016) where half of the funding comes from The University of Manchester. Myself and a colleague are supervising the student and managing the project with two members of JHI staff.
Collaborator Contribution This project is a 50:50 funded joint PhD studentship where half of the funding comes from The James Hutton Institute. Two members of JHI staff are co supervising the student and managing the project with myself and a colleague.
Impact Studentship agreement between The University of Manchester and The James Hutton Institute.
Start Year 2015
 
Description A sustainable future 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact Public engagement and outreach event at Manchester Museum - part of the adult education series 'Museum Meets'

The links between academic and support staff in the university have been strengthened as have the links between the university and the city council. For example, we are beginning to integrate the university's biodiversity plan into research and teaching activities and incorporate placements at the city council for our post graduate students.
Year(s) Of Engagement Activity 2013
 
Description Big Saturday Event on Parasitic Plants at Manchester Museum 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Outreach activity at Manchester Museum on Parasitic Plants

Closer contacts developed with Museum staff, knowledge exchange wit local community.
Year(s) Of Engagement Activity 2012
 
Description Cafe Scientifique talk - Vampire Plant Diaries 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Talk at Manchester Cafe Scientifique on parasitic plants.
Year(s) Of Engagement Activity 2016
 
Description Food@Manchester 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact I was filmed and interviewed for an initiative bringing together and advertising the research occurring at The University of Manchester that has a potential impact on food security. The result is a collection of videos on Youtube.

I received some feedback from viewers saying that they found the video interesting
Year(s) Of Engagement Activity 2013
URL http://www.youtube.com/watch?v=c8cDKgwQs6c
 
Description HEIF grant to develop links with local beekeeping organisations 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Visits to multiple beekeeping organisations across the North West and visits to national organisations and public bodies. The aim was to discuss research plans and recruit study participants.
Year(s) Of Engagement Activity 2015,2016
 
Description Performance art event organised by the Bristol Diving School collective 'The anatomy of seeing. A conversation' 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact The event sparked a lively discussion with and among the audience

The most notable impact for me was that it brought my research to a completely different audience, namely the artistic community. It was a very enjoyable and stimulating event that broke down some of the barriers between art and science.
Year(s) Of Engagement Activity 2014
 
Description Public lecture at Manchester Museum as part of the 'From the War of Nature exhibition' 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact The talk was well received and there were lots on interesting questions asked. The museum had provided specimens for the audience to look at, which engaged them in further discussion.

People seemed interested and to have learnt something from the activity
Year(s) Of Engagement Activity 2014
 
Description Royal Society Partnership grant (Beehaviour) with Bolton School (Dr M Proctor) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Schools
Results and Impact I was a partner on a Royal Society grant with Dr M Proctor at Bolton School. We devised and carried out a small research project with pupils at the school and undergraduates at the University of Manchester on how bumblebees respond to different flowers. The students set up an experiment and collected data over a number of months that was then compared to similar data collected by undergraduates for their projects.
Year(s) Of Engagement Activity 2014,2015,2016