Genomic Invasion and the Role of Behaviour in Rapid Evolution

Lead Research Organisation: University of St Andrews
Department Name: Biology

Abstract

LAY SUMMARY

I want to catch evolution in the act, and my proposal aims to test what happens to genomes when novel mutations "invade". Such an invasion could occur through spontaneous mutation in a section of DNA that codes for or regulates the activity of a gene, or by migration of genes from another population or species due to hybridization. I am particularly interested in how the ability of an organism to adjust its behaviour depending on the prevailing conditions might compensate for negative effects of such a genomic invasion and facilitate more rapid evolutionary change.

The emergence and spread of new mutations with a selective advantage is at the heart of the evolutionary process, but this process is extraordinarily challenging to observe in a natural system for two reasons: the first is that the likelihood of detecting such a genomic invasion is miniscule because they happen so rarely. The second is that evolutionary change has been thought to occur at a very slow pace, much longer than a researcher's lifetime.

My proposal capitalises on a textbook example of rapid evolution that is occurring right now in the Oceanic field cricket, Teleogryllus oceanicus. Male crickets usually sing to attract females for mating, but in the Hawaiian archipelago, they also attract a deadly parasitoid fly (Ormia ochracea). Recently, a mutation that feminises male wings by erasing sound-producing structures on male wings arose and spread. It is called flatwing, and it exists in two populations and appears to have different genetic origins. My research will work out what, exactly, has changed in the genome of these different populations to cause this mutant male type, and it will test how the rest of the genome has responded. In particular, I will make use of a time-series of genomic DNA collections from the wild to visualise and test how the genes that lie in close physical proximity to the mutation get "swept" along with it, or become homogenized with the rest of the genome. In other words, when the flatwing mutation invaded the T. oceanicus genome, two things may have happened. The first is that genes nearby got dragged along and are now over-represented in the population, and the second is that genes in other parts of the genome produced phenotypic effects that worked particularly well with the mutation, and therefore are more likely to be found in the mutant variety of males than in normal males.

I know from previous work that crickets are sensitive to their social environment, in particular, to the presence or absence of acoustic songs that males produce. Both females and males change their mating behaviour to suit the prevailing social conditions, and I will test the hypothesis that the flatwing mutation was able to spread in response to selection from parasitoids more rapidly because social flexibility enabled crickets to cope with the changed social environment, namely, the silent environment that emerged as flatwings became more numerous. I have devised a cricket tracking setup in the lab, which replicates the wild environment and which I can use to test cricket behaviour and mating success. It involves video and audio recording crickets, and enables me to manipulate the composition of interacting individuals during trials. In this manner, I can vary crickets' social experience, what population they are from, and the relative abundance of the different morphs, to test how social flexibility contributes to the reproductive success of mutant males. Results from these trials stand to illuminate how behaviour interacts with the evolutionary process, and how the rate of evolutionary change can be affected by the social environment and individual organisms' responses to that environment.

Planned Impact

Who will benefit:

The research I have outlined in my NERC Independent Fellowship application is centered on questions regarding the evolution of biological diversity, which falls squarely with NERC's biodiversity remit. Aside from the academic beneficiaries I have described elsewhere in this proposal, potential beneficiaries include policy-makers and the wider public. My Pathways to Impact document provides further detail about how I will deliver the benefits of my research to these beneficiaries, plus a detailed timeline of activities to ensure that results of my work are disseminated to UK taxpayers who fund the research, as well as to other academics. In a more general sense, impacts of my work will be immediately available once published, and I have a consistent record of timely publication.

How they will benefit:

The rapid and accelerating loss of biodiversity is a global phenomenon that has the potential to cause negative local impacts within the United Kingdom. Dramatic examples include collapse of fisheries, loss of key pollinators, permanent changes in ecosystem functioning and degradation of the quality of our natural environment. My proposal proposes basic scientific research to examine how genomes respond to invasion of new mutations of large effect. The dynamics of such genomic responses are likely to become increasingly relevant as climate change and anthropogenic disturbance increasingly generate novel selection pressures on wild organisms.

Further, I will track genome evolution in real-time, in natural populations and test longstanding but unresolved hypotheses about the nature of genomic change during rapid evolution and the role of behavioural flexibility in modulating that change. Behaviour could influence two relevant types of evolutionary processes: those that generate biological diversity, and those that maintain it. I expect that findings about causal links between social behaviour and these processes will interest those involved in the drafting and implementation of conservation policy. Anthropogenic changes in the physical environment clearly affect the long-term prognosis for species at risk, but the effects of changes in the social environment are less clear, and I expect data on this topic would be useful for informing "on-the-ground" conservation decisions.

The wider public has a stake in understanding biological diversity, both directly for the reasons mentioned above, and indirectly through quality of life considerations and potential future appropriation of biological resources for beneficial medical or agricultural purposes. In addition, basic insight into the natural world is clearly valued by the UK public: Sir David Attenborough's status as a national treasure attests to this. Such knowledge, however, overwhelmingly stems from the UK's commitment to basic research in the biological sciences, and as such, the information that I expect to gain from my fellowship work will add to this knowledge base. Such work increases the competitiveness of the UK by attracting talented scientists, enhancing the profiles of research institutions, and solidifying the UK's leading global reputation for fostering scientific insight and exchange.

Publications

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Bailey NW (2018) Evolutionary Consequences of Social Isolation. in Trends in ecology & evolution

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Bailey NW (2019) Testing the role of trait reversal in evolutionary diversification using song loss in wild crickets. in Proceedings of the National Academy of Sciences of the United States of America

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Bailey NW (2019) Social runaway: Fisherian elaboration (or reduction) of socially selected traits via indirect genetic effects. in Evolution; international journal of organic evolution

 
Title Can behaviour impede evolution? persistence of singing effort after morphological song loss in crickets 
Description Evolutionary loss of sexual signals is widespread. Examining the consequences for behaviours associated with such signals can provide insight into factors promoting or inhibiting trait loss. We tested whether a behavioural component of a sexual trait, male calling effort, has been evolutionary reduced in silent populations of Hawaiian field crickets (Teleogryllus oceanicus). Cricket song requires energetically costly wing movements, but 'flatwing' males have feminised wings that preclude song and protect against a lethal, eavesdropping parasitoid. Flatwing males express wing movement patterns associated with singing but, in contrast to normal-wing males, sustained periods of wing movement cannot confer sexual selection benefits and should be subject to strong negative selection. We developed an automated technique to quantify how long males spend expressing wing movements associated with song. We compared calling effort among populations of Hawaiian crickets with differing proportions of silent males, and between male morphs. Contrary to expectation, silent populations invested as much in calling effort as non-silent populations. Additionally, flatwing and normal-wing males did not differ in calling effort. The lack of evolved behavioural adjustment following morphological change in silent Hawaiian crickets illustrates how behaviour might sometimes impede, rather than facilitate, evolution. 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.g79cnp5m8
 
Title Data from: A silent orchestra: convergent song loss in Hawaiian crickets is repeated, morphologically varied, and widespread 
Description  
Type Of Material Database/Collection of data 
Year Produced 2019 
Provided To Others? Yes  
 
Title Data from: A test of genetic models for the evolutionary maintenance of same-sex sexual behaviour 
Description The evolutionary maintenance of same-sex sexual behaviour (SSB) has received increasing attention because it is perceived to be an evolutionary paradox. The genetic basis of SSB is almost wholly unknown in non-human animals, though this is key to understanding its persistence. Recent theoretical work has yielded broadly applicable predictions centred on two genetic models for SSB: overdominance and sexual antagonism. Using Drosophila melanogaster, we assayed natural genetic variation for male SSB and empirically tested predictions about the mode of inheritance and fitness consequences of alleles influencing its expression. We screened 50 inbred lines derived from a wild population for male-male courtship and copulation behaviour, and examined crosses between the lines for evidence of overdominance and antagonistic fecundity selection. Consistent variation among lines revealed heritable genetic variation for SSB, but the nature of the genetic variation was complex. Phenotypic and fitness variation was consistent with expectations under overdominance, although predictions of the sexual antagonism model were also supported. We found an unexpected and strong paternal effect on the expression of SSB, suggesting possible Y-linkage of the trait. Our results inform evolutionary genetic mechanisms that might maintain low but persistently observed levels of male SSB in D. melanogaster, but highlight a need for broader taxonomic representation in studies of its evolutionary causes. 
Type Of Material Database/Collection of data 
Year Produced 2015 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.t0c3s
 
Title Data from: Behavioural mechanisms of sexual isolation involving multiple modalities and their inheritance 
Description  
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
 
Title Data from: Indirect genetic effects and sexual conflicts: Partner genotype influences multiple morphological and behavioural reproductive traits in a flatworm 
Description  
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
 
Title Data from: Opposing patterns of intraspecific and interspecific differentiation in sex chromosomes and autosomes 
Description  
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
 
Title Data from: Release from intralocus sexual conflict? Evolved loss of a male sexual trait demasculinises female gene expression 
Description  
Type Of Material Database/Collection of data 
Year Produced 2019 
Provided To Others? Yes  
 
Title Data from: Sexual selection and population divergence I: the influence of socially flexible cuticular hydrocarbon expression in male field crickets (Teleogryllus oceanicus) 
Description  
Type Of Material Database/Collection of data 
Year Produced 2015 
Provided To Others? Yes  
 
Title Data from: Sexual selection and population divergence II. divergence in different sexual traits and signal modalities in field crickets (Teleogryllus oceanicus) 
Description  
Type Of Material Database/Collection of data 
Year Produced 2017 
Provided To Others? Yes  
 
Title Data from: Sexual selection and population divergence III. Interspecific and intraspecific variation in mating signals 
Description A major challenge for studying the role of sexual selection in divergence and speciation is understanding the relative influence of different sexually-selected signals on those processes in both intra and interspecific contexts. Different signals may be more or less susceptible to co-option for species identification depending on the balance of sexual and ecological selection acting upon them. To examine this, we tested three predictions to explain geographic variation in long- vs. short-range sexual signals across a 3,500+ km transect of two related Australian field cricket species (Teleogryllus spp.): 1) selection for species recognition, 2) environmental adaptation, and 3) stochastic divergence. We measured male calling song and male and female cuticular hydrocarbons (CHCs) in offspring derived from wild populations, reared under common garden conditions. Song clearly differentiated the species and no hybrids were observed suggesting that hybridisation is rare or absent. Spatial variation in song was not predicted by geography, genetics or climatic factors in either species. In contrast, CHC divergence was strongly associated with an environmental gradient supporting the idea that the climatic environment selects more directly upon these chemical signals. In light of recently advocated models of diversification via ecological selection on secondary sexual traits, the different environmental associations we found for song and CHCs suggest that the impact of ecological selection on population divergence, and how that influences speciation, might be different for acoustic vs. chemical signals. 
Type Of Material Database/Collection of data 
Year Produced 2020 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.wpzgmsbhr
 
Title Data from: Sexual signal loss: the link between behavior and rapid evolutionary dynamics in a field cricket 
Description  
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
 
Title Data from: Social effects on fruit fly courtship song 
Description  
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
 
Title Data from: Vestigial singing behaviour persists after the evolutionary loss of song in crickets 
Description  
Type Of Material Database/Collection of data 
Year Produced 2018 
Provided To Others? Yes  
 
Title Does the response of D. melanogaster males to intrasexual competitors influence sexual isolation? 
Description The evolutionary consequences of phenotypic plasticity are debated. For example, reproductive barriers between incipient species can depend on the social environment, but most evidence for this comes from studies focussing on the effects of experiencing heterospecific individuals of the opposite sex. In Drosophila melanogaster, males are well known to invest strategically in ejaculate components and show different courtship behaviour when reared in the presence of male competitors. It is unknown whether such plasticity in response to same-sex social experience influences sexual isolation, so we tested this using African and cosmopolitan lines which show partial sexual isolation. Males were housed in social isolation, with homopopulation, or with heteropopulation male partners. We then measured their mating success, latency, and duration, their paternity share, and female re-mating success. Isolated males copulated for a shorter duration than males housed with any male partners. However, we found no difference in any measure between homo- or heteropopulation treatments. Our findings suggest that the male intrasexual competitive social environment does not strongly influence sexual isolation in D. melanogaster, and that plastic effects on reproductive isolation may be influenced more strongly by the experience of social isolation, than by the composition of individuals within different social environments. 
Type Of Material Database/Collection of data 
Year Produced 2019 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.wwpzgmsfz
 
Title Fertility data from three generations of hybridisation crosses 
Description Numbers of eggs and offspring from three generations of hybridisation crosses (F1, BC1, BC2).The cross types are labelled based on the species X chromosome identity, C= T . commodus, O = T. oceanicus, while hybrid individuals have a prefix either F1 or BC1 and the species identity of their X chromosomes. The first letter represents the maternal species and the second the paternal species identity. (H) indicates an inter-species recombinant X. 
Type Of Material Database/Collection of data 
Year Produced 2016 
Provided To Others? Yes  
 
Title Testing the role of same-sex sexual behaviour in the evolution of alternative male reproductive phenotypes 
Description  
Type Of Material Database/Collection of data 
Year Produced 2019 
Provided To Others? Yes  
URL https://risweb.st-andrews.ac.uk:443/portal/en/datasets/testing-the-role-of-samesex-sexual-behaviour-...
 
Title Testing the role of trait reversal in evolutionary diversification using song loss in wild crickets (dataset) 
Description  
Type Of Material Database/Collection of data 
Year Produced 2019 
Provided To Others? Yes  
 
Title Within-generation and transgenerational social plasticity interact during rapid adaptive evolution 
Description The effects of within-generation plasticity versus transgenerational plasticity on trait expression are poorly understood, but important for evaluating plasticity's evolutionary consequences. We tested how genetics, within-generation plasticity, and transgenerational plasticity jointly shape traits influencing rapid evolution in the field cricket Teleogryllus oceanicus. In Hawaiian populations attacked by acoustically-orienting parasitoid flies, a protective, X-linked variant ("flatwing") eliminates male acoustic sexual signals. Silent males rapidly spread to fixation, dramatically changing the acoustic environment. First, we found evidence supporting flatwing-associated pleiotropy in juveniles: pure-breeding flatwing males and females exhibit greater locomotion than those with normal-wing genotypes. Second, within-generation plasticity caused homozygous-flatwing females developing in silence, which mimics all-flatwing populations, to attain lower adult body condition and reproductive investment than those experimentally exposed to song. Third, maternal song exposure caused transgenerational plasticity in offspring, affecting adult, but not juvenile, size, condition, and reproductive investment. This contrasted with behavioral traits, which were only influenced by within-generation plasticity. Fourth, we matched and mismatched maternal and offspring social environments and found that transgenerational plasticity sometimes interacted with within-generation plasticity and sometimes opposed it. Our findings stress the importance of evaluating the plasticity of different traits and stages across generations when evaluating their fitness consequences and role in adaptation. 
Type Of Material Database/Collection of data 
Year Produced 2022 
Provided To Others? Yes  
URL http://datadryad.org/stash/dataset/doi:10.5061/dryad.0rxwdbs4c