Evolution of parasite reproductive strategies in natural infections

Lead Research Organisation: University of Edinburgh
Department Name: Inst of Evolutionary Biology

Abstract

Predicting how parasites adapt to their environment is becoming increasingly important. For example, changes to: the climate, composition of host-parasite-vector communities, and habitat, are implicated in the emergence of new infectious diseases of wildlife, crop species, livestock, and humans. More broadly, the in-host environment experienced by parasites also varies rapidly and extensively. Understanding how parasites cope with a variable in-host environment is central to understanding disease and infectiousness, as well as providing a framework for predicting parasite evolution in response to other changes in their ecology. We will use evolutionary theory to ask fundamental questions in evolutionary biology and infectious disease research: how do reproductive (transmission) strategies of protozoan parasites evolve? This group includes malaria (Plasmodium) parasites and cause some of the most serious pathogens of livestock, companion animals, wildlife, and humans. Despite the economic, medical, and veterinary importance of understanding the transmission strategies of malaria parasites, over a century of research has yielded remarkably little understanding of their basic reproductive biology. However, rapid progress has been made in recent years: new molecular tools have been developed and applied in an evolutionary framework to ask questions about parasite transmission. Data from this new approach are overturning the conventional wisdom: from the epidemiology of parasites to their behaviour during infections. For example, we have discovered that parasites fine-tune the production and sex ratio of transmission stages in remarkably sophisticated ways; according to their density within hosts, competition with other parasite strains, and whether their hosts are anaemic, mounting an immune response, or receiving drug treatment. These 'plastic family planning strategies' enable parasites to maximise transmission by matching their behaviour to the changing conditions they face during infections. However, these studies have focused on model parasites in laboratory experiments - whether these 'sophisticated' strategies occur in natural infections is controversial. We will address this by developing sensitive methods to quantify the production and sex ratio of transmission (reproductive) stages of human malaria (P. falciparum) parasites in the wild and testing whether evolutionary theory can explain their strategies. We have already developed these methods for a related species of malaria parasite and laid the groundwork for translating this assay to human parasites. Evolutionary theory predicts that parasite reproductive strategies will be shaped by the variation in their in-host environment that they encounter during infections. Most studies on parasite transmission have focused on either the number or sex ratio of transmission stages but evolutionary theory predicts these traits are simultaneously optimised - therefore they need to be investigated together and can only be understood in the context of each other. Explaining variation in the life-history traits exhibited by individuals is a major aim in evolutionary biology. There is also increasing interest in using an evolutionary approach to understand how parasite life-history traits shape within-infection dynamics and contribute to virulence and transmission. Given the sophisticated parasite strategies recently observed in lab experiments, investigating the behaviour of parasites in natural infections is timely and important. Understanding plasticity in the reproductive strategies of parasites is also central to predicting their short- and long-term responses to changes in their ecology: such as how habitat change, host shifts, or control measures influence the spread of disease.

Publications

10 25 50
 
Title ASCUS art exhibition 
Description ASCUS-CIIE microresidencies. 4 artsists created an exhibition based on science from the department including ours. Various lab members were involved. The exhibition "transmissions" was presented in various Scottish venues. The exhibition included artwork as well as film (featuring several lab members) 
Type Of Art Artwork 
Year Produced 2014 
Impact Inspiring collaboration with the artists involved, plus reaching a large audience through the exhibition of their work. 
URL http://www.ascus.org.uk/the-micro-residency-begins/
 
Description Malaria parasites replicate asexually in their hosts, enabling in-host survival, but must reproduce sexually to be transmitted between hosts. Despite the importance of malaria parasites, their reproductive strategies remain poorly understood. Previous data suggest that malaria parasites can adjust their investment in asexual vs. sexual stages, and females vs. males in response to their environment (e.g. competition with other strains of malaria, resource availability, anti-malarial drugs, and the inbreeding rate). Until now, studies have focused on model malaria systems: rodent parasites in vivo and human parasites in vitro. In this project, we tested the predictions of life history theory to explain the variation in reproductive effort and sex allocation of human malaria parasites from a natural population.

During the project we have:
1) Developed RT-qPCR assays to separately quantify male and female transmission stages of Plasmodium falciparum in field samples. Assays are published in Schneider et al (2015; DOI: 10.1016/j.molbiopara.2015.03.006). The manuscript is listed no. 6 of most downloaded articles for the journal, and the assay is currently in use by collaborators in a.o. the Gambia, Italy, the Netherlands, Oman, Sudan, Tanzania, UK and USA.
2) Provided proof-of-principle for the utility of an evolutionary framework to explain parasite traits in natural infections. As the same general principles underlie adaptation across taxa, understanding how reproductive strategies underlie transmission in this population will be applicable to areas with different endemic settings.
3) Applied the newly developed methods to complete a large dataset on natural P. falciparum infections in a markedly seasonal setting in the Sudan. We are in the process of completing papers based on the generated data including a) epidemiological analyses: effects of drug resistance, infection genetic diversity and seasonality on gametocytes; b) testing hypotheses for reproductive decisions: how variation in the in-host environment shapes the Plasmodium falciparum sex ratios in natural infections.
Exploitation Route We undertake engagement with groups spanning from evolutionary theoreticians, to parasitologists and clinicians, to immunologists. We expanded our engagement network aiming to include policy makers. Communication with these groups is central to using an evolutionary framework to inform disease treatment policy.
Policy makers are often interested in the evolutionary framework developed for parasites, but a link between experimental data and epidemiology - achieved by this project - is required to turn this interest into knowledge transfer. Knowledge transfer was achieved as follows:

- http://reecelab.science now contains lay summaries of all papers and contributions to the media.
- We expanded our collaboration with field researchers, as evident from use of the developed techniques in several countries, allowing us to develop this project by testing key findings in other natural populations.
- We have strong track records in communication with the media and contribute press releases on our work.
- Local science festivals, engagement events and online discussions.
- Schools: A visit by 6th form Biology students to our lab, communicating the value of evolutionary biology to all biological disciplines. A science session about mosquitoes was developed for nursery/primary schools.
- We supported an international postgraduate student, who has learned new skills (laboratory and data-analysis) and since completed her PhD.
-The RA on the project has learned many new skills and will start a PhD in September.
Sectors Education,Healthcare,Pharmaceuticals and Medical Biotechnology,Other

URL http://reecelab.science
 
Description presentations at Edinburgh Science Festival, School of Biological Sciences open days, exhibitions at schools, ASCUS 'transmissions' art exhibition, and media coverage.
First Year Of Impact 2011
Sector Education,Leisure Activities, including Sports, Recreation and Tourism,Culture, Heritage, Museums and Collections
Impact Types Cultural,Societal

 
Description NERC - standard grant
Amount £732,000 (GBP)
Funding ID NE/K006029/1 
Organisation Natural Environment Research Council 
Sector Public
Country United Kingdom
Start 04/2013 
End 04/2016
 
Description RoySoc - URF
Amount £465,000 (GBP)
Organisation The Royal Society 
Sector Charity/Non Profit
Country United Kingdom
Start  
 
Title sex-specific P. falciparum assays 
Description Assays to quantify male and female transmission stages of the human malaria parasite Plasmodium falciparum. Published in Schneider et al 2015. Quantification of male and female Plasmodium falciparum gametocytes by reverse transcriptase quantitative PCR. Mol Biochem Parasit 199: 29-33. DOI: 10.1016/j.molbiopara.2015.03.006. 
Type Of Material Technology assay or reagent 
Year Produced 2014 
Provided To Others? Yes  
Impact It is now possible to accurately quantify male and females transmission stages separately, facilitating the study of sex ratios as described in the project output for NERC NE/I015329/1 
URL http://dx.doi.org/10.1016/j.molbiopara.2015.03.006
 
Description NERC short grant 2011 collaborations 
Organisation Radboud University Nijmegen Medical Center
Country Netherlands 
Sector Academic/University 
PI Contribution Collaborators benefited from early access to the methods developed, and are co-authors on the resulting manuscript.
Collaborator Contribution The research methods developed during the project benefited from scientific input from our collaborators / co-authors.
Impact Development of assay to quantify male and female transmission stages of the human malaria parasite P. falciparum (molecular parasitology, published: http://dx.doi.org/10.1016/j.molbiopara.2015.03.006); application of these assays to datasets from natural parasite populations (epidemiology, paper in preparation; evolutionary ecology, paper in preparation). Outcomes as for the overall project: including knowledge transfer, media coverage, school activities, training of staff and students, science festivals and art projects
Start Year 2011
 
Description NERC short grant 2011 collaborations 
Organisation Sultan Qaboos University
Department College of Medicine and Health Sciences
Country Oman 
Sector Academic/University 
PI Contribution Collaborators benefited from early access to the methods developed, and are co-authors on the resulting manuscript.
Collaborator Contribution The research methods developed during the project benefited from scientific input from our collaborators / co-authors.
Impact Development of assay to quantify male and female transmission stages of the human malaria parasite P. falciparum (molecular parasitology, published: http://dx.doi.org/10.1016/j.molbiopara.2015.03.006); application of these assays to datasets from natural parasite populations (epidemiology, paper in preparation; evolutionary ecology, paper in preparation). Outcomes as for the overall project: including knowledge transfer, media coverage, school activities, training of staff and students, science festivals and art projects
Start Year 2011
 
Description NERC short grant 2011 collaborations 
Organisation University of Glasgow
Department School of Life Sciences Glasgow
Country United Kingdom 
Sector Academic/University 
PI Contribution Collaborators benefited from early access to the methods developed, and are co-authors on the resulting manuscript.
Collaborator Contribution The research methods developed during the project benefited from scientific input from our collaborators / co-authors.
Impact Development of assay to quantify male and female transmission stages of the human malaria parasite P. falciparum (molecular parasitology, published: http://dx.doi.org/10.1016/j.molbiopara.2015.03.006); application of these assays to datasets from natural parasite populations (epidemiology, paper in preparation; evolutionary ecology, paper in preparation). Outcomes as for the overall project: including knowledge transfer, media coverage, school activities, training of staff and students, science festivals and art projects
Start Year 2011
 
Description ASCUS art exhibition 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact ASCUS-CIIE microresidencies. 4 artsists created an exhibition based on science from the department including ours. Various lab members were involved. The exhibition "transmissions" was presented in various Scottish venues.
Year(s) Of Engagement Activity 2014
URL http://www.ascus.org.uk/the-micro-residency-begins/
 
Description Conference-BSP-Amal 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics. British Society for Parasitology Cambridge. Poster by Amal Gadalla
Year(s) Of Engagement Activity 2014
 
Description Conference-BSP2011-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics
Year(s) Of Engagement Activity 2011
 
Description Conference-BSP2015-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics
Year(s) Of Engagement Activity 2015
 
Description Conference-Biomalpar2012-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics, Biomalpar conference in Heidelberg Germany. Poster
Year(s) Of Engagement Activity 2012
 
Description Conference-Biomalpar2013-Amal 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics, Biomalpar conference Heidelberg, poster by Amal Gadalla
Year(s) Of Engagement Activity 2013
 
Description Conference-Biomalpar2013-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics, Biomalpar conference in Heidelberg Germany. Poster
Year(s) Of Engagement Activity 2013
 
Description Departmental seminar invitations 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Other audiences
Results and Impact Invited departmental seminar presentations (1-3 per year). Presentation of scientific results to academics.
Year(s) Of Engagement Activity 2007,2008,2009,2010,2011,2012,2013,2014,2015,2016,2017,2018,2019
 
Description Dept.talk-Liverpool2013-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Other audiences
Results and Impact invited presentation of research to academics
Year(s) Of Engagement Activity 2013
 
Description Dept.talk-Paisley2014-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Other audiences
Results and Impact invited presentation of research to academics
Year(s) Of Engagement Activity 2014
 
Description Edinburgh International Science Festival 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Research exhibition at the Edinburgh science festival.
Year(s) Of Engagement Activity 2015
 
Description Intl_Keynotes_SR 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Invited keynote presentations _ international (1-3 per year). Presentation of scientific results to academics.
Year(s) Of Engagement Activity 2010,2011,2012,2013,2014,2015,2017,2018,2019
 
Description Natl_Keynotes_SR 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Other audiences
Results and Impact Invited keynote presentations _ national (1-3 per year). Presentation of scientific results to academics.
Year(s) Of Engagement Activity 2006,2007,2008,2009,2010,2011,2012,2013,2014,2015,2016,2017,2018,2019
 
Description conference-BSP2013-PS 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact presentation of research to academics
Year(s) Of Engagement Activity 2013
 
Description press coverage 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact We have strong track records in communication with the media and contribute press releases on our work.
Year(s) Of Engagement Activity 2008,2009,2010,2011,2012,2013,2014,2015,2016,2017,2018