The role of trade-offs in the evolution of senescence

Lead Research Organisation: University of Oxford
Department Name: Zoology

Abstract

Spoiler alert: we are all going to die! Death is certain in all organisms: from bacteria, to us humans, and to the millenarian Bristlecone pines. However, the driving question in ageing research is not so much the end point, death, but rather what happens to our bodies before we reach that destination. Specifically, why do we become more fragile and decrepit prior to death? This increase in mortality risk and decline in fertility with age, known as senescence, has a strong influence on our lifetime agenda: the age at which we graduate from school, are expected to get married and have babies, get a permanent job and retire from it, to mention just a few. All of these are critical events in our lives that are established by governments using, among others, estimates of senescence rates of each country's human populations. When senescence is a bit slower, as in Northern European countries, and governments start to contemplate the idea of reducing the number of work hours per week while postponing the age at retirement, as it is currently being hotly debated in Germany and Denmark.

Get ready to be jealous: it turns out that senescence is not universal! Some animals and plants out there do not experience it. Yet, since the early inception of ageing research, the main theories to explain the occurrence of senescence have treated senescence itself as unavoidable and unescapable. My colleagues and I have recently disproved this fundamental tenet of life history theory in a publication in Nature. We have shown that, in fact, most plants and many animal species do not become more decrepit as they age. This finding drastically reshapes the direction that ageing research has taken historically. It is indeed a particularly exciting time to partake in ageing research because our finding has provoked a paradigm shift, forcing ageing research to move on from the question "Why do we senesce?" towards "Why and how do some species senesce but others do not?".

Do you wish to understand why we humans age? How about stepping away for a bit and examining how other species manage to escape senescence? My research will examine the mechanisms by which animal and plant species senesce or escape senescence. I will determine the aspects of a species' anatomy, physiology, habitat and evolutionary history that make it more or less vulnerable to ageing. To do so, I will examine the roles of physiological and macro-evolutionary trade-offs in the evolution or escape of senescence across the tree of life examining senescence trajectories in over 2000 animal and plant species from a database that I have developed in the last decade, and a set of long-term demographic datasets of species with complex life histories such as carnivorous plants or orchids with the ability of long-term dormancy (like a bear). Findings from this research are likely to pinpoint the habitats, abiotic conditions and features of taxonomic groups that allow species to operate at high performance levels for longer.

Planned Impact

In addition to the academic and commercial beneficiaries outlined below, my project has a great potential to appeal the general public. Just as many researchers have believed until very recently that ageing is inevitable, so did the general public. The communication through outreach activities that this is not the case is a primary point of outreach agenda. To engage with the general public, I will use the resources of the University of Sheffield and NERC to extend my research findings into the public's knowledge arena. I will also work with the Botanical Garden of Sheffield to organized sessions where children and adults will be informed on the various mechanisms by which plants can slow down ageing, while presenting them with some of the longest-lived records hosted in the greenhouses. In addition, I will continue with my active blogging activities and tweets on science matters.

As I did during my time in the USA, where I served as chair of the ESA Student Section and secretary of the Plant Population Ecology Section, I will take proactive steps towards engaging with the University of Sheffield early-career researchers, and with those of the British Ecological Society. Carrying out this task is something that will come natural to me, as I am one of the founders of the International Network of Next-Generation Ecologists (www.innge.net). I will use my past experiences with the ESA to work with the BES to create an early-career section that will secure continuity in economic and mentoring support of recently-graduated ecologists in the "limbo" postdoctoral/fellow stages.
 
Description Main abiotic drivers of senescence are associated with dry environments.
Exploitation Route Identifying gene x environment interactions that may result in the slowing down of or escape from senescence
Sectors Education,Environment

 
Description Multiple interviews and general public pieces on longevity and senescence, including BBC and ABCnews.
First Year Of Impact 2020
Sector Education
Impact Types Societal

 
Description A global open-access repository of plant and animal demographic data
Amount $604,923 (USD)
Organisation National Science Foundation (NSF) 
Sector Public
Country United States
Start 08/2017 
End 08/2020
 
Description Collaborative Research: Near term forecasts of global plant distribution, community structure, and ecosystem function
Amount $2,500,000 (USD)
Organisation National Science Foundation (NSF) 
Sector Public
Country United States
Start 08/2019 
End 08/2024
 
Description How will climate change and poaching affect endemic South African living rocks?
Amount £5,000 (GBP)
Organisation University of Oxford 
Sector Academic/University
Country United Kingdom
Start 03/2018 
End 12/2018
 
Description How will immortal species respond to climate change?
Amount £123,554 (GBP)
Organisation University of Oxford 
Sector Academic/University
Country United Kingdom
Start 03/2019 
End 04/2020
 
Description Practical utility of new classes of species distribution models
Amount $396,250 (AUD)
Organisation Australian Research Council 
Sector Public
Country Australia
Start 01/2018 
End 12/2020
 
Description sAPROPOS - Analysis of PROjections of POpulationS
Amount € 32,130 (EUR)
Organisation German Centre for Integrative Biodiversity Research 
Sector Charity/Non Profit
Country Germany
Start 09/2016 
End 12/2018
 
Title Rage 
Description Development of an R package for the analyses of demographic data and life history strategies, including rates of senescence 
Type Of Material Improvements to research infrastructure 
Year Produced 2018 
Provided To Others? Yes  
Impact The package, which is compiled in non-propietarial language (R) is now frequently used by other colleagues around the globe for the analyses of demographic performance and senescence. 
URL https://github.com/jonesor/Rage
 
Title Rcompadre 
Description An open-access R package for the manipulation of large data in COMPADRE 
Type Of Material Improvements to research infrastructure 
Year Produced 2021 
Provided To Others? Yes  
Impact The demographic data that I have made available open access in www.compadre-db.org can be daunting to navigate and analyse. I have co-developed a package that allows users to tackle and harness the power of these demographic data in a much faster and easier way 
URL https://github.com/jonesor/Rcompadre
 
Title ipmr 
Description An r package to build and analyse demographic data (with a strong emphasis on senescence) using integral projection models 
Type Of Material Improvements to research infrastructure 
Year Produced 2021 
Provided To Others? Yes  
Impact IPMs have become a widely used tools in demographic analyses, yet a challenging one to master. Here, we have develop an easy-to-use open-access R package to overcome this limitation. https://github.com/levisc8/ipmr 
URL https://github.com/levisc8/ipmr
 
Title PADRINO database 
Description A database of published integral projection models containing demographic data for hundreds of animal and plant species 
Type Of Material Database/Collection of data 
Year Produced 2021 
Provided To Others? Yes  
Impact A database that allows users to queue and access demographic data and models archived in the format of integral projection models 
URL https://github.com/levisc8/RPadrino
 
Description Advanced approaches to population modeling using Integral Projection Models 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact A 3-hour workshop teaching participants the parameterisation and implementation of integral projection models for ecological questions, organised at the EvoDemoS meeting at the University of Virginia, USA
Year(s) Of Engagement Activity 2016
 
Description All creatures fast and slow 
Form Of Engagement Activity A formal working group, expert panel or dialogue
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact I organised a three-day working group with research scholars and practitioners at the University of Oxford exploring ecological ramifications of the fast-slow continuum of life history theory
Year(s) Of Engagement Activity 2017
 
Description COMPADRE Plant Matrix Database & COMADRE Animal Matrix Database 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I organised a 3-h workshop at the Evolutionary Demography Society annual meeting in Lyon, France, to teach participants how to harness the demographic information from www.compadre-db.org for comparative analyses
Year(s) Of Engagement Activity 2018
URL https://evodemo2018.sciencesconf.org
 
Description Comparative approaches in ecology and evolution 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact A workshop hosted at the Max Planck Institute for Demographic Research (Rostock, Germany) where my international co-instructors and I taught state-of-the-art techniques to bring together ecological and evolutionary questions using big data
Year(s) Of Engagement Activity 2016
 
Description Dispatches of Frontiers in Ecology and the Environment 
Form Of Engagement Activity A press release, press conference or response to a media enquiry/interview
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact My work on demographic databases and their role in conservation science and zoos was highlighted in the dispatches of the prestigious general-public publication Frontiers in Ecology and the Environment
Year(s) Of Engagement Activity 2017
URL http://onlinelibrary.wiley.com/doi/10.1002/fee.1453/epdf
 
Description Evolution of Longevity across the Tree of Life 
Form Of Engagement Activity Participation in an open day or visit at my research institution
Part Of Official Scheme? No
Geographic Reach Regional
Primary Audience Public/other audiences
Results and Impact I run a 2 hour general public engagement session at the Museum of Natural History of the University of Oxford on their weekly sessions "Meet the Experts". I talked to the general public about the Evolution of Longevity across the Tree of Life
Year(s) Of Engagement Activity 2018
URL https://oumnh.ox.ac.uk/event/meet-the-experts-3
 
Description Integral Projection Models: construction, analyses and interpretation 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I organised a weeklong workshop to teach participants the implementation, analyses and interpretation of integral projection models in partnership with TransmittingScience, Barcelona, Spain
Year(s) Of Engagement Activity 2017
URL https://www.transmittingscience.org/courses/ecology/integral-projection-models-demography-continuous...
 
Description Integral Projection Models: construction, analyses and interpretation 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact A workshop organised with the partnership of TransmittingScience in Barcelona, Spain, to teach participants the construction, parameterisation and interpretation of integral projection models
Year(s) Of Engagement Activity 2016
URL https://www.transmittingscience.org/courses/ecology/integral-projection-models-demography-continuous...
 
Description International collaboration in ecology: why should I and how do I do It? 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Professional Practitioners
Results and Impact I was invited to give a talk on how to carry out international collaborations, highlighting some of the challenges and opportunities that doing so has brought to my own academic career. This event took place at the annual meeting of the Ecological Society of America
Year(s) Of Engagement Activity 2017
URL https://eco.confex.com/eco/2017/webprogram/Session13096.html
 
Description Introduction to matrix population models and comparative population biology using the COM(P)ADRE Matrix Databases 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I organised a 4-h workshop at the annual meeting of the Ecological Society of America to teach participant how to harness the analytical power of the COMPADRE and COMADRE open-access databases
Year(s) Of Engagement Activity 2017
URL https://eco.confex.com/eco/2017/webprogram/WORK.html
 
Description Introduction to population models and comparative demography 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact A three-day workshop teaching undergraduates, PhD students and postdocs at the University of Exeter tecniques to model population dynamics using matrix population models
Year(s) Of Engagement Activity 2016
 
Description Is senescence the rule or the exception? What can we learn from flatworms, desert shrubs, orchids, and iguanas? 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach Local
Primary Audience Public/other audiences
Results and Impact I gave a talk on my research on the evolution of senescence at the incipient Ageing Network Seminar of the University of Oxford, hosted by its Martin School
Year(s) Of Engagement Activity 2019
 
Description Lightning talk session on Projection of Demographic Responses to Climate Change 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I organised a lightning talk session showcasing the researcher carried out by 6 early career researchers in the working group "sAPROPOS" that I lead at the German Centre of Biodiversity iDiv, in Leipzig.
Year(s) Of Engagement Activity 2017
URL https://www.idiv.de/sdiv/working_groups/wg_pool/sapropos.html
 
Description LivingLongerBetter online seminar series 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact I have created an online seminar series that takes place every month where I invite academics from Oxford and around the globe to discuss their research in ageing and senescence in simple terms. The hope is to raise the awareness of ageing research among the general public. More details here: https://www.archub.ox.ac.uk/2020/06/05/new-online-seminar-series-living-longer-better/
So far 9 academics and project partners have given talks. Two more are so far scheduled.
Year(s) Of Engagement Activity 2020,2021
URL https://www.zoo.ox.ac.uk/event/living-longer-better-achieving-healthy-life-expectancy-all
 
Description Love Nature blog 
Form Of Engagement Activity Engagement focused website, blog or social media channel
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Media (as a channel to the public)
Results and Impact I was interviewed by a blogger on my research using large open-access demographic data. The blog was posted in the Love Nature blog
Year(s) Of Engagement Activity 2016
URL http://community.lovenature.com/blog/explore-the-incredible-work-of-computer-conservationists
 
Description Macro-ecology through the lens of comparative demography 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Postgraduate students
Results and Impact A 2-h workshop organised at the annual meeting of the British Ecological Society where we taught participants intro-level skills to run comparative analyses using open-access, big demographic data
Year(s) Of Engagement Activity 2016
URL https://www.britishecologicalsociety.org/bes-annual-meeting-workshops/
 
Description Modelos de proyección integral y demografía comparada 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Undergraduate students
Results and Impact I organised a weeklong course at the UNAM (Mexico) in Spanish to teach undergraduate and postgraduate students various demographic analytical techniques
Year(s) Of Engagement Activity 2017
 
Description Stage-based demographic models in ecology, evolution and conservation biology 
Form Of Engagement Activity Participation in an activity, workshop or similar
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact I organised a weeklong workshop teaching participants demographic techniques for ecology and evolution at the University of Sheffield. This workshop was hosted under the economic support of a NERC ATSC grant
Year(s) Of Engagement Activity 2018
URL https://robsalguero.wixsite.com/nercdemography
 
Description The Oxford Ageing Hub. UK SPINE 1st annual meeting 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach National
Primary Audience Policymakers/politicians
Results and Impact Launch the new Ageing Research Collaborative Hub of Oxford at UK SPINE
Year(s) Of Engagement Activity 2019
 
Description The biogeography of life history strategies 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Postgraduate students
Results and Impact Invited lecture at Stanford University to present research findings
Year(s) Of Engagement Activity 2019
 
Description Webinar demography beyond the population 
Form Of Engagement Activity A broadcast e.g. TV/radio/film/podcast (other than news/press)
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact A webinar organised with selected authors of the special feature that I edited for the British Ecological Society "Demography beyond the population". In the webinar, authors provided a general-public explanation on the important of demography for urgent questions in ecology, evolution and conservation science
Year(s) Of Engagement Activity 2016
URL https://methodsblog.wordpress.com/2016/02/17/demography-beyond-the-population-webinar/
 
Description Webinar: A repertoire of the best research carried out by the Early Career Ecologist Section of the Ecological Society of America 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact I organised a webinar highlighting the research by the winner and the runner-ups of the competition for the Award in Research Excellence I created for the Early Career Ecologist Section of the Ecological Society of America, where I was the chair in 2016-2017
Year(s) Of Engagement Activity 2017