Data-Driven Computational Methods for Cyclic Discovery Processes

Lead Research Organisation: University of Nottingham
Department Name: Sch of Chemistry

Abstract

The aim of this project is to investigate-in a challenging real-world drug discovery process-how data-driven computational methods can support discovery processes that operate in design-make-test-analyse cycles. This project promises to (i) enable effective, well-justified machine learning applications in discovery processes, (ii) drive forward research into theory and algorithms for machine learning in discovery processes, (iii) pioneer a sound data-driven approach to reduce attrition in drug discovery processes, and (iv) develop highly promising compounds for the treatment of idiopathic pulmonary fibrosis, a chronic lung disease. To ensure success, our consortium covers a wide range of expertise in data-driven computations techniques and drug discovery. The unique composition of challenges encountered in design-make-test-analyse cycles are partly general and partly domain-specific. Evaluation of novel methods in these settings is only meaningful in real-world applications as retrospective analyses cannot do justice to the complexity and flexibility of a true design phase coupled with real making and testing of structures. Therefore, the pharmaceutical companies GlaxoSmithKline and Evotec are partners in the project and we incorporate the synthesis capabilities of the University of Nottingham with their quality-assured in vitro testing capabilities.

Publications

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Studentship Projects

Project Reference Relationship Related To Start End Student Name
EP/N50970X/1 01/10/2016 30/09/2021
1851447 Studentship EP/N50970X/1 01/10/2016 30/09/2020 Steven Oatley
 
Description AI at university challenge, travel and entry to SC18
Amount £5,000 (GBP)
Organisation Lenovo Group Limited 
Sector Private
Country Hong Kong
Start 10/2018 
End 10/2018
 
Description Accelerated Discovery and Development of New Medicines: Prosperity Partnership for a Healthier Nation
Amount £5,495,023 (GBP)
Funding ID EP/S035990/1 
Organisation Engineering and Physical Sciences Research Council (EPSRC) 
Sector Public
Country United Kingdom
Start 01/2019 
End 12/2023
 
Description GSK funding for accommodation during summer placement
Amount £1,200 (GBP)
Organisation GlaxoSmithKline (GSK) 
Sector Private
Country Global
Start 07/2018 
End 09/2019
 
Description RSC-BMCS bursary for conference Integrins 19
Amount £150 (GBP)
Organisation Royal Society of Chemistry 
Sector Charity/Non Profit
Country United Kingdom
Start 03/2019 
End 03/2019
 
Description GSK 
Organisation GlaxoSmithKline (GSK)
Country Global 
Sector Private 
PI Contribution Primary research activity.
Collaborator Contribution Collaborative discussions and supervision, providing highly specialised expertise.
Impact Collaborative papers
Start Year 2016
 
Description Presentation at ICCS 2018 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Presented current work in the form of a talk at ICCS2018 in the Netherlands.
Year(s) Of Engagement Activity 2018
URL https://www.iccs-meeting.org/iccs2018/
 
Description Talk at SC18 for Lenovo 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Public/other audiences
Results and Impact Presented a talk as part of an award in the Lenovo booth at supercomputing 18.
Year(s) Of Engagement Activity 2018
URL https://sc18.supercomputing.org
 
Description Talk/Presentation at UKQSAR Biocity 
Form Of Engagement Activity A talk or presentation
Part Of Official Scheme? No
Geographic Reach International
Primary Audience Other audiences
Results and Impact Present current work relating to the project to audience members including Post/Undergraduate students, researches and members of industry.
Year(s) Of Engagement Activity 2019