Coral pH regulation and climate change: using novel tissue cultures to assess the future of key habitat forming species

Lead Research Organisation: University of Edinburgh
Department Name: School of Geosciences

Abstract

Over 500 million people worldwide rely upon coral reefs for their livelihoods; either for food or through tourism. Consequently, threats to these reefs are of global concern, and the recent consensus statement signed by over 3000 international coral scientists on the threat of Climate Change to Coral Reefs highlights growing evidence and awareness of this. These coral reefs are found throughout the world's oceans and include the well-known tropical reefs, and the lesser-known cold-water coral reefs, which are found between 30 and 3000 m deep. All of these complex ecosystems support high amounts of life, and as such have been referred to as the 'rainforests of the seas'. Unfortunately, predicted rises in atmospheric carbon dioxide may have dire consequences for these key ecosystems, as increased carbon dioxide contributes to global warming and ocean acidification.
The problem is that the oceans absorb atmospheric carbon dioxide, and this causes a change in the carbon chemistry of the water, leading to a drop in pH. Currently, seawater pH is around 8.1, but this is projected to drop to around 7.8 by the end of the century. While this is not acidic, it is more acidic than it is now - hence the term 'ocean acidification'. This drop in pH affects the amount of calcium carbonate in the water; the same mineral that coral skeletons are made from. As the concentration of calcium carbonate drops, corals will find it harder to calcify, and any exposed skeleton could even dissolve. However, corals can increase their pH inside their tissue to prevent these effects, but the extent of this process, i.e. how much can corals increase their pH by, whether this is the same across all species, and how this changes under different conditions, remains unknown. To understand this, I will grow corals without skeletons as tissue cultures in environmentally controlled flasks. Cell tissue culture research has revolutionised bio-medical and pharmaceutical research. Their novel use here to address key research questions marks the start of a new and exciting direction in the field of coral biology. The use of tissue cultures to study pH regulation in this fellowship will also contribute to fundamental coral biology research about the specifics of coral calcification, which, after decades of intensive research, remain debated. To understand the extent to which corals can regulate their pH, I will use pH sensitive dyes and microscopes capable of generating 3D images to examine the calcifying area within organised coral cells. I will also look at the composition of new skeleton produced, in particular the boron content. The quantity of specific types of boron within the skeleton is pH dependent, so by analysing this in conjunction with pH sensitive dyes, coral internal pH regulation can be accurately calculated. This will also validate the technique for use in determining past ocean pH values by looking at the boron in fossilised corals.
This fellowship thus seeks to use boron and pH-sensitive dyes as tools to assess the future of coral reefs, but also to increase our understanding of how we can use them to study our past. By understanding how well (or poorly) different coral species can alter their internal pH across a variety of different conditions, we can begin to see which coral species will be 'winners or losers' in the face of future climate change, crucial for effective coral conservation efforts.

Planned Impact

Outside of academia, the main impact will be with the general public, school children, professional aquarists and policy makers.

For the general public and for schoolchildren, this will include knowledge exchange on the threats that coral reefs face (ocean acidification and warming) and on the cutting edge research that is being done (through this fellowship) to assess how corals will fare in the face of future climate change. This would raise awareness of the threats that coral reefs face. This will be achieved through an agreed outreach programme with The Deep (Hull) and the Horniman Museum (London) - see Pathways to Impact.

For professional aquarists and their associated industry, outreach will include live information on how different coral species will fare in predicted future conditions through CARN and the "Big Experiment" (see Pathways to Impact).

For policy makers, reports of key findings will be submitted to the IPCC working group II and the Convention of Biological Diversity expert panel on ocean acidification for the production of policy guiding documents. Additionally, reports will be submitted to local government representatives as local causes for ocean acidification can also be mitigated within existing laws (Kelly et al. 2011). Outputs from this fellowship would thus feed into influencing government policy and legislation. Modification of legislation to better protect the reefs of the future will impact and improve upon the future quality of life.

Publications

10 25 50

publication icon
Boilevin V (2023) Addressing Illegal Transnational Trade of Totoaba and Its Role in the Possible Extinction of the Vaquita in Journal of International Wildlife Law & Policy

 
Description That cold-water corals recognize 'self' on a species level rather than on an individual level. That while cold-water corals can acclimate to ocean acidification, this comes at a cost to the skeletal structure, with new skeleton being less organised in terms of crystal structure. That different species of cold-water coral differ with regard to their sensitivity to predicted changes in environmental variables. That the cold-water coral Desmophlum dianthus was more sensitive to changes in temperature than ocean acidification, and shifted from a mixed use of protein and fats for energy, to protein based energy when subjected to predicted future conditions, which is a much less efficient use of energy. Coral skeleton that is exposed to projected ocean acidification conditions starts to dissolve, making then approximately 20% weaker than currently. This has large implications for the scale of structure they can support, meaning that while cold-water corals may be able to survive in projected conditions to some degree, it is likely that the reef structures themselves will become smaller, possibly collapsing in on themselves. This means that cold-water coral reefs of the future may support less biodiversity than at present. Developed predictive maps for the presence of cold-water corals using water depth, habitat rugosity and current speeds. Predictive maps of live corals will be especially valuable for future long-term monitoring surveys, including those needed to understand the impacts of global climate change. Discovered a new ecological process in coral reef formation; the "Free Living Stabilisation Hypothesis" describes how certain coral species can settle on mobile substrate and grow to reef stabilising proportions, creating reefs in previously unstable habitats. This provides an explanation to the many occurrences of patch reefs in unsuitable habitats, and how reefs can recover from environmentally damaging events over decadal timescales. Reconstructed bleaching in tropical corals, indicating that bleaching has occurred historically, but frequency and prevalence is increasing.
Exploitation Route Findings form the basis of future policy recommendations for parties and countries to adopt at future Conference of Parties (COPs), and included in IPCC SROCC report. Findings also form the basis of new research in the ecological formation of coral reefs, for coral calcification in future ocean conditions, and for prediction of deep sea habitat tipping points.
Sectors Environment

URL https://www.research.ed.ac.uk/portal/en/persons/sebastian-hennige(6177a1da-9822-4a6b-913c-c1af0ca5b29d)/video.html
 
Description My work on the "Short-term metabolic and growth responses of the cold-water coral Lophelia pertusa to ocean acidification" (Hennige et al. 2014) was used in the Convention on Biological Diversity's report on the "Impact of ocean acidification on marine biodiversity", which had global coverage (over 500 websites, news and radio sources in over 30 countries). This document is used by climate change policy makers and organisations to support changes in policy recommendations. In addition to being covered on BBC Radio 4 Costing the Earth, and Inside Science, Hidden impacts of ocean acidification to live and dead coral framework (Hennige et al. 2015) was incorporated into the new Convention on Biological Diversity's (CBD) background document for "acidification in cold-water areas" dissemination to all party countries, and has been used for a "Specific Workplan on Acidification in Cold-Water Areas" (2016) by the Convention, where recommendations are provided to all party countries for policy implementation. Key findings have also been disseminated in the the IPCC SROCC report. This work has further been cited and used in the World Ocean Assessment II, and presented at COP26 in the Cryosphere Pavilion.
First Year Of Impact 2018
Sector Environment
Impact Types Policy & public services

 
Description Draft specific workplan on biodiversity and acidification in cold-water areas
Geographic Reach Multiple continents/international 
Policy Influence Type Implementation circular/rapid advice/letter to e.g. Ministry of Health
Impact This document for the Convention on Biological Diversity includes a list of management and research actions which countries and parties agree to and implement.
 
Description Specific workplan on biodiversity in cold-water areas within the jurisdictional scope of the Convention
Geographic Reach Multiple continents/international 
Policy Influence Type Citation in other policy documents
URL https://www.cbd.int/doc/recommendations/sbstta-20/sbstta-20-rec-04-en.pdf
 
Description UK Parliament Science & Technology Committee (Commons) Ocean Acidification Inquiry: Written evidence submitted by the University of Edinburgh School of Geosciences (OAC0017)
Geographic Reach Multiple continents/international 
Policy Influence Type Implementation circular/rapid advice/letter to e.g. Ministry of Health
 
Description Artist in Residence
Amount £15,000 (GBP)
Organisation The Leverhulme Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 02/2016 
End 08/2017
 
Description Collaborative Research Grant
Amount £49,376 (GBP)
Funding ID 50215 
Organisation Carnegie Trust 
Sector Charity/Non Profit
Country United Kingdom
Start 03/2016 
End 11/2017
 
Description Community-Based Aquaculture as a Catalyst for Locally Managed Marine Areas: Developing a Scalable Framework for Economic and Environmental Sustainability
Amount € 248,900 (EUR)
Organisation Prince Albert II Monaco Foundation 
Sector Charity/Non Profit
Country Monaco
Start 02/2018 
End 02/2020
 
Description Crumbling corals: Atlantic
Amount £40,000 (GBP)
Organisation Diamond Light Source 
Sector Private
Country United Kingdom
Start 07/2018 
End 12/2018
 
Description Crumbling corals: Pacific
Amount £40,000 (GBP)
Organisation Diamond Light Source 
Sector Private
Country United Kingdom
Start 11/2018 
End 12/2018
 
Description Diamond Beamtime
Amount £19,188 (GBP)
Organisation Diamond Light Source 
Sector Private
Country United Kingdom
Start 08/2017 
End 10/2017
 
Description Diamond Beamtime
Amount £60,000 (GBP)
Organisation Diamond Light Source 
Sector Private
Country United Kingdom
Start 03/2018 
End 03/2018
 
Description NERC Engaging Environments
Amount £97,133 (GBP)
Funding ID NE/R01180X/1 
Organisation Natural Environment Research Council 
Sector Public
Country United Kingdom
Start 01/2018 
End 01/2019
 
Description NERC Public Engagement Pilot
Amount £19,981 (GBP)
Funding ID Award: Public Engagement Pilot 2016_044 
Organisation Natural Environment Research Council 
Sector Public
Country United Kingdom
Start 01/2017 
End 04/2017
 
Description Open competition for robotics use in marine research
Amount £40,000 (GBP)
Organisation 2G Robotics 
Sector Private
Country United States
Start 03/2016 
End 04/2018
 
Title Ecology and physiology of coralliths at Vavvaru Island, Maldives 
Description This dataset was collated from surveys in the west side of Vavvaru Island, Lhaviyani Atoll, Maldives, to examine whether corals have the capacity to create their own stable habitat through free-living stabilisation. The data were collected during March 2015 as a series of triplicate 25 m x 2 m transects parallel to shore, at three locations on the reef flat: near (70 m from the shore), mid (140 m from the shore) and far (210 m from the shore). All locations were at similar depths of 1 m. Along each transect the number and size of all coralliths and total number of non-free living individuals were recorded, alongside with several environmental parameters (Water Temperature, Photosynthetically Available Radiation (PAR), Total Alkalinity, Dissolved Inorganic Carbon and Dissolved Oxygen). Abundance and size of coralliths was recorded through non-invasive techniques and the environmental parameters were obtained through multiple instruments: Fluorometer, Oxygen sensor, spectrophotometry, Titration and a PAR logger. The work was supported by an Independent Research Fellowship from NERC to Sebastian Hennige (NE/K009028/1, NE/K009028/2), an Independent Research Fellowship from the Marine Alliance for Science and Technology for Scotland to Heidi Burnett, an Independent Research Fellowship from the Royal Society of Edinburgh / Scottish Government (RSE 48701/1) and NERC (NE/H010025) to Nick Kamenos, a Gilchrist Fieldwork Award to Heidi Burnett, Sebastian Hennige and Nick Kamenos by the Gilchrist Educational Trust, administered by the Royal Geographical Society (with the Institute of British Geographers), and a Research Incentive Grant from the Carnegie Trust for the Universities of Scotland to Heidi Burnett, Sebastian Hennige and Nick Kamenos (grant number 70013). Field sampling was under permission from the Maldives Ministry of Fisheries and Agriculture ((OTHR) 30-D/lNDIV/2015). 
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
Impact 1. Hennige S.J., Burdett H.L.,Perna G., Tudhope A.W., Kamenos N.A. (2017) The potential for coral reef establishment through free-living stabilisation. Scientific Reports. 13322 (Covered by Reuters News) 
URL https://www.bodc.ac.uk/data/published_data_library/catalogue/10.5285/4f8efa6e-3c92-5f3e-e053-6c86abc...
 
Title Physical and visual effects of ocean acidification on cold-water coral (Lophelia pertusa) skeleton samples from the Southern California Bight, USA (2010-2015) and the Mingulay Reef Complex, UK (2012). 
Description This dataset contains visual and physical analyses of the impacts of ocean acidification on the skeletons of the cold-water coral Lophelia pertusa. Visual analysis includes synchrotron images from the Diamond Light Source and electron back scatter diffraction images on polished coral skeletons. Physical analyses include Raman spectroscopy data. Skeletal samples analysed were from the Southern California Bight (SCB), USA, and the Mingulay Reef Complex (MRC), UK. SCB samples were collected in 2010, 2014 and 2015. MRC samples were collected in 2012. Samples from the SCB cover an environmental gradient with respect to aragonite saturation, and corals from Mingulay were subjected to long-term experimentation in projected future conditions. SCB carbonate chemistry and sample metadata is included here, and conditions for MRC samples are outlined in Hennige et al. 2015. Ocean acidification is a threat to cold-water coral reefs in terms of dissolution to their skeletons, and their subsequent structural stability. This will likely determine the stability of the habitats they form. Work in the Southern California Bight was funded by the National Oceanic and Atmospheric Administration's (NOAA) National Centers for Coastal Ocean Science. The study was supported by Diamond Light Source (DLS) experimental campaigns MT19794 and MT20412. This work was supported by an Independent Research Fellowship from the Natural Environment Research Council (NERC) to Sebastian Hennige (NE/K009028/1 and NE/K009028/2) and the MASTS pooling initiative (The Marine Alliance for Science and Technology for Scotland, funded by the Scottish Funding Council (grant reference HR09011) and contributing institutions. Experimental incubations for N. Atlantic corals were supported by the UK Ocean Acidification programme (NE/H017305/1 to John Murray Roberts). Imaging analysis by Uwe Wolfram and Alexander Groetsch were supported by Engineering and Physical Sciences Research Council (EPSRC) of the UK under grant number EP/P005756/1. Fieldwork in Southern California was supported by NOAA National Centers for Coastal Ocean Science project "Vulnerability of Deep Sea Corals to Ocean Acidification", with additional funds from South Carolina Sea Grant Graduate Consortium R556, and the PADI Foundation 2013 Grant Award #7904. In kind support was provided by Channel Islands National Marine Sanctuary, National Marine Fisheries Service, the College of Charleston, SC, USA. Work done by Leslie Wickes and Peter Etnoyer at the Grice Marine Laboratory was also supported by NOAA. 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
Impact Publication of new article and incorporation of findings into key reports. 
URL https://www.bodc.ac.uk/data/published_data_library/catalogue/10.5285/aaf5a71d-75ea-38d5-e053-6c86abc...
 
Title Physiological measurements (respiration, calcification, ammonia excretion) from laboratory experiments on the effects of temperature and ocean acidification stressors on Desmophyllum dianthus 
Description Rising temperatures and ocean acidification driven by anthropogenic carbon emissions threaten both tropical and temperate corals. However, the synergistic effect of these stressors on coral physiology is still poorly understood, in particular for cold-water corals. This study assessed changes in key physiological parameters (calcification, respiration and ammonium excretion) of the widespread cold-water coral Desmophyllum dianthus maintained for ~8 months at two temperatures (ambient 12°C and elevated 15°C) and two pCO2 conditions (ambient 390 ppm and elevated 750 ppm). At ambient temperatures no change in instantaneous calcification, respiration or ammonium excretion rates was observed at either pCO2 levels. Conversely, elevated temperature (15°C) significantly reduced calcification rates, and combined elevated temperature and pCO2 significantly reduced respiration rates. Changes in the ratio of respired oxygen to excreted nitrogen (O:N), which provides information on the main sources of energy being metabolized, indicated a shift from mixed use of protein and carbohydrate/lipid as metabolic substrates under control conditions, to less efficient protein-dominated catabolism under both stressors. Overall, this study shows that the physiology of D. dianthus is more sensitive to thermal than pCO2 stress, and that the predicted combination of rising temperatures and ocean acidification in the coming decades may severely impact this cold-water coral species. 
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
Impact Gori A., Ferrier-Pagès C., Hennige S.J., Murray F., Rottier C., Wicks L.C., Roberts J.M. (2016) Physiological response of the cold-water coral Desmophyllum dianthus to thermal stress and ocean acidification. Peer J. 4:e1606 
URL https://www.bodc.ac.uk/data/published_data_library/catalogue/10.5285/5fbfe17b-3d18-2663-e053-6c86abc...
 
Description BBC interview about the NERC "She sees sea beasties on the seashore" Public Engagement project 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Public/other audiences
Results and Impact Interview on the purpose of the NERC PE project on "Sea beasties" (1230 Bulletin 060317)
Year(s) Of Engagement Activity 2017
URL https://soundcloud.com/bbc-highlands
 
Description Can sea monsters cope with climate change 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact Public lecture 'meet the scientist' invited talk at the Scottish Seabird Centre
Year(s) Of Engagement Activity 2019
 
Description Cold-water corals and ocean acidification - what does the future hold? 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Presentation at Reef Conservation UK, ZSL, December 2018
Year(s) Of Engagement Activity 2018
 
Description Conference talk. Engineering habitat and the Goldilocks Principle 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Invited talk on "Engineering habitat and the Goldilocks Principle" at the Marine Alliance of Science and Technology Scotland (MASTS) Annual Science Meeting, Glasgow, U.K.
Year(s) Of Engagement Activity 2016
 
Description Impacts of Ocean Acidification on deep sea corals 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Event at COP26 in the Cryosphere tent
Year(s) Of Engagement Activity 2021
 
Description Invited Plenary talk: How corals engineer habitat according to the Goldilocks principle. Deep Sea Coral Symposium, Boston, USA. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Invited plenary talk on "How corals engineer habitat according to the Goldilocks principle" at the Deep Sea Coral Symposium, Boston, USA.
Year(s) Of Engagement Activity 2016
 
Description Invited conference talk. How Goldilocks became a coral reef biologist at the Reef Conservation UK at Zoological Society of London, UK. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact Invited conference talk. How Goldilocks became a coral reef biologist at the Reef Conservation UK at Zoological Society of London, UK.
Year(s) Of Engagement Activity 2016
 
Description Invited talk as Sounding the Sea Symposium, Hull. Titled: Science, art and corals 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Sounding the sea symposium talk with artists, scientists and the general public. Lively debate after the talk.
Year(s) Of Engagement Activity 2017
 
Description Invited talk at Banyan Tree, Maldives: Looking to the past and the future; the role of cores and coralliths in coral ecology 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Invited talk at Banyan Tree, Maldives: Looking to the past and the future; the role of cores and coralliths in coral ecology. The audience asked many questions and reported back later that they had been out to look at some of the phenomena described in the talk.
Year(s) Of Engagement Activity 2017
 
Description Invited talk at Edinburgh Science Festival: Art and science, a two-way process 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Invited talk as a result of working with an artist in residence (Hannah Imlach) on the two way process between science and art. This led to a lot of discussion after the talk.
Year(s) Of Engagement Activity 2017
 
Description Reuters video on the ecological role of coralliths 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Video interview with Reuters on our paper on the newly discovered ecological role of coralliths in formation of coral reefs. Following the video being posted by BBC Earth, there have been over 600,000 views.
Year(s) Of Engagement Activity 2017
URL https://www.facebook.com/quartznews/videos/1877985432235150/?hc_ref=ARQBGD48X-RZ9GZqtK7HxeO1o7l95gm7...
 
Description School visit to Kilmuir & Staffin Primary School, Isle of Skye (NERC Seabeasties PE project) 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact School workshop for NERC funded project "She sees sea beasties on the seashore" (Hennige PI)
Year(s) Of Engagement Activity 2017
URL http://enlightenment.hw.ac.uk
 
Description School visit, Sgoil Dhalibroig (South Uist) for NERC Seabeasties project 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact Part of the NERC funded Publica engagement prroject "She sees sea beasties on the seashore"
Year(s) Of Engagement Activity 2017
URL http://enlightenment.hw.ac.uk
 
Description St Andrews Primary School, Isle of Bute for NERC Seabeasties project 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Schools
Results and Impact Part of the NERC She sees sea beasties on the seashore PE project
Year(s) Of Engagement Activity 2017
URL http://enlightenment.hw.ac.uk
 
Description Talk at European Coral Reef Symposium: The free-living stabilization hypothesis; how corals build new reefs 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Talk at the European Coral Reef Symposium (2017). Title of the talk was "The free-living stabilization hypothesis; how corals build new reefs"
Year(s) Of Engagement Activity 2017
 
Description What does the future hold for Cold-Water coral reefs? 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Invited seminar at Marum, Germany
Year(s) Of Engagement Activity 2020
 
Description Will we lose corals of the deep, and how will we know? Presentation at Scotlands first international marine conference. 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Policymakers/politicians
Results and Impact Talk at Scotlands International Marine Conference, organised by Scottish Government
Year(s) Of Engagement Activity 2019
 
Description Workshop on NERC Public Engagement project She sees sea beasties on the seashore. 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Supporters
Results and Impact Evening workshop at Dynamic Earth in Edinburgh on the NERC PE project "She sees sea beasties on the seashore"
Year(s) Of Engagement Activity 2017